RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W HEM15P16622 393 aa4.7□□□□□ -1.66
PDE1YGL248W SPO12P17123 173 aa4.7□□□□□ -1.66
PDE1YGL248W PHO80P20052 293 aa4.7□□□□□ -1.66
PDE1YGL248W SPO11P23179 398 aa4.7□□□□□ -1.66
PDE1YGL248W MCR1P36060 302 aaKnown RBP4.7□□□□□ -1.66
PDE1YGL248W MRPL3P36516 390 aa4.7□□□□□ -1.66
PDE1YGL248W MRPL24P36525 258 aaPredicted RBP4.7□□□□□ -1.66
PDE1YGL248W TRM7P38238 310 aaKnown RBP4.7□□□□□ -1.66
PDE1YGL248W MDM31P38880 579 aa4.7□□□□□ -1.66
PDE1YGL248W LYS1P38998 373 aaRIP-Chip data4.7□□□□□ -1.66not detected
PDE1YGL248W LSM4P40070 187 aaKnown RBP4.7□□□□□ -1.66
PDE1YGL248W PCP1P53259 346 aa4.7□□□□□ -1.66
PDE1YGL248W BUD32P53323 261 aa4.7□□□□□ -1.66
PDE1YGL248W ERG5P54781 538 aa4.7□□□□□ -1.66
PDE1YGL248W MMT2Q08970 484 aa4.7□□□□□ -1.66
PDE1YGL248W YPL257WQ08974 193 aa4.7□□□□□ -1.66
PDE1YGL248W TAF10Q12030 206 aa4.7□□□□□ -1.66
PDE1YGL248W YLR046CQ12253 270 aa4.7□□□□□ -1.66
PDE1YGL248W YLR126CQ12288 251 aa4.7□□□□□ -1.66
PDE1YGL248W NUP157P40064 1391 aaKnown RBP4.69□□□□□ -1.66
PDE1YGL248W RPL25P04456 142 aaKnown RBP4.69□□□□□ -1.66
PDE1YGL248W CLB2P24869 491 aa4.69□□□□□ -1.66
PDE1YGL248W MRPL9P31334 269 aa4.69□□□□□ -1.66
PDE1YGL248W YKL097CP34245 136 aa4.69□□□□□ -1.66
PDE1YGL248W MTC4P38335 694 aaKnown RBP4.69□□□□□ -1.66
PDE1YGL248W YHR127WP38833 243 aaKnown RBP4.69□□□□□ -1.66
PDE1YGL248W VMA7P39111 118 aa4.69□□□□□ -1.66
PDE1YGL248W GLE2P40066 365 aa4.69□□□□□ -1.66
PDE1YGL248W FAU1P40099 211 aa4.69□□□□□ -1.66
PDE1YGL248W PSA1P41940 361 aaKnown RBP4.69□□□□□ -1.66
PDE1YGL248W MCM22P47167 239 aa4.69□□□□□ -1.66
PDE1YGL248W ASN1P49089 572 aaKnown RBP4.69□□□□□ -1.66
PDE1YGL248W YGR151CP53287 111 aa4.69□□□□□ -1.66
PDE1YGL248W COS1P53822 381 aa4.69□□□□□ -1.66
PDE1YGL248W TRS23Q03784 219 aa4.69□□□□□ -1.66
PDE1YGL248W SUE1Q06524 206 aa4.69□□□□□ -1.66
PDE1YGL248W YDL009CQ12210 107 aa4.69□□□□□ -1.66
PDE1YGL248W ORT1Q12375 292 aa4.69□□□□□ -1.66
PDE1YGL248W YPL119C-AQ3E751 87 aa4.69□□□□□ -1.66
PDE1YGL248W RIB3Q99258 208 aa4.69□□□□□ -1.66
PDE1YGL248W DET1Q99288 334 aaKnown RBP4.69□□□□□ -1.66
PDE1YGL248W IGO2Q9P305 131 aa4.69□□□□□ -1.66
PDE1YGL248W GCN3P14741 305 aa4.68□□□□□ -1.66
PDE1YGL248W STE4P18851 423 aa4.68□□□□□ -1.66
PDE1YGL248W MRPS28P21771 286 aa4.68□□□□□ -1.66
PDE1YGL248W RPS1BP23248 255 aaKnown RBP4.68□□□□□ -1.66
PDE1YGL248W PRE7P23724 241 aaKnown RBP4.68□□□□□ -1.66
PDE1YGL248W SCO1P23833 295 aa4.68□□□□□ -1.66
PDE1YGL248W ARO7P32178 256 aa4.68□□□□□ -1.66
PDE1YGL248W SPT4P32914 102 aaPredicted RBP4.68□□□□□ -1.66
PDE1YGL248W YBR096WP38256 230 aa4.68□□□□□ -1.66
PDE1YGL248W LAG1P38703 411 aa4.68□□□□□ -1.66
PDE1YGL248W YPT35P38815 214 aaKnown RBP4.68□□□□□ -1.66
PDE1YGL248W RFC2P40348 353 aa4.68□□□□□ -1.66
PDE1YGL248W PGD1P40356 397 aa4.68□□□□□ -1.66
PDE1YGL248W FAR7P43592 221 aa4.68□□□□□ -1.66
PDE1YGL248W PMT4P46971 762 aa4.68□□□□□ -1.66
PDE1YGL248W MUP1P50276 574 aa4.68□□□□□ -1.66
PDE1YGL248W YGL039WP53183 348 aaKnown RBP4.68□□□□□ -1.66
PDE1YGL248W NMA2P53204 395 aa4.68□□□□□ -1.66
PDE1YGL248W YGR017WP53210 297 aa4.68□□□□□ -1.66
PDE1YGL248W BOR1P53838 576 aa4.68□□□□□ -1.66
PDE1YGL248W RNY1Q02933 434 aaKnown RBP4.68□□□□□ -1.66
PDE1YGL248W YDR249CQ03787 373 aa4.68□□□□□ -1.66
PDE1YGL248W UTP15Q04305 513 aaKnown RBP4.68□□□□□ -1.66
PDE1YGL248W SEI1Q06058 285 aa4.68□□□□□ -1.66
PDE1YGL248W NKP2Q06162 153 aa4.68□□□□□ -1.66
PDE1YGL248W YLR012CQ07927 99 aa4.68□□□□□ -1.66
PDE1YGL248W ZEO1Q08245 113 aa4.68□□□□□ -1.66
PDE1YGL248W LAS17Q12446 633 aa4.68□□□□□ -1.66
PDE1YGL248W MRX4Q12467 430 aa4.68□□□□□ -1.66
PDE1YGL248W MHT1Q12525 324 aa4.68□□□□□ -1.66
PDE1YGL248W CYC3P06182 269 aa4.67□□□□□ -1.66
PDE1YGL248W MET2P08465 486 aa4.67□□□□□ -1.66
PDE1YGL248W BAR1P12630 587 aa4.67□□□□□ -1.66
PDE1YGL248W YBR285WP38354 144 aa4.67□□□□□ -1.66
PDE1YGL248W YHK8P38776 514 aa4.67□□□□□ -1.66
PDE1YGL248W GEP4P38812 185 aa4.67□□□□□ -1.66
PDE1YGL248W ECM14P38836 430 aa4.67□□□□□ -1.66
PDE1YGL248W MST28P39552 234 aa4.67□□□□□ -1.66
PDE1YGL248W MEP2P41948 499 aa4.67□□□□□ -1.66
PDE1YGL248W UBC13P52490 153 aa4.67□□□□□ -1.66
PDE1YGL248W TIM8P57744 87 aa4.67□□□□□ -1.66
PDE1YGL248W APS2Q00381 147 aa4.67□□□□□ -1.66
PDE1YGL248W MRX11Q03079 207 aa4.67□□□□□ -1.66
PDE1YGL248W BET5Q03630 159 aa4.67□□□□□ -1.66
PDE1YGL248W YET2Q04210 160 aa4.67□□□□□ -1.66
PDE1YGL248W YMR253CQ04835 414 aa4.67□□□□□ -1.66
PDE1YGL248W SRL2Q12020 392 aa4.67□□□□□ -1.66
PDE1YGL248W AHA1Q12449 350 aaKnown RBP4.67□□□□□ -1.66
PDE1YGL248W STH1P32597 1359 aa4.66□□□□□ -1.66
PDE1YGL248W MRS1P07266 363 aa4.66□□□□□ -1.66
PDE1YGL248W SEC14P24280 304 aaKnown RBP4.66□□□□□ -1.66
PDE1YGL248W LSB5P25369 354 aa4.66□□□□□ -1.66
PDE1YGL248W OAC1P32332 324 aa4.66□□□□□ -1.66
PDE1YGL248W UGX2P32772 223 aa4.66□□□□□ -1.66
PDE1YGL248W ALK2P32789 676 aaPredicted RBP4.66□□□□□ -1.66
PDE1YGL248W PDC2P32896 925 aa4.66□□□□□ -1.66
PDE1YGL248W HIS7P33734 552 aaKnown RBP4.66□□□□□ -1.66
PDE1YGL248W SLM6P38343 150 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms