RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W YBR096WP38256 230 aa7.35□□□□□ -1.23
UFD1YGR048W YER158CP40095 573 aa7.35□□□□□ -1.23
UFD1YGR048W LRO1P40345 661 aa7.35□□□□□ -1.23
UFD1YGR048W YIL152WP40455 235 aa7.35□□□□□ -1.23
UFD1YGR048W YDL183CP48569 320 aa7.35□□□□□ -1.23
UFD1YGR048W TRM9P49957 279 aa7.35□□□□□ -1.23
UFD1YGR048W YNR066CP53752 436 aa7.35□□□□□ -1.23
UFD1YGR048W RSM23Q01163 450 aa7.35□□□□□ -1.23
UFD1YGR048W YML096WQ04489 525 aa7.35□□□□□ -1.23
UFD1YGR048W CRF1Q04930 467 aa7.35□□□□□ -1.23
UFD1YGR048W ECM7Q06200 448 aa7.35□□□□□ -1.23
UFD1YGR048W TEN1Q07921 160 aa7.35□□□□□ -1.23
UFD1YGR048W COQ10Q08058 207 aa7.35□□□□□ -1.23
UFD1YGR048W PRS5Q12265 496 aaKnown RBP7.35□□□□□ -1.23
UFD1YGR048W GSC2P40989 1895 aa7.34□□□□□ -1.23
UFD1YGR048W AI3P03877 415 aa7.34□□□□□ -1.23
UFD1YGR048W RPS25BP0C0T4 108 aaKnown RBP7.34□□□□□ -1.23
UFD1YGR048W ADH7P25377 361 aa7.34□□□□□ -1.23
UFD1YGR048W ATS1P31386 333 aa7.34□□□□□ -1.23
UFD1YGR048W SEC17P32602 292 aa7.34□□□□□ -1.23
UFD1YGR048W SKN1P33336 771 aa7.34□□□□□ -1.23
UFD1YGR048W YPC1P38298 316 aa7.34□□□□□ -1.23
UFD1YGR048W AME1P38313 324 aa7.34□□□□□ -1.23
UFD1YGR048W GPI16P38875 610 aa7.34□□□□□ -1.23
UFD1YGR048W PTH1P38876 190 aaKnown RBP7.34□□□□□ -1.23
UFD1YGR048W VAC8P39968 578 aa7.34□□□□□ -1.23
UFD1YGR048W SPC25P40014 221 aa7.34□□□□□ -1.23
UFD1YGR048W YER188WP40103 239 aa7.34□□□□□ -1.23
UFD1YGR048W QRI7P43122 407 aa7.34□□□□□ -1.23
UFD1YGR048W RPN11P43588 306 aaKnown RBP7.34□□□□□ -1.23
UFD1YGR048W IBA57P47158 497 aa7.34□□□□□ -1.23
UFD1YGR048W SUT1P53032 299 aaKnown RBP7.34□□□□□ -1.23
UFD1YGR048W PNC1P53184 216 aaKnown RBP7.34□□□□□ -1.23
UFD1YGR048W YAF9P53930 226 aa7.34□□□□□ -1.23
UFD1YGR048W NAT4Q04751 285 aa7.34□□□□□ -1.23
UFD1YGR048W RNH202Q05635 350 aa7.34□□□□□ -1.23
UFD1YGR048W CTS2Q06350 511 aa7.34□□□□□ -1.23
UFD1YGR048W ATG10Q07879 167 aa7.34□□□□□ -1.23
UFD1YGR048W COX19Q3E731 98 aa7.34□□□□□ -1.23
UFD1YGR048W RPS25AQ3E792 108 aaPredicted RBP7.34□□□□□ -1.23
UFD1YGR048W COX2P00410 251 aa7.33□□□□□ -1.24
UFD1YGR048W ILV5P06168 395 aaKnown RBP7.33□□□□□ -1.24
UFD1YGR048W RIP1P08067 215 aa7.33□□□□□ -1.24
UFD1YGR048W MSN1P22148 382 aa7.33□□□□□ -1.24
UFD1YGR048W RPI1P23250 407 aaKnown RBP7.33□□□□□ -1.24
UFD1YGR048W STP22P25604 385 aa7.33□□□□□ -1.24
UFD1YGR048W TIP1P27654 210 aaPredicted RBP7.33□□□□□ -1.24
UFD1YGR048W PAU24P38155 120 aa7.33□□□□□ -1.24
UFD1YGR048W BNA4P38169 460 aa7.33□□□□□ -1.24
UFD1YGR048W YBR220CP38318 560 aa7.33□□□□□ -1.24
UFD1YGR048W TRS20P38334 175 aa7.33□□□□□ -1.24
UFD1YGR048W CUE1P38428 203 aa7.33□□□□□ -1.24
UFD1YGR048W PAU12P53343 120 aa7.33□□□□□ -1.24
UFD1YGR048W BNA5Q05979 453 aa7.33□□□□□ -1.24
UFD1YGR048W SHS1Q07657 551 aa7.33□□□□□ -1.24
UFD1YGR048W YOR385WQ08909 290 aa7.33□□□□□ -1.24
UFD1YGR048W ERP3Q12403 225 aa7.33□□□□□ -1.24
UFD1YGR048W PCL9Q12477 304 aa7.33□□□□□ -1.24
UFD1YGR048W COX3P00420 269 aa7.32□□□□□ -1.24
UFD1YGR048W DED1P06634 604 aaKnown RBP7.32□□□□□ -1.24
UFD1YGR048W NHP6AP11632 93 aaKnown RBP7.32□□□□□ -1.24
UFD1YGR048W SLM5P25345 492 aaKnown RBP7.32□□□□□ -1.24
UFD1YGR048W TIP20P33891 701 aa7.32□□□□□ -1.24
UFD1YGR048W MRPS9P38120 278 aa7.32□□□□□ -1.24
UFD1YGR048W RIB5P38145 238 aa7.32□□□□□ -1.24
UFD1YGR048W YIL165CP40446 119 aa7.32□□□□□ -1.24
UFD1YGR048W AVT7P40501 490 aa7.32□□□□□ -1.24
UFD1YGR048W RPS10BP46784 105 aaKnown RBP7.32□□□□□ -1.24
UFD1YGR048W MZM1Q03429 123 aaPredicted RBP7.32□□□□□ -1.24
UFD1YGR048W GMC1Q04399 608 aa7.32□□□□□ -1.24
UFD1YGR048W ELP6Q04868 273 aa7.32□□□□□ -1.24
UFD1YGR048W YDR286CQ05530 114 aa7.32□□□□□ -1.24
UFD1YGR048W PEX30Q06169 523 aa7.32□□□□□ -1.24
UFD1YGR048W IRC10Q08118 586 aa7.32□□□□□ -1.24
UFD1YGR048W RPS10AQ08745 105 aaPredicted RBP7.32□□□□□ -1.24
UFD1YGR048W FCF2Q12035 217 aaPredicted RBP7.32□□□□□ -1.24
UFD1YGR048W YDR215CQ12240 137 aa7.32□□□□□ -1.24
UFD1YGR048W ICT1Q12385 394 aa7.32□□□□□ -1.24
UFD1YGR048W TFB5Q3E7C1 72 aaPredicted RBP7.32□□□□□ -1.24
UFD1YGR048W GDH1P07262 454 aaKnown RBP7.31□□□□□ -1.24
UFD1YGR048W YPR170W-BP0C5R9 85 aa7.31□□□□□ -1.24
UFD1YGR048W TY2A-FP0CX61 438 aa7.31□□□□□ -1.24
UFD1YGR048W TY2A-GR2P0CX62 438 aa7.31□□□□□ -1.24
UFD1YGR048W SST2P11972 698 aaKnown RBP7.31□□□□□ -1.24
UFD1YGR048W RPB10P22139 70 aa7.31□□□□□ -1.24
UFD1YGR048W ARO2P28777 376 aaKnown RBP7.31□□□□□ -1.24
UFD1YGR048W YPT53P36019 220 aa7.31□□□□□ -1.24
UFD1YGR048W PMU1P36069 295 aa7.31□□□□□ -1.24
UFD1YGR048W LDB7P38210 180 aa7.31□□□□□ -1.24
UFD1YGR048W PFS1P38872 237 aa7.31□□□□□ -1.24
UFD1YGR048W BDH1P39714 382 aa7.31□□□□□ -1.24
UFD1YGR048W IRC22P40006 225 aa7.31□□□□□ -1.24
UFD1YGR048W LYS12P40495 371 aaKnown RBP7.31□□□□□ -1.24
UFD1YGR048W TES1P41903 349 aaKnown RBP7.31□□□□□ -1.24
UFD1YGR048W PRY1P47032 299 aa7.31□□□□□ -1.24
UFD1YGR048W PET130P47065 347 aa7.31□□□□□ -1.24
UFD1YGR048W BNS1P50084 137 aa7.31□□□□□ -1.24
UFD1YGR048W RPL34AP87262 121 aaPredicted RBP7.31□□□□□ -1.24
UFD1YGR048W TMA23Q03525 211 aa7.31□□□□□ -1.24
UFD1YGR048W UPS3Q04006 179 aa7.31□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 73.6 ms