RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C RGM1Q00453 211 aa2.37□□□□□ -2.03
VPS25YJR102C FCF1Q05498 189 aaPredicted RBP2.37□□□□□ -2.03
VPS25YJR102C RDS3Q06835 107 aaPredicted RBP2.37□□□□□ -2.03
VPS25YJR102C SLD7Q08457 257 aa2.37□□□□□ -2.03
VPS25YJR102C AGC1Q12482 902 aa2.37□□□□□ -2.03
VPS25YJR102C DPB2P24482 689 aaPredicted RBP2.36□□□□□ -2.03
VPS25YJR102C SFC1P33303 322 aa2.36□□□□□ -2.03
VPS25YJR102C MAL32P38158 584 aa2.36□□□□□ -2.03
VPS25YJR102C DSK2P48510 373 aa2.36□□□□□ -2.03
VPS25YJR102C MAL13P53338 473 aa2.36□□□□□ -2.03
VPS25YJR102C MAL12P53341 584 aa2.36□□□□□ -2.03
VPS25YJR102C ATC1Q04005 294 aa2.36□□□□□ -2.03
VPS25YJR102C SME1Q12330 94 aaPredicted RBP2.36□□□□□ -2.03
VPS25YJR102C PST1Q12355 444 aa2.36□□□□□ -2.03
VPS25YJR102C SPT8P38915 602 aa2.35□□□□□ -2.03
VPS25YJR102C ALG11P53954 548 aaKnown RBP2.35□□□□□ -2.03
VPS25YJR102C EBS1Q03466 884 aaKnown RBP2.35□□□□□ -2.03
VPS25YJR102C GRH1Q04410 372 aaKnown RBP2.35□□□□□ -2.03
VPS25YJR102C ADH6Q04894 360 aaKnown RBP2.35□□□□□ -2.03
VPS25YJR102C BTS1Q12051 335 aa2.35□□□□□ -2.03
VPS25YJR102C YPL119C-AQ3E751 87 aa2.35□□□□□ -2.03
VPS25YJR102C TOM40P23644 387 aaKnown RBP2.34□□□□□ -2.03
VPS25YJR102C PET100P38958 111 aa2.34□□□□□ -2.03
VPS25YJR102C TEM1P38987 245 aa2.34□□□□□ -2.03
VPS25YJR102C PRM9P39551 298 aa2.34□□□□□ -2.03
VPS25YJR102C BOP2Q06150 570 aa2.34□□□□□ -2.03
VPS25YJR102C COX2P00410 251 aa2.33□□□□□ -2.04
VPS25YJR102C COS2P0CX12 379 aa2.33□□□□□ -2.04
VPS25YJR102C COS3P0CX13 379 aa2.33□□□□□ -2.04
VPS25YJR102C DAL82P21705 255 aa2.33□□□□□ -2.04
VPS25YJR102C CWP1P28319 239 aa2.33□□□□□ -2.04
VPS25YJR102C RNP1P32385 249 aa2.33□□□□□ -2.04
VPS25YJR102C RPL10P41805 221 aaKnown RBP2.33□□□□□ -2.04
VPS25YJR102C AGX1P43567 385 aa2.33□□□□□ -2.04
VPS25YJR102C GON7P46984 123 aa2.33□□□□□ -2.04
VPS25YJR102C AAH1P53909 347 aa2.33□□□□□ -2.04
VPS25YJR102C YDR209CQ03480 137 aa2.33□□□□□ -2.04
VPS25YJR102C CTS2Q06350 511 aa2.33□□□□□ -2.04
VPS25YJR102C PLB3Q08108 686 aa2.33□□□□□ -2.04
VPS25YJR102C YOL107WQ12239 342 aa2.33□□□□□ -2.04
VPS25YJR102C SMT3Q12306 101 aaKnown RBP2.33□□□□□ -2.04
VPS25YJR102C YPL247CQ12523 523 aa2.33□□□□□ -2.04
VPS25YJR102C POX1P13711 748 aa2.32□□□□□ -2.04
VPS25YJR102C POL30P15873 258 aaKnown RBP2.32□□□□□ -2.04
VPS25YJR102C EMI1Q04406 187 aa2.32□□□□□ -2.04
VPS25YJR102C YMR114CQ04471 368 aaKnown RBP2.32□□□□□ -2.04
VPS25YJR102C KAP95Q06142 861 aaKnown RBP2.32□□□□□ -2.04
VPS25YJR102C SUE1Q06524 206 aa2.32□□□□□ -2.04
VPS25YJR102C RRP36Q12481 300 aaPredicted RBP2.32□□□□□ -2.04
VPS25YJR102C SNF6P18888 332 aa2.31□□□□□ -2.04
VPS25YJR102C VPS3P23643 1011 aa2.31□□□□□ -2.04
VPS25YJR102C QRI5P32344 111 aa2.31□□□□□ -2.04
VPS25YJR102C GDH2P33327 1092 aaKnown RBP2.31□□□□□ -2.04
VPS25YJR102C PRS2P38620 318 aaKnown RBP2.31□□□□□ -2.04
VPS25YJR102C MDM34P53083 459 aa2.31□□□□□ -2.04
VPS25YJR102C MYO5Q04439 1219 aaKnown RBP2.31□□□□□ -2.04
VPS25YJR102C SPO77Q06134 477 aa2.31□□□□□ -2.04
VPS25YJR102C YOR268CQ08734 132 aa2.31□□□□□ -2.04
VPS25YJR102C YPR011CQ12251 326 aa2.31□□□□□ -2.04
VPS25YJR102C GEP5Q12393 293 aa2.31□□□□□ -2.04
VPS25YJR102C YBL008W-AQ3E821 79 aa2.31□□□□□ -2.04
VPS25YJR102C RAD3P06839 778 aa2.3□□□□□ -2.04
VPS25YJR102C YHR045WP38775 560 aa2.3□□□□□ -2.04
VPS25YJR102C DSN1P40568 576 aa2.3□□□□□ -2.04
VPS25YJR102C YPR147CQ06522 304 aaKnown RBP2.3□□□□□ -2.04
VPS25YJR102C TY3A-GQ12173 290 aa2.3□□□□□ -2.04
VPS25YJR102C NOT5Q12514 560 aaPredicted RBP2.3□□□□□ -2.04
VPS25YJR102C TY3A-IQ99219 290 aa2.3□□□□□ -2.04
VPS25YJR102C DPM1P14020 267 aaKnown RBP2.29□□□□□ -2.04
VPS25YJR102C SSH1P38353 490 aaKnown RBP2.29□□□□□ -2.04
VPS25YJR102C ASI3P53983 676 aa2.29□□□□□ -2.04
VPS25YJR102C ATG17Q06410 417 aa2.29□□□□□ -2.04
VPS25YJR102C INO80P53115 1489 aa2.28□□□□□ -2.04
VPS25YJR102C RPL26AP05743 127 aaKnown RBP2.28□□□□□ -2.04
VPS25YJR102C RSR1P13856 272 aa2.28□□□□□ -2.04
VPS25YJR102C YUH1P35127 236 aa2.28□□□□□ -2.04
VPS25YJR102C JEN1P36035 616 aa2.28□□□□□ -2.04
VPS25YJR102C ECM13P38195 257 aa2.28□□□□□ -2.04
VPS25YJR102C YGP1P38616 354 aaKnown RBP2.28□□□□□ -2.04
VPS25YJR102C BIG1P38813 335 aa2.28□□□□□ -2.04
VPS25YJR102C YAR1P46683 200 aa2.28□□□□□ -2.04
VPS25YJR102C YJR146WP47174 117 aa2.28□□□□□ -2.04
VPS25YJR102C RPL26BP53221 127 aaKnown RBP2.28□□□□□ -2.04
VPS25YJR102C SLM2P53955 656 aa2.28□□□□□ -2.04
VPS25YJR102C YLR179CQ06252 201 aaKnown RBP2.28□□□□□ -2.04
VPS25YJR102C PPH21P23594 369 aa2.27□□□□□ -2.05
VPS25YJR102C CLB6P32943 380 aa2.27□□□□□ -2.05
VPS25YJR102C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
VPS25YJR102C YJL016WP47072 561 aa2.27□□□□□ -2.05
VPS25YJR102C RRT8Q08219 342 aa2.27□□□□□ -2.05
VPS25YJR102C VPS68Q12016 184 aa2.27□□□□□ -2.05
VPS25YJR102C DRE2P36152 348 aa2.26□□□□□ -2.05
VPS25YJR102C SMB1P40018 196 aaKnown RBP2.26□□□□□ -2.05
VPS25YJR102C COG3P40094 801 aa2.26□□□□□ -2.05
VPS25YJR102C MNN5P46982 586 aa2.26□□□□□ -2.05
VPS25YJR102C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
VPS25YJR102C GOT1Q03554 138 aa2.26□□□□□ -2.05
VPS25YJR102C YPR098CQ06089 161 aa2.26□□□□□ -2.05
VPS25YJR102C SWI1P09547 1314 aa2.25□□□□□ -2.05
VPS25YJR102C FKS1P38631 1876 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 77.3 ms