RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W RPL23AP0CX41 137 aaKnown RBP1.81□□□□□ -2.12
NIC96YFR002W RPL23BP0CX42 137 aaKnown RBP1.81□□□□□ -2.12
NIC96YFR002W YPK2P18961 677 aa1.81□□□□□ -2.12
NIC96YFR002W POF1P25576 258 aa1.81□□□□□ -2.12
NIC96YFR002W RPL16AP26784 199 aaKnown RBP1.81□□□□□ -2.12
NIC96YFR002W TVP23P38962 199 aa1.81□□□□□ -2.12
NIC96YFR002W RPS14BP39516 138 aaKnown RBP1.81□□□□□ -2.12
NIC96YFR002W YNL320WP42840 284 aa1.81□□□□□ -2.12
NIC96YFR002W TAD2P47058 250 aa1.81□□□□□ -2.12
NIC96YFR002W HOC1P47124 396 aa1.81□□□□□ -2.12
NIC96YFR002W UBC13P52490 153 aa1.81□□□□□ -2.12
NIC96YFR002W VHT1P53241 593 aa1.81□□□□□ -2.12
NIC96YFR002W CPD1P53314 239 aa1.81□□□□□ -2.12
NIC96YFR002W SEC13Q04491 297 aaKnown RBP1.81□□□□□ -2.12
NIC96YFR002W TAZ1Q06510 381 aa1.81□□□□□ -2.12
NIC96YFR002W YDL114WQ07530 308 aa1.81□□□□□ -2.12
NIC96YFR002W FCY22Q12119 530 aa1.81□□□□□ -2.12
NIC96YFR002W PCL9Q12477 304 aa1.81□□□□□ -2.12
NIC96YFR002W LAA1P39526 2014 aa1.81□□□□□ -2.12
NIC96YFR002W THP2O13539 261 aaKnown RBP1.81□□□□□ -2.12
NIC96YFR002W ILV1P00927 576 aaKnown RBP1.81□□□□□ -2.12
NIC96YFR002W NHP6BP11633 99 aaKnown RBP1.81□□□□□ -2.12
NIC96YFR002W COQ1P18900 473 aa1.81□□□□□ -2.12
NIC96YFR002W RPL16BP26785 198 aaKnown RBP1.81□□□□□ -2.12
NIC96YFR002W RAD5P32849 1169 aaPredicted RBP1.81□□□□□ -2.12
NIC96YFR002W MAL32P38158 584 aa1.81□□□□□ -2.12
NIC96YFR002W ATG12P38316 186 aa1.81□□□□□ -2.12
NIC96YFR002W PRS2P38620 318 aaKnown RBP1.81□□□□□ -2.12
NIC96YFR002W SOP4P39543 234 aaPredicted RBP1.81□□□□□ -2.12
NIC96YFR002W SMB1P40018 196 aaKnown RBP1.81□□□□□ -2.12
NIC96YFR002W IGD1P43598 195 aa1.81□□□□□ -2.12
NIC96YFR002W RPC17P47076 161 aa1.81□□□□□ -2.12
NIC96YFR002W JHD2P47156 728 aaPredicted RBP1.81□□□□□ -2.12
NIC96YFR002W FLC3P53121 802 aa1.81□□□□□ -2.12
NIC96YFR002W MAL12P53341 584 aa1.81□□□□□ -2.12
NIC96YFR002W MRPL50P53724 139 aa1.81□□□□□ -2.12
NIC96YFR002W CUS2P53830 285 aaPredicted RBP1.81□□□□□ -2.12
NIC96YFR002W HCH1P53834 153 aa1.81□□□□□ -2.12
NIC96YFR002W KRE28Q04431 385 aa1.81□□□□□ -2.12
NIC96YFR002W YHC1Q05900 231 aaKnown RBP1.81□□□□□ -2.12
NIC96YFR002W YDL109CQ12103 647 aa1.81□□□□□ -2.12
NIC96YFR002W GET4Q12125 312 aa1.81□□□□□ -2.12
NIC96YFR002W MCT1Q12283 360 aa1.81□□□□□ -2.12
NIC96YFR002W IZH4Q99393 312 aa1.81□□□□□ -2.12
NIC96YFR002W HEM4P06174 275 aa1.8□□□□□ -2.12
NIC96YFR002W TFS1P14306 219 aa1.8□□□□□ -2.12
NIC96YFR002W PDC2P32896 925 aa1.8□□□□□ -2.12
NIC96YFR002W PRP18P33411 251 aaPredicted RBP1.8□□□□□ -2.12
NIC96YFR002W ECM8P38246 354 aa1.8□□□□□ -2.12
NIC96YFR002W MIC12P38341 106 aa1.8□□□□□ -2.12
NIC96YFR002W URA8P38627 578 aaPredicted RBP1.8□□□□□ -2.12
NIC96YFR002W PET8P38921 284 aa1.8□□□□□ -2.12
NIC96YFR002W CCH1P50077 2039 aa1.8□□□□□ -2.12
NIC96YFR002W SCS7Q03529 384 aa1.8□□□□□ -2.12
NIC96YFR002W BNA7Q04066 261 aa1.8□□□□□ -2.12
NIC96YFR002W UTP23Q12339 254 aaKnown RBP1.8□□□□□ -2.12
NIC96YFR002W YDL199CQ12407 687 aa1.8□□□□□ -2.12
NIC96YFR002W MRP1P10662 321 aaKnown RBP1.8□□□□□ -2.12
NIC96YFR002W MIR1P23641 311 aaKnown RBP1.8□□□□□ -2.12
NIC96YFR002W VMA6P32366 345 aaKnown RBP1.8□□□□□ -2.12
NIC96YFR002W SPT4P32914 102 aaPredicted RBP1.8□□□□□ -2.12
NIC96YFR002W TAF14P35189 244 aa1.8□□□□□ -2.12
NIC96YFR002W CBT1P36038 271 aaPredicted RBP1.8□□□□□ -2.12
NIC96YFR002W DBP7P36120 742 aaKnown RBP1.8□□□□□ -2.12
NIC96YFR002W HMT1P38074 348 aa1.8□□□□□ -2.12
NIC96YFR002W YBR241CP38142 488 aa1.8□□□□□ -2.12
NIC96YFR002W BMT2P38278 337 aa1.8□□□□□ -2.12
NIC96YFR002W TDA11P38854 504 aa1.8□□□□□ -2.12
NIC96YFR002W ERG28P40030 148 aa1.8□□□□□ -2.12
NIC96YFR002W YRB2P40517 327 aa1.8□□□□□ -2.12
NIC96YFR002W CSM4Q08955 156 aa1.8□□□□□ -2.12
NIC96YFR002W PRM4Q12498 284 aa1.8□□□□□ -2.12
NIC96YFR002W FOL3Q12676 427 aaPredicted RBP1.8□□□□□ -2.12
NIC96YFR002W SEY1Q99287 776 aa1.8□□□□□ -2.12
NIC96YFR002W RPL24BP24000 155 aaKnown RBP1.79□□□□□ -2.12
NIC96YFR002W EHD3P28817 500 aa1.79□□□□□ -2.12
NIC96YFR002W CAB3P36076 571 aa1.79□□□□□ -2.12
NIC96YFR002W RCK1P38622 512 aa1.79□□□□□ -2.12
NIC96YFR002W HSH155P49955 971 aaKnown RBP1.79□□□□□ -2.12
NIC96YFR002W CWC23P52868 283 aaPredicted RBP1.79□□□□□ -2.12
NIC96YFR002W VEL1P53058 206 aa1.79□□□□□ -2.12
NIC96YFR002W TPN1P53099 579 aa1.79□□□□□ -2.12
NIC96YFR002W HOP2P53187 214 aa1.79□□□□□ -2.12
NIC96YFR002W SWC4P53201 476 aa1.79□□□□□ -2.12
NIC96YFR002W TPC1P53257 314 aa1.79□□□□□ -2.12
NIC96YFR002W MAL13P53338 473 aa1.79□□□□□ -2.12
NIC96YFR002W REX2P54964 269 aaKnown RBP1.79□□□□□ -2.12
NIC96YFR002W FAR10Q06001 478 aa1.79□□□□□ -2.12
NIC96YFR002W LOA1Q06508 300 aa1.79□□□□□ -2.12
NIC96YFR002W RAX2Q12465 1220 aa1.79□□□□□ -2.12
NIC96YFR002W YPR064WQ12492 139 aa1.79□□□□□ -2.12
NIC96YFR002W YKL183C-AQ3E765 70 aa1.79□□□□□ -2.12
NIC96YFR002W ACC1Q00955 2233 aaKnown RBP1.79□□□□□ -2.12
NIC96YFR002W IPP1P00817 287 aaKnown RBP1.79□□□□□ -2.12
NIC96YFR002W RPS18AP0CX55 146 aaKnown RBP1.79□□□□□ -2.12
NIC96YFR002W RPS18BP0CX56 146 aaPredicted RBP1.79□□□□□ -2.12
NIC96YFR002W DEP1P31385 405 aa1.79□□□□□ -2.12
NIC96YFR002W VPS21P36017 210 aaKnown RBP1.79□□□□□ -2.12
NIC96YFR002W YBR062CP38239 180 aa1.79□□□□□ -2.12
NIC96YFR002W CHL4P38907 458 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms