RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C DAL82P21705 255 aa1.93□□□□□ -2.1
PRP38YGR075C ERG2P32352 222 aa1.93□□□□□ -2.1
PRP38YGR075C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
PRP38YGR075C YBL081WP38180 368 aaKnown RBP1.93□□□□□ -2.1
PRP38YGR075C PHO89P38361 574 aa1.93□□□□□ -2.1
PRP38YGR075C PRS2P38620 318 aaKnown RBP1.93□□□□□ -2.1
PRP38YGR075C DSN1P40568 576 aa1.93□□□□□ -2.1
PRP38YGR075C BUD13P46947 266 aaPredicted RBP1.93□□□□□ -2.1
PRP38YGR075C MAL13P53338 473 aa1.93□□□□□ -2.1
PRP38YGR075C SWT21P53873 357 aaPredicted RBP1.93□□□□□ -2.1
PRP38YGR075C TVP15Q03860 143 aa1.93□□□□□ -2.1
PRP38YGR075C YLR173WQ06247 608 aa1.93□□□□□ -2.1
PRP38YGR075C YOL107WQ12239 342 aa1.93□□□□□ -2.1
PRP38YGR075C IES3Q12345 250 aa1.93□□□□□ -2.1
PRP38YGR075C ATG5Q12380 294 aa1.93□□□□□ -2.1
PRP38YGR075C YRF1-1P0CX20 1796 aa1.93□□□□□ -2.1
PRP38YGR075C YRF1-5P0CX21 1796 aa1.93□□□□□ -2.1
PRP38YGR075C YRF1-8P0CX22 1796 aa1.93□□□□□ -2.1
PRP38YGR075C MRP1P10662 321 aaKnown RBP1.92□□□□□ -2.1
PRP38YGR075C RPL4AP10664 362 aaKnown RBP1.92□□□□□ -2.1
PRP38YGR075C KRE1P17260 313 aa1.92□□□□□ -2.1
PRP38YGR075C PRS4P38063 326 aaPredicted RBP1.92□□□□□ -2.1
PRP38YGR075C HMT1P38074 348 aa1.92□□□□□ -2.1
PRP38YGR075C MRX3P38172 270 aa1.92□□□□□ -2.1
PRP38YGR075C TRM7P38238 310 aaKnown RBP1.92□□□□□ -2.1
PRP38YGR075C RPE1P46969 238 aa1.92□□□□□ -2.1
PRP38YGR075C YJR012CP47087 207 aa1.92□□□□□ -2.1
PRP38YGR075C RPL4BP49626 362 aaKnown RBP1.92□□□□□ -2.1
PRP38YGR075C YNL095CP53932 642 aa1.92□□□□□ -2.1
PRP38YGR075C YDR114CQ04597 100 aa1.92□□□□□ -2.1
PRP38YGR075C SDO1Q07953 250 aaKnown RBP1.92□□□□□ -2.1
PRP38YGR075C BTS1Q12051 335 aa1.92□□□□□ -2.1
PRP38YGR075C PRR2Q12310 699 aa1.92□□□□□ -2.1
PRP38YGR075C RAD3P06839 778 aa1.91□□□□□ -2.1
PRP38YGR075C COS2P0CX12 379 aa1.91□□□□□ -2.1
PRP38YGR075C COS3P0CX13 379 aa1.91□□□□□ -2.1
PRP38YGR075C ZWF1P11412 505 aaKnown RBP1.91□□□□□ -2.1
PRP38YGR075C CWP1P28319 239 aa1.91□□□□□ -2.1
PRP38YGR075C YKR032WP36127 104 aa1.91□□□□□ -2.1
PRP38YGR075C YGP1P38616 354 aaKnown RBP1.91□□□□□ -2.1
PRP38YGR075C BIG1P38813 335 aa1.91□□□□□ -2.1
PRP38YGR075C YER084WP40057 128 aa1.91□□□□□ -2.1
PRP38YGR075C RPL10P41805 221 aaKnown RBP1.91□□□□□ -2.1
PRP38YGR075C ECO1P43605 281 aa1.91□□□□□ -2.1
PRP38YGR075C NBP1P52919 319 aaPredicted RBP1.91□□□□□ -2.1
PRP38YGR075C RSM27P53305 110 aa1.91□□□□□ -2.1
PRP38YGR075C YNL134CP53912 376 aaKnown RBP1.91□□□□□ -2.1
PRP38YGR075C SRL4Q03085 281 aa1.91□□□□□ -2.1
PRP38YGR075C MED4Q12343 284 aa1.91□□□□□ -2.1
PRP38YGR075C SNF8Q12483 233 aa1.91□□□□□ -2.1
PRP38YGR075C PAN1P32521 1480 aa1.9□□□□□ -2.11
PRP38YGR075C UFD4P33202 1483 aa1.9□□□□□ -2.11
PRP38YGR075C QRI5P32344 111 aa1.9□□□□□ -2.11
PRP38YGR075C CSG2P35206 410 aa1.9□□□□□ -2.11
PRP38YGR075C HEK2P38199 381 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
PRP38YGR075C YHL049CP38722 271 aa1.9□□□□□ -2.11
PRP38YGR075C ARN2P38724 620 aa1.9□□□□□ -2.11
PRP38YGR075C SUR2P38992 349 aa1.9□□□□□ -2.11
PRP38YGR075C BNA6P43619 295 aa1.9□□□□□ -2.11
PRP38YGR075C OST3P48439 350 aa1.9□□□□□ -2.11
PRP38YGR075C SLX9P53251 210 aaPredicted RBP1.9□□□□□ -2.11
PRP38YGR075C YPL039WQ03080 316 aa1.9□□□□□ -2.11
PRP38YGR075C NUM1Q00402 2748 aa1.9□□□□□ -2.11
PRP38YGR075C BEM2P39960 2167 aaKnown RBP1.89□□□□□ -2.11
PRP38YGR075C VPS15P22219 1454 aa1.89□□□□□ -2.11
PRP38YGR075C SNF6P18888 332 aa1.89□□□□□ -2.11
PRP38YGR075C RNA15P25299 296 aaPredicted RBP1.89□□□□□ -2.11
PRP38YGR075C EHD3P28817 500 aa1.89□□□□□ -2.11
PRP38YGR075C BMH1P29311 267 aaKnown RBP1.89□□□□□ -2.11
PRP38YGR075C YHR045WP38775 560 aa1.89□□□□□ -2.11
PRP38YGR075C SPL2P38839 148 aa1.89□□□□□ -2.11
PRP38YGR075C SMB1P40018 196 aaKnown RBP1.89□□□□□ -2.11
PRP38YGR075C ALG9P53868 555 aaKnown RBP1.89□□□□□ -2.11
PRP38YGR075C EBS1Q03466 884 aaKnown RBP1.89□□□□□ -2.11
PRP38YGR075C FEX1Q08913 375 aa1.89□□□□□ -2.11
PRP38YGR075C CSM4Q08955 156 aa1.89□□□□□ -2.11
PRP38YGR075C FEX2Q08991 375 aa1.89□□□□□ -2.11
PRP38YGR075C MSH5Q12175 901 aa1.89□□□□□ -2.11
PRP38YGR075C YOR029WQ12243 111 aa1.89□□□□□ -2.11
PRP38YGR075C ATG31Q12421 196 aa1.89□□□□□ -2.11
PRP38YGR075C MRX4Q12467 430 aa1.89□□□□□ -2.11
PRP38YGR075C YPL119C-AQ3E751 87 aa1.89□□□□□ -2.11
PRP38YGR075C YBL112CQ3E7Y4 105 aa1.89□□□□□ -2.11
PRP38YGR075C SCC2Q04002 1493 aa1.88□□□□□ -2.11
PRP38YGR075C TY1B-BRQ12193 1756 aa1.88□□□□□ -2.11
PRP38YGR075C TY1B-GR3Q12316 1755 aa1.88□□□□□ -2.11
PRP38YGR075C TY1B-ORQ92393 1755 aa1.88□□□□□ -2.11
PRP38YGR075C VPS3P23643 1011 aa1.88□□□□□ -2.11
PRP38YGR075C HOM6P31116 359 aaKnown RBP1.88□□□□□ -2.11
PRP38YGR075C MED6P38782 295 aa1.88□□□□□ -2.11
PRP38YGR075C SPT8P38915 602 aa1.88□□□□□ -2.11
PRP38YGR075C FMC1P40491 155 aa1.88□□□□□ -2.11
PRP38YGR075C AGX1P43567 385 aa1.88□□□□□ -2.11
PRP38YGR075C GLG2P47011 380 aa1.88□□□□□ -2.11
PRP38YGR075C NUP84P52891 726 aa1.88□□□□□ -2.11
PRP38YGR075C MIG2P53035 382 aa1.88□□□□□ -2.11
PRP38YGR075C AAH1P53909 347 aa1.88□□□□□ -2.11
PRP38YGR075C YDR209CQ03480 137 aa1.88□□□□□ -2.11
PRP38YGR075C YMR166CQ03829 368 aa1.88□□□□□ -2.11
PRP38YGR075C PEX10Q05568 337 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms