RNA–Protein interactions for RNA: YMR004W

MVP1, Transcript of Protein required for sorting proteins to the vacuole, yeastyeast

Gene MVP1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MVP1YMR004W ATG38Q05789 226 aaKnown RBP1.18□□□□□ -2.22
MVP1YMR004W DIB1Q06819 143 aaPredicted RBP1.18□□□□□ -2.22
MVP1YMR004W YOL029CQ08187 201 aa1.18□□□□□ -2.22
MVP1YMR004W YCT1Q12235 531 aa1.18□□□□□ -2.22
MVP1YMR004W CHD1P32657 1468 aa1.18□□□□□ -2.22
MVP1YMR004W THP2O13539 261 aaKnown RBP1.17□□□□□ -2.22
MVP1YMR004W CDC36P06100 191 aaPredicted RBP1.17□□□□□ -2.22
MVP1YMR004W RPL4AP10664 362 aaKnown RBP1.17□□□□□ -2.22
MVP1YMR004W TCP1P12612 559 aaKnown RBP1.17□□□□□ -2.22
MVP1YMR004W OSM1P21375 501 aaKnown RBP1.17□□□□□ -2.22
MVP1YMR004W AGA2P32781 87 aa1.17□□□□□ -2.22
MVP1YMR004W MED8P38304 223 aa1.17□□□□□ -2.22
MVP1YMR004W URA8P38627 578 aaPredicted RBP1.17□□□□□ -2.22
MVP1YMR004W YHI9P38765 294 aa1.17□□□□□ -2.22
MVP1YMR004W RTC3P38804 111 aaPredicted RBP1.17□□□□□ -2.22
MVP1YMR004W KRE29P40026 464 aa1.17□□□□□ -2.22
MVP1YMR004W HAM1P47119 197 aaKnown RBP1.17□□□□□ -2.22
MVP1YMR004W YJR079WP47126 109 aa1.17□□□□□ -2.22
MVP1YMR004W JHD2P47156 728 aaPredicted RBP1.17□□□□□ -2.22
MVP1YMR004W RPL4BP49626 362 aaKnown RBP1.17□□□□□ -2.22
MVP1YMR004W USE1P53146 245 aa1.17□□□□□ -2.22
MVP1YMR004W FMP48P53233 369 aa1.17□□□□□ -2.22
MVP1YMR004W YNL095CP53932 642 aa1.17□□□□□ -2.22
MVP1YMR004W ACT1P60010 375 aaKnown RBP1.17□□□□□ -2.22
MVP1YMR004W YPL113CQ02961 396 aa1.17□□□□□ -2.22
MVP1YMR004W YMR166CQ03829 368 aa1.17□□□□□ -2.22
MVP1YMR004W DCR2Q05924 578 aa1.17□□□□□ -2.22
MVP1YMR004W SSQ1Q05931 657 aaPredicted RBP1.17□□□□□ -2.22
MVP1YMR004W DXO1Q06349 442 aa1.17□□□□□ -2.22
MVP1YMR004W ATG17Q06410 417 aa1.17□□□□□ -2.22
MVP1YMR004W YDL144CQ07589 356 aa1.17□□□□□ -2.22
MVP1YMR004W COQ10Q08058 207 aa1.17□□□□□ -2.22
MVP1YMR004W SNU23Q12368 194 aaPredicted RBP1.17□□□□□ -2.22
MVP1YMR004W GIS3Q12418 502 aa1.17□□□□□ -2.22
MVP1YMR004W DFM1Q12743 341 aaKnown RBP1.17□□□□□ -2.22
MVP1YMR004W AI5_BETAQ9ZZX0 354 aa1.17□□□□□ -2.22
MVP1YMR004W QCR6P00127 147 aa1.16□□□□□ -2.22
MVP1YMR004W CDC33P07260 213 aaKnown RBP1.16□□□□□ -2.22
MVP1YMR004W YBR121C-AP0C5L4 52 aa1.16□□□□□ -2.22
MVP1YMR004W POX1P13711 748 aa1.16□□□□□ -2.22
MVP1YMR004W KSS1P14681 368 aa1.16□□□□□ -2.22
MVP1YMR004W CPT1P17898 393 aa1.16□□□□□ -2.22
MVP1YMR004W DPB2P24482 689 aaPredicted RBP1.16□□□□□ -2.22
MVP1YMR004W YCR025CP25352 136 aa1.16□□□□□ -2.22
MVP1YMR004W YCR102CP25608 368 aa1.16□□□□□ -2.22
MVP1YMR004W CAM1P29547 415 aaKnown RBP1.16□□□□□ -2.22
MVP1YMR004W SSO1P32867 290 aa1.16□□□□□ -2.22
MVP1YMR004W JEN1P36035 616 aa1.16□□□□□ -2.22
MVP1YMR004W DBP7P36120 742 aaKnown RBP1.16□□□□□ -2.22
MVP1YMR004W YKR032WP36127 104 aa1.16□□□□□ -2.22
MVP1YMR004W RIB1P38066 345 aa1.16□□□□□ -2.22
MVP1YMR004W YBR096WP38256 230 aa1.16□□□□□ -2.22
MVP1YMR004W CUE1P38428 203 aa1.16□□□□□ -2.22
MVP1YMR004W GOS1P38736 223 aa1.16□□□□□ -2.22
MVP1YMR004W SEN34P39707 275 aa1.16□□□□□ -2.22
MVP1YMR004W PRE6P40303 254 aaKnown RBP1.16□□□□□ -2.22
MVP1YMR004W AVT7P40501 490 aa1.16□□□□□ -2.22
MVP1YMR004W PRP24P49960 444 aaKnown RBP1.16□□□□□ -2.22
MVP1YMR004W ASI3P53983 676 aa1.16□□□□□ -2.22
MVP1YMR004W SNZ1Q03148 297 aa1.16□□□□□ -2.22
MVP1YMR004W INP1Q03694 420 aa1.16□□□□□ -2.22
MVP1YMR004W YML108WQ03759 105 aa1.16□□□□□ -2.22
MVP1YMR004W YMR226CQ05016 267 aaKnown RBP1.16□□□□□ -2.22
MVP1YMR004W ECM19Q06011 112 aa1.16□□□□□ -2.22
MVP1YMR004W YPR098CQ06089 161 aa1.16□□□□□ -2.22
MVP1YMR004W CDD1Q06549 142 aa1.16□□□□□ -2.22
MVP1YMR004W HRT1Q08273 121 aa1.16□□□□□ -2.22
MVP1YMR004W YPL278CQ08990 100 aa1.16□□□□□ -2.22
MVP1YMR004W YPR063CQ12160 140 aa1.16□□□□□ -2.22
MVP1YMR004W YPL119C-AQ3E751 87 aa1.16□□□□□ -2.22
MVP1YMR004W YKL183C-AQ3E765 70 aa1.16□□□□□ -2.22
MVP1YMR004W FLO11P08640 1367 aa1.16□□□□□ -2.22
MVP1YMR004W YMR316C-AI2HB70 103 aa1.15□□□□□ -2.22
MVP1YMR004W SPT3P06844 337 aa1.15□□□□□ -2.22
MVP1YMR004W COS2P0CX12 379 aa1.15□□□□□ -2.22
MVP1YMR004W COS3P0CX13 379 aa1.15□□□□□ -2.22
MVP1YMR004W STE18P18852 110 aa1.15□□□□□ -2.22
MVP1YMR004W YMR31P19955 123 aa1.15□□□□□ -2.22
MVP1YMR004W PHO80P20052 293 aa1.15□□□□□ -2.22
MVP1YMR004W IMP1P28627 190 aa1.15□□□□□ -2.22
MVP1YMR004W MGM101P32787 269 aaKnown RBP1.15□□□□□ -2.22
MVP1YMR004W CAT2P32796 670 aaKnown RBP1.15□□□□□ -2.22
MVP1YMR004W TKL2P33315 681 aa1.15□□□□□ -2.22
MVP1YMR004W NTF2P33331 125 aaKnown RBP1.15□□□□□ -2.22
MVP1YMR004W PRP18P33411 251 aaPredicted RBP1.15□□□□□ -2.22
MVP1YMR004W ZRT3P34240 503 aa1.15□□□□□ -2.22
MVP1YMR004W HMT1P38074 348 aa1.15□□□□□ -2.22
MVP1YMR004W MAL32P38158 584 aa1.15□□□□□ -2.22
MVP1YMR004W POP8P38208 133 aa1.15□□□□□ -2.22
MVP1YMR004W YHL049CP38722 271 aa1.15□□□□□ -2.22
MVP1YMR004W YHL044WP38727 235 aa1.15□□□□□ -2.22
MVP1YMR004W ECM14P38836 430 aa1.15□□□□□ -2.22
MVP1YMR004W ASP1P38986 381 aaPredicted RBP1.15□□□□□ -2.22
MVP1YMR004W EDC2P40023 145 aaPredicted RBP1.15□□□□□ -2.22
MVP1YMR004W ERG28P40030 148 aa1.15□□□□□ -2.22
MVP1YMR004W AVT6P40074 448 aa1.15□□□□□ -2.22
MVP1YMR004W RFC4P40339 323 aaKnown RBP1.15□□□□□ -2.22
MVP1YMR004W RAD17P48581 401 aa1.15□□□□□ -2.22
MVP1YMR004W MIC26P50087 233 aa1.15□□□□□ -2.22
MVP1YMR004W SLX9P53251 210 aaPredicted RBP1.15□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms