RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C HCH1P53834 153 aa4.28□□□□□ -1.72
PAN1YIR006C ERG13P54839 491 aaKnown RBP4.28□□□□□ -1.72
PAN1YIR006C NUP53Q03790 475 aa4.28□□□□□ -1.72
PAN1YIR006C TDH3P00359 332 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
PAN1YIR006C URA5P13298 226 aaKnown RBP4.27□□□□□ -1.73
PAN1YIR006C HAP4P14064 554 aa4.27□□□□□ -1.73
PAN1YIR006C CDC26P14724 124 aa4.27□□□□□ -1.73
PAN1YIR006C PDX1P16451 410 aa4.27□□□□□ -1.73
PAN1YIR006C GLK1P17709 500 aaKnown RBP4.27□□□□□ -1.73
PAN1YIR006C IMG2P25642 146 aaPredicted RBP4.27□□□□□ -1.73
PAN1YIR006C YKL071WP36086 256 aa4.27□□□□□ -1.73
PAN1YIR006C LSM4P40070 187 aaKnown RBP4.27□□□□□ -1.73
PAN1YIR006C MNN10P50108 393 aaKnown RBP4.27□□□□□ -1.73
PAN1YIR006C AVT4P50944 713 aa4.27□□□□□ -1.73
PAN1YIR006C YGR035CP53222 116 aa4.27□□□□□ -1.73
PAN1YIR006C SLX9P53251 210 aaPredicted RBP4.27□□□□□ -1.73
PAN1YIR006C SCW4P53334 386 aaKnown RBP4.27□□□□□ -1.73
PAN1YIR006C PLB2Q03674 706 aa4.27□□□□□ -1.73
PAN1YIR006C YDR249CQ03787 373 aa4.27□□□□□ -1.73
PAN1YIR006C THI73Q07904 523 aa4.27□□□□□ -1.73
PAN1YIR006C YLR111WQ12528 110 aa4.27□□□□□ -1.73
PAN1YIR006C ATG40Q99325 256 aa4.27□□□□□ -1.73
PAN1YIR006C Q0182Q9ZZW1 134 aa4.27□□□□□ -1.73
PAN1YIR006C HNM1P19807 563 aa4.27□□□□□ -1.73
PAN1YIR006C STP22P25604 385 aa4.27□□□□□ -1.73
PAN1YIR006C ALK2P32789 676 aaPredicted RBP4.27□□□□□ -1.73
PAN1YIR006C TED1P40533 473 aa4.27□□□□□ -1.73
PAN1YIR006C ADO1P47143 340 aaKnown RBP4.27□□□□□ -1.73
PAN1YIR006C AAH1P53909 347 aa4.27□□□□□ -1.73
PAN1YIR006C SNT309Q06091 175 aaPredicted RBP4.27□□□□□ -1.73
PAN1YIR006C TAZ1Q06510 381 aa4.27□□□□□ -1.73
PAN1YIR006C YHR213W-AQ8TGT4 77 aa4.27□□□□□ -1.73
PAN1YIR006C YAL064W-BO13512 126 aa4.27□□□□□ -1.73
PAN1YIR006C CYC1P00044 109 aaPredicted RBP4.27□□□□□ -1.73
PAN1YIR006C FUN14P18411 198 aa4.27□□□□□ -1.73
PAN1YIR006C CPR4P25334 318 aa4.27□□□□□ -1.73
PAN1YIR006C MKK2P32491 506 aa4.27□□□□□ -1.73
PAN1YIR006C TIM12P32830 109 aa4.27□□□□□ -1.73
PAN1YIR006C PEX7P39108 375 aa4.27□□□□□ -1.73
PAN1YIR006C POG1P40473 351 aa4.27□□□□□ -1.73
PAN1YIR006C ERJ5P43613 295 aaPredicted RBP4.27□□□□□ -1.73
PAN1YIR006C YGL117WP53133 265 aa4.27□□□□□ -1.73
PAN1YIR006C MAL12P53341 584 aa4.27□□□□□ -1.73
PAN1YIR006C ADD37Q03233 198 aa4.27□□□□□ -1.73
PAN1YIR006C ROT1Q03691 256 aa4.27□□□□□ -1.73
PAN1YIR006C MIX14Q04341 121 aa4.27□□□□□ -1.73
PAN1YIR006C SEC13Q04491 297 aaKnown RBP4.27□□□□□ -1.73
PAN1YIR006C INP53Q12271 1107 aa4.27□□□□□ -1.73
PAN1YIR006C SMT3Q12306 101 aaKnown RBP4.27□□□□□ -1.73
PAN1YIR006C DCN1Q12395 269 aa4.27□□□□□ -1.73
PAN1YIR006C HKR1P41809 1802 aa4.27□□□□□ -1.73
PAN1YIR006C MOT1P32333 1867 aa4.27□□□□□ -1.73
PAN1YIR006C CBP6P07253 162 aaPredicted RBP4.26□□□□□ -1.73
PAN1YIR006C GLR1P41921 483 aaKnown RBP4.26□□□□□ -1.73
PAN1YIR006C UBC9P50623 157 aaPredicted RBP4.26□□□□□ -1.73
PAN1YIR006C CTL1Q03220 320 aaKnown RBP4.26□□□□□ -1.73
PAN1YIR006C YPR109WQ06104 294 aa4.26□□□□□ -1.73
PAN1YIR006C NMA1Q06178 401 aaKnown RBP4.26□□□□□ -1.73
PAN1YIR006C YHR214C-DP0CX93 97 aa4.26□□□□□ -1.73
PAN1YIR006C RFA2P26754 273 aaKnown RBP4.26□□□□□ -1.73
PAN1YIR006C MCM10P32354 571 aa4.26□□□□□ -1.73
PAN1YIR006C TCA17P32613 152 aa4.26□□□□□ -1.73
PAN1YIR006C KKQ8P36004 724 aa4.26□□□□□ -1.73
PAN1YIR006C ERV15P38312 142 aa4.26□□□□□ -1.73
PAN1YIR006C YAL037WP39728 267 aa4.26□□□□□ -1.73
PAN1YIR006C PCL7P40186 285 aa4.26□□□□□ -1.73
PAN1YIR006C REE1P40893 198 aa4.26□□□□□ -1.73
PAN1YIR006C VMA21P41806 77 aa4.26□□□□□ -1.73
PAN1YIR006C SLS1P42900 643 aa4.26□□□□□ -1.73
PAN1YIR006C TOS2P50078 622 aa4.26□□□□□ -1.73
PAN1YIR006C SDH1Q00711 640 aa4.26□□□□□ -1.73
PAN1YIR006C BSP1Q06604 576 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-DR4O74302 440 aa4.26□□□□□ -1.73
PAN1YIR006C HOP09932 586 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-HP0C2I4 478 aaKnown RBP4.26□□□□□ -1.73
PAN1YIR006C TY1A-LR4P0C2I8 440 aaKnown RBP4.26□□□□□ -1.73
PAN1YIR006C TY1A-AP0CX57 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-PR1P0CX58 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-ORP0CX59 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-PR2P0CX60 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-DR5P0CX65 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-ER2P0CX66 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-GR3P0CX67 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-LR1P0CX68 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-MR2P0CX69 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-DR6P0CX70 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-ER1P0CX71 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-LR2P0CX72 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-PLP0CX73 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-JR1P0CX74 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-LR3P0CX75 440 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-ML2P0CX76 440 aa4.26□□□□□ -1.73
PAN1YIR006C NEM1P38757 446 aa4.26□□□□□ -1.73
PAN1YIR006C SMK1P41808 388 aa4.26□□□□□ -1.73
PAN1YIR006C IKS1P47042 667 aa4.26□□□□□ -1.73
PAN1YIR006C TY1A-JR2P47099 440 aa4.26□□□□□ -1.73
PAN1YIR006C CCC1P47818 322 aa4.26□□□□□ -1.73
PAN1YIR006C YGL262WP53054 175 aa4.26□□□□□ -1.73
PAN1YIR006C TUB4P53378 473 aa4.26□□□□□ -1.73
PAN1YIR006C YMR279CQ03263 540 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms