RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W BRR6P53062 197 aa1.82□□□□□ -2.12
SIR4YDR227W NIF3P53081 288 aa1.82□□□□□ -2.12
SIR4YDR227W LST7P53237 242 aa1.82□□□□□ -2.12
SIR4YDR227W TIM13P53299 105 aa1.82□□□□□ -2.12
SIR4YDR227W YMR178WQ03219 274 aaKnown RBP1.82□□□□□ -2.12
SIR4YDR227W MUM3Q08750 479 aa1.82□□□□□ -2.12
SIR4YDR227W VPS68Q12016 184 aa1.82□□□□□ -2.12
SIR4YDR227W YPR022CQ12139 1133 aa1.82□□□□□ -2.12
SIR4YDR227W YAR066WP0CX18 203 aa1.82□□□□□ -2.12
SIR4YDR227W YHR214WP0CX19 203 aa1.82□□□□□ -2.12
SIR4YDR227W MUD1P32605 298 aaKnown RBP1.82□□□□□ -2.12
SIR4YDR227W YBR241CP38142 488 aa1.82□□□□□ -2.12
SIR4YDR227W YBR053CP38235 358 aa1.82□□□□□ -2.12
SIR4YDR227W TRM7P38238 310 aaKnown RBP1.82□□□□□ -2.12
SIR4YDR227W RMD6P39975 231 aa1.82□□□□□ -2.12
SIR4YDR227W RIM8P53179 542 aa1.82□□□□□ -2.12
SIR4YDR227W ASI1P54074 624 aa1.82□□□□□ -2.12
SIR4YDR227W YMD8Q03697 442 aa1.82□□□□□ -2.12
SIR4YDR227W YTH1Q06102 208 aaPredicted RBP1.82□□□□□ -2.12
SIR4YDR227W SUE1Q06524 206 aa1.82□□□□□ -2.12
SIR4YDR227W AIM6Q07716 390 aa1.82□□□□□ -2.12
SIR4YDR227W GPN2Q08726 347 aaPredicted RBP1.82□□□□□ -2.12
SIR4YDR227W RNA15P25299 296 aaPredicted RBP1.81□□□□□ -2.12
SIR4YDR227W FUN19P28003 413 aaPredicted RBP1.81□□□□□ -2.12
SIR4YDR227W YMC1P32331 307 aa1.81□□□□□ -2.12
SIR4YDR227W JEN1P36035 616 aa1.81□□□□□ -2.12
SIR4YDR227W POP4P38336 279 aa1.81□□□□□ -2.12
SIR4YDR227W SPO73P40031 143 aa1.81□□□□□ -2.12
SIR4YDR227W UBP8P50102 471 aa1.81□□□□□ -2.12
SIR4YDR227W MRPS35P53292 345 aa1.81□□□□□ -2.12
SIR4YDR227W SPC24Q04477 213 aa1.81□□□□□ -2.12
SIR4YDR227W SPO77Q06134 477 aa1.81□□□□□ -2.12
SIR4YDR227W MHR1Q06630 226 aa1.81□□□□□ -2.12
SIR4YDR227W YOL073CQ08232 322 aa1.81□□□□□ -2.12
SIR4YDR227W YLR108CQ12259 485 aa1.81□□□□□ -2.12
SIR4YDR227W NCA2Q12374 616 aa1.81□□□□□ -2.12
SIR4YDR227W YHK8P38776 514 aa1.81□□□□□ -2.12
SIR4YDR227W MGR3Q04472 501 aa1.81□□□□□ -2.12
SIR4YDR227W DYN3Q04949 312 aa1.81□□□□□ -2.12
SIR4YDR227W THI21Q08975 551 aa1.81□□□□□ -2.12
SIR4YDR227W FCY1Q12178 158 aa1.81□□□□□ -2.12
SIR4YDR227W RHO2P06781 192 aa1.81□□□□□ -2.12
SIR4YDR227W GRX2P17695 143 aaKnown RBP1.81□□□□□ -2.12
SIR4YDR227W ARO2P28777 376 aaKnown RBP1.81□□□□□ -2.12
SIR4YDR227W EHD3P28817 500 aa1.81□□□□□ -2.12
SIR4YDR227W SPT4P32914 102 aaPredicted RBP1.81□□□□□ -2.12
SIR4YDR227W URA8P38627 578 aaPredicted RBP1.81□□□□□ -2.12
SIR4YDR227W LYS1P38998 373 aaRIP-Chip data1.81□□□□□ -2.12not detected
SIR4YDR227W GET2P40056 285 aa1.81□□□□□ -2.12
SIR4YDR227W PAC11P40960 533 aa1.81□□□□□ -2.12
SIR4YDR227W FAR3P46671 204 aa1.81□□□□□ -2.12
SIR4YDR227W TEX1P53851 422 aaKnown RBP1.81□□□□□ -2.12
SIR4YDR227W RSC9Q03124 581 aa1.81□□□□□ -2.12
SIR4YDR227W DML1Q03652 475 aa1.81□□□□□ -2.12
SIR4YDR227W UTP23Q12339 254 aaKnown RBP1.81□□□□□ -2.12
SIR4YDR227W YMR316C-AI2HB70 103 aa1.81□□□□□ -2.12
SIR4YDR227W MXR2P25566 168 aa1.81□□□□□ -2.12
SIR4YDR227W CTS1P29029 562 aa1.81□□□□□ -2.12
SIR4YDR227W HOM6P31116 359 aaKnown RBP1.81□□□□□ -2.12
SIR4YDR227W YOR062CP36025 268 aa1.81□□□□□ -2.12
SIR4YDR227W YKL075CP36083 450 aa1.81□□□□□ -2.12
SIR4YDR227W APL3P38065 1025 aa1.81□□□□□ -2.12
SIR4YDR227W YMC2P38087 329 aa1.81□□□□□ -2.12
SIR4YDR227W CTP1P38152 299 aa1.81□□□□□ -2.12
SIR4YDR227W RPL10P41805 221 aaKnown RBP1.81□□□□□ -2.12
SIR4YDR227W NCA3P46955 337 aa1.81□□□□□ -2.12
SIR4YDR227W SWC4P53201 476 aa1.81□□□□□ -2.12
SIR4YDR227W CAF40P53829 373 aa1.81□□□□□ -2.12
SIR4YDR227W AIM36Q03798 255 aa1.81□□□□□ -2.12
SIR4YDR227W TY1A-DR2Q03964 440 aaKnown RBP1.81□□□□□ -2.12
SIR4YDR227W CYK3Q07533 885 aa1.81□□□□□ -2.12
SIR4YDR227W YOL160WQ08321 113 aa1.81□□□□□ -2.12
SIR4YDR227W RMD5Q12508 421 aa1.81□□□□□ -2.12
SIR4YDR227W BOL1Q3E793 110 aa1.81□□□□□ -2.12
SIR4YDR227W YLR361C-AQ3E795 98 aa1.81□□□□□ -2.12
SIR4YDR227W Q0144Q9ZZW2 109 aa1.81□□□□□ -2.12
SIR4YDR227W MRS3P10566 314 aa1.8□□□□□ -2.12
SIR4YDR227W MTR2P34232 184 aaKnown RBP1.8□□□□□ -2.12
SIR4YDR227W YBR259WP38338 688 aa1.8□□□□□ -2.12
SIR4YDR227W PEX22P39718 180 aa1.8□□□□□ -2.12
SIR4YDR227W COS4P43542 379 aa1.8□□□□□ -2.12
SIR4YDR227W LOH1P47055 219 aa1.8□□□□□ -2.12
SIR4YDR227W BIO3P50277 480 aa1.8□□□□□ -2.12
SIR4YDR227W TPC1P53257 314 aa1.8□□□□□ -2.12
SIR4YDR227W GPI1P53306 609 aa1.8□□□□□ -2.12
SIR4YDR227W MSO1P53604 210 aaKnown RBP1.8□□□□□ -2.12
SIR4YDR227W GAS3Q03655 524 aa1.8□□□□□ -2.12
SIR4YDR227W DXO1Q06349 442 aa1.8□□□□□ -2.12
SIR4YDR227W RRP40Q08285 240 aaKnown RBP1.8□□□□□ -2.12
SIR4YDR227W TAD3Q9URQ3 322 aa1.8□□□□□ -2.12
SIR4YDR227W ALG7P07286 448 aa1.8□□□□□ -2.12
SIR4YDR227W IDP1P21954 428 aaKnown RBP1.8□□□□□ -2.12
SIR4YDR227W POF1P25576 258 aa1.8□□□□□ -2.12
SIR4YDR227W DCG1P32460 244 aa1.8□□□□□ -2.12
SIR4YDR227W SDS24P38314 527 aa1.8□□□□□ -2.12
SIR4YDR227W PEX7P39108 375 aa1.8□□□□□ -2.12
SIR4YDR227W COG3P40094 801 aa1.8□□□□□ -2.12
SIR4YDR227W BMT5P40493 336 aa1.8□□□□□ -2.12
SIR4YDR227W YFL015CP43578 164 aa1.8□□□□□ -2.12
SIR4YDR227W YFR035CP43608 114 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 217.6 ms