RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSP1	YJL041W	BEM1	P29366	551 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	YBR063C	P38083	404 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	MTC4	P38335	694 aa	Known RBP	3.21	□□□□□ -1.9
NSP1	YJL041W	DOG2	P38773	246 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	HSP10	P38910	106 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	JHD1	P40034	492 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	TAH11	P47112	604 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	TAD1	P53065	400 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	JAC1	P53193	184 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	YKR011C	Q02209	353 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	YVH1	Q02256	364 aa	Known RBP	3.21	□□□□□ -1.9
NSP1	YJL041W	YPL067C	Q02754	198 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	PRM6	Q04705	352 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	RSF1	Q05043	376 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	MRX8	Q05473	314 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	YGK3	Q12222	375 aa	Predicted RBP	3.21	□□□□□ -1.9
NSP1	YJL041W	YDR262W	Q12331	272 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	RRD2	Q12461	358 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	MHT1	Q12525	324 aa		3.21	□□□□□ -1.9
NSP1	YJL041W	SAL1	D6W196	494 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	STE18	P18852	110 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	UBC8	P28263	218 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	FMT1	P32785	401 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	SFC1	P33303	322 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	MTH1	P35198	433 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	YBR071W	P38243	211 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	NDT80	P38830	627 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	GCV3	P39726	170 aa	Predicted RBP	3.2	□□□□□ -1.9
NSP1	YJL041W	NPP2	P39997	493 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	COX15	P40086	486 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	PUG1	P40100	303 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	GPP1	P41277	250 aa	Known RBP	3.2	□□□□□ -1.9
NSP1	YJL041W	YFL052W	P43551	465 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	ALK1	P43633	760 aa	Known RBP	3.2	□□□□□ -1.9
NSP1	YJL041W	HIT1	P46973	164 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	YJR096W	P47137	282 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	YGL138C	P53122	345 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	YGL114W	P53134	725 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	SUR7	P54003	302 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	UBC7	Q02159	165 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	RCE1	Q03530	315 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	GMC1	Q04399	608 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	TMN2	Q04562	672 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	NAT4	Q04751	285 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	CUR1	Q06469	252 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	BER1	Q06688	274 aa	Known RBP	3.2	□□□□□ -1.9
NSP1	YJL041W	YOL131W	Q08270	108 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	HUT1	Q12520	339 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	YPR014C	Q6B0W2	109 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	TY4B-H	P0C2J7	1802 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	TY4B-J	P47024	1803 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	TFS1	P14306	219 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	SYN8	P31377	255 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	SKG6	P32900	734 aa	Predicted RBP	3.2	□□□□□ -1.9
NSP1	YJL041W	YKL187C	P34231	750 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	YKR051W	P36142	418 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	CUE1	P38428	203 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	ARP1	P38696	384 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	ASP1	P38986	381 aa	Predicted RBP	3.2	□□□□□ -1.9
NSP1	YJL041W	AVT2	P39981	480 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	FMP52	P40008	231 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	PAN6	P40459	309 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	SMK1	P41808	388 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	BIO3	P50277	480 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	RIB4	P50861	169 aa	Predicted RBP	3.2	□□□□□ -1.9
NSP1	YJL041W	PHO23	P50947	330 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	NPY1	P53164	384 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	DUO1	P53168	247 aa	Known RBP	3.2	□□□□□ -1.9
NSP1	YJL041W	GTR2	P53290	341 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	SAY1	P53324	424 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	NUP100	Q02629	959 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	AVO2	Q04749	426 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	YMR034C	Q05131	434 aa	Predicted RBP	3.2	□□□□□ -1.9
NSP1	YJL041W	BSC6	Q08280	497 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	RRG7	Q08774	242 aa	Predicted RBP	3.2	□□□□□ -1.9
NSP1	YJL041W	NBP2	Q12163	236 aa		3.2	□□□□□ -1.9
NSP1	YJL041W	TIR4	Q12218	487 aa	Predicted RBP	3.2	□□□□□ -1.9
NSP1	YJL041W	RPB3	P16370	318 aa	Known RBP	3.19	□□□□□ -1.9
NSP1	YJL041W	SAM2	P19358	384 aa	Known RBP	3.19	□□□□□ -1.9
NSP1	YJL041W	STE50	P25344	346 aa		3.19	□□□□□ -1.9
NSP1	YJL041W	MSS51	P32335	436 aa		3.19	□□□□□ -1.9
NSP1	YJL041W	MUD1	P32605	298 aa	Known RBP	3.19	□□□□□ -1.9
NSP1	YJL041W	SLC1	P33333	303 aa		3.19	□□□□□ -1.9
NSP1	YJL041W	MRPS9	P38120	278 aa		3.19	□□□□□ -1.9
NSP1	YJL041W	FYV4	P38783	130 aa	Predicted RBP	3.19	□□□□□ -1.9
NSP1	YJL041W	SPC25	P40014	221 aa		3.19	□□□□□ -1.9
NSP1	YJL041W	RPL13B	P40212	199 aa	Known RBP	3.19	□□□□□ -1.9
NSP1	YJL041W	RMD8	P43620	662 aa		3.19	□□□□□ -1.9
NSP1	YJL041W	MEP3	P53390	489 aa		3.19	□□□□□ -1.9
NSP1	YJL041W	FMP41	P53889	259 aa	Known RBP	3.19	□□□□□ -1.9
NSP1	YJL041W	ARG5,6	Q01217	863 aa		3.19	□□□□□ -1.9
NSP1	YJL041W	AIM34	Q03673	198 aa		3.19	□□□□□ -1.9
NSP1	YJL041W	YDR391C	Q04170	232 aa		3.19	□□□□□ -1.9
NSP1	YJL041W	LOA1	Q06508	300 aa		3.19	□□□□□ -1.9
NSP1	YJL041W	PLB3	Q08108	686 aa		3.19	□□□□□ -1.9
NSP1	YJL041W	YOR365C	Q08844	703 aa		3.19	□□□□□ -1.9
NSP1	YJL041W	FSF1	Q12029	327 aa	Known RBP	3.19	□□□□□ -1.9
NSP1	YJL041W	PST1	Q12355	444 aa		3.19	□□□□□ -1.9
NSP1	YJL041W	YNR034W-A	Q3E841	98 aa		3.19	□□□□□ -1.9
NSP1	YJL041W	YBR182C-A	Q8TGU6	64 aa		3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms