RNA–Protein interactions for RNA: YDR190C

RVB1, Transcript of ATP-dependent DNA helicase, also known as pontin, yeast

Gene RVB1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVB1	YDR190C	YGR067C	P53243	804 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	YGR266W	P53326	701 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	OGG1	P53397	376 aa	Predicted RBP	4.26	□□□□□ -1.73
RVB1	YDR190C	SWS2	P53937	143 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	EGD1	Q02642	157 aa	Known RBP	4.26	□□□□□ -1.73
RVB1	YDR190C	SMA2	Q04658	369 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	DCR2	Q05924	578 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	YPR127W	Q06494	345 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	YPR174C	Q06616	221 aa	Predicted RBP	4.26	□□□□□ -1.73
RVB1	YDR190C	LAS17	Q12446	633 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	YOS9	Q99220	542 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	CYR1	P08678	2026 aa	Known RBP	4.25	□□□□□ -1.73
RVB1	YDR190C	COX9	P07255	59 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	MET3	P08536	511 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	CDC23	P16522	626 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	HNM1	P19807	563 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	MAG1	P22134	296 aa	Known RBP	4.25	□□□□□ -1.73
RVB1	YDR190C	DCG1	P32460	244 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	WBP1	P33767	430 aa	Known RBP	4.25	□□□□□ -1.73
RVB1	YDR190C	SRX1	P36077	127 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	NAT2	P37293	288 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	CHK1	P38147	527 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	VBA2	P38358	474 aa	Known RBP	4.25	□□□□□ -1.73
RVB1	YDR190C	PTI1	P39927	425 aa	Predicted RBP	4.25	□□□□□ -1.73
RVB1	YDR190C	YER184C	P39961	794 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	YFR054C	P43622	192 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	ALB1	P47019	175 aa	Predicted RBP	4.25	□□□□□ -1.73
RVB1	YDR190C	MPA43	P53583	542 aa	Predicted RBP	4.25	□□□□□ -1.73
RVB1	YDR190C	UTP15	Q04305	513 aa	Known RBP	4.25	□□□□□ -1.73
RVB1	YDR190C	TMA10	Q06177	86 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	YLR031W	Q07978	186 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	FEX1	Q08913	375 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	BTS1	Q12051	335 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	ATP14	Q12349	124 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	PSF1	Q12488	208 aa		4.25	□□□□□ -1.73
RVB1	YDR190C	BEM2	P39960	2167 aa	Known RBP	4.25	□□□□□ -1.73
RVB1	YDR190C	YLR358C	O13565	187 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	YBR085C-A	O43137	85 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	ARG80	P07249	177 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	SGA1	P08019	549 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	PDX1	P16451	410 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	RPB8	P20436	146 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	MSS1	P32559	526 aa	Predicted RBP	4.24	□□□□□ -1.73
RVB1	YDR190C	RPS27A	P35997	82 aa	Known RBP	4.24	□□□□□ -1.73
RVB1	YDR190C	SDS24	P38314	527 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	RPS27B	P38711	82 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
RVB1	YDR190C	PUG1	P40100	303 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	PIG2	P40187	538 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	HXT9	P40885	567 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	TAD2	P47058	250 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	YDL183C	P48569	320 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	BRR6	P53062	197 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	YGL204C	P53089	101 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	YIP4	P53093	235 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	POP6	P53218	158 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	SUN4	P53616	420 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	NCE101	Q02820	53 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	PRM15	Q03262	622 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	SCS7	Q03529	384 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	PEX30	Q06169	523 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	HEM25	Q07534	307 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	DAP1	Q12091	152 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	YDL109C	Q12103	647 aa		4.24	□□□□□ -1.73
RVB1	YDR190C	RTC5	Q12108	567 aa	Known RBP	4.24	□□□□□ -1.73
RVB1	YDR190C	YMR084W	A2P2R3	262 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	QCR7	P00128	127 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	RPL3	P14126	387 aa	Known RBP	4.23	□□□□□ -1.73
RVB1	YDR190C	STE18	P18852	110 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	FEN2	P25621	512 aa	Known RBP	4.23	□□□□□ -1.73
RVB1	YDR190C	YCR061W	P25639	631 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	MRP20	P32387	263 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	YKL071W	P36086	256 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	MRPL36	P36531	177 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	MTC4	P38335	694 aa	Known RBP	4.23	□□□□□ -1.73
RVB1	YDR190C	FMO1	P38866	432 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	YIL152W	P40455	235 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	YIL077C	P40508	320 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	CFD1	P40558	293 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	YPS6	P40583	537 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	OTU1	P43558	301 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	UBX6	P47049	396 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	RSM27	P53305	110 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	CWC25	P53854	179 aa	Known RBP	4.23	□□□□□ -1.73
RVB1	YDR190C	INN1	P53901	409 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	KAP120	Q02932	1032 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	PEX25	Q02969	394 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	RSM28	Q03430	361 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	STP3	Q05937	343 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	YEH1	Q07804	573 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	SYC1	Q08553	188 aa	Predicted RBP	4.23	□□□□□ -1.73
RVB1	YDR190C	REX3	Q12090	404 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	ODC2	Q99297	307 aa		4.23	□□□□□ -1.73
RVB1	YDR190C	OPI3	P05375	206 aa		4.22	□□□□□ -1.73
RVB1	YDR190C	RPL1A	P0CX43	217 aa	Known RBP	4.22	□□□□□ -1.73
RVB1	YDR190C	RPL1B	P0CX44	217 aa	Known RBP	4.22	□□□□□ -1.73
RVB1	YDR190C	ARF1	P11076	181 aa	Known RBP	4.22	□□□□□ -1.73
RVB1	YDR190C	MRP17	P28778	131 aa		4.22	□□□□□ -1.73
RVB1	YDR190C	RPC34	P32910	317 aa		4.22	□□□□□ -1.73
RVB1	YDR190C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms