RNA–Protein interactions for RNA: YDR087C

RRP1, Transcript of Essential evolutionarily conserved nucleolar protein, yeastyeast

Gene RRP1, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP1YDR087C HSH155P49955 971 aaKnown RBP3.72□□□□□ -1.81
RRP1YDR087C NBP35P52920 328 aa3.72□□□□□ -1.81
RRP1YDR087C YNL095CP53932 642 aa3.72□□□□□ -1.81
RRP1YDR087C YOS9Q99220 542 aa3.72□□□□□ -1.81
RRP1YDR087C SSK22P25390 1331 aaPredicted RBP3.71□□□□□ -1.81
RRP1YDR087C USO1P25386 1790 aa3.71□□□□□ -1.81
RRP1YDR087C TY1B-JR2P47100 1755 aaKnown RBP3.71□□□□□ -1.81
RRP1YDR087C TY1B-ER2Q03619 1755 aa3.71□□□□□ -1.81
RRP1YDR087C TY1B-MR1Q04214 1755 aa3.71□□□□□ -1.81
RRP1YDR087C TY1B-MR2Q04670 1755 aaKnown RBP3.71□□□□□ -1.81
RRP1YDR087C TY1B-LR1Q12088 1755 aaKnown RBP3.71□□□□□ -1.81
RRP1YDR087C TY1B-NL1Q12112 1755 aa3.71□□□□□ -1.81
RRP1YDR087C TY1B-GR1Q12141 1755 aa3.71□□□□□ -1.81
RRP1YDR087C TY1B-BLQ12490 1755 aa3.71□□□□□ -1.81
RRP1YDR087C TDH2P00358 332 aaKnown RBP3.71□□□□□ -1.82
RRP1YDR087C COS2P0CX12 379 aa3.71□□□□□ -1.82
RRP1YDR087C COS3P0CX13 379 aa3.71□□□□□ -1.82
RRP1YDR087C POL30P15873 258 aaKnown RBP3.71□□□□□ -1.82
RRP1YDR087C PEX3P28795 441 aa3.71□□□□□ -1.82
RRP1YDR087C PRM9P39551 298 aa3.71□□□□□ -1.82
RRP1YDR087C YAR1P46683 200 aa3.71□□□□□ -1.82
RRP1YDR087C YJL144WP47009 104 aa3.71□□□□□ -1.82
RRP1YDR087C OST3P48439 350 aa3.71□□□□□ -1.82
RRP1YDR087C COX20Q04935 205 aa3.71□□□□□ -1.82
RRP1YDR087C AI5_BETAQ9ZZX0 354 aa3.71□□□□□ -1.82
RRP1YDR087C RPO21P04050 1733 aaKnown RBP3.7□□□□□ -1.82
RRP1YDR087C ERG2P32352 222 aa3.7□□□□□ -1.82
RRP1YDR087C RPT5P33297 434 aaKnown RBP3.7□□□□□ -1.82
RRP1YDR087C HMT1P38074 348 aa3.7□□□□□ -1.82
RRP1YDR087C PHO89P38361 574 aa3.7□□□□□ -1.82
RRP1YDR087C YER084WP40057 128 aa3.7□□□□□ -1.82
RRP1YDR087C YJL118WP47022 219 aa3.7□□□□□ -1.82
RRP1YDR087C YPL039WQ03080 316 aa3.7□□□□□ -1.82
RRP1YDR087C HRT1Q08273 121 aa3.7□□□□□ -1.82
RRP1YDR087C YBL112CQ3E7Y4 105 aa3.7□□□□□ -1.82
RRP1YDR087C PDR10P51533 1564 aa3.69□□□□□ -1.82
RRP1YDR087C YMR316C-AI2HB70 103 aa3.69□□□□□ -1.82
RRP1YDR087C RPL24AP04449 155 aaKnown RBP3.69□□□□□ -1.82
RRP1YDR087C ZWF1P11412 505 aaKnown RBP3.69□□□□□ -1.82
RRP1YDR087C VPS1P21576 704 aaKnown RBP3.69□□□□□ -1.82
RRP1YDR087C ALK2P32789 676 aaPredicted RBP3.69□□□□□ -1.82
RRP1YDR087C SUR2P38992 349 aa3.69□□□□□ -1.82
RRP1YDR087C BUD13P46947 266 aaPredicted RBP3.69□□□□□ -1.82
RRP1YDR087C PER33Q12144 273 aa3.69□□□□□ -1.82
RRP1YDR087C MRX4Q12467 430 aa3.69□□□□□ -1.82
RRP1YDR087C ULS1Q08562 1619 aa3.69□□□□□ -1.82
RRP1YDR087C MET2P08465 486 aa3.68□□□□□ -1.82
RRP1YDR087C TAD2P47058 250 aa3.68□□□□□ -1.82
RRP1YDR087C MIG2P53035 382 aa3.68□□□□□ -1.82
RRP1YDR087C ALG9P53868 555 aaKnown RBP3.68□□□□□ -1.82
RRP1YDR087C OST6Q03723 332 aa3.68□□□□□ -1.82
RRP1YDR087C YMR166CQ03829 368 aa3.68□□□□□ -1.82
RRP1YDR087C SME1Q12330 94 aaPredicted RBP3.68□□□□□ -1.82
RRP1YDR087C KRE1P17260 313 aa3.67□□□□□ -1.82
RRP1YDR087C CAM1P29547 415 aaKnown RBP3.67□□□□□ -1.82
RRP1YDR087C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
RRP1YDR087C ARN2P38724 620 aa3.67□□□□□ -1.82
RRP1YDR087C SPL2P38839 148 aa3.67□□□□□ -1.82
RRP1YDR087C RPE1P46969 238 aa3.67□□□□□ -1.82
RRP1YDR087C RPL4AP10664 362 aaKnown RBP3.66□□□□□ -1.82
RRP1YDR087C MIG1P27705 504 aa3.66□□□□□ -1.82
RRP1YDR087C CSG2P35206 410 aa3.66□□□□□ -1.82
RRP1YDR087C YHL049CP38722 271 aa3.66□□□□□ -1.82
RRP1YDR087C DDI1P40087 428 aa3.66□□□□□ -1.82
RRP1YDR087C RPL4BP49626 362 aaKnown RBP3.66□□□□□ -1.82
RRP1YDR087C NBP1P52919 319 aaPredicted RBP3.66□□□□□ -1.82
RRP1YDR087C YGL088WP53151 121 aa3.66□□□□□ -1.82
RRP1YDR087C RSM27P53305 110 aa3.66□□□□□ -1.82
RRP1YDR087C MAL13P53338 473 aa3.66□□□□□ -1.82
RRP1YDR087C MPP6P53725 186 aaPredicted RBP3.66□□□□□ -1.82
RRP1YDR087C FCF1Q05498 189 aaPredicted RBP3.66□□□□□ -1.82
RRP1YDR087C CTR3Q06686 241 aa3.66□□□□□ -1.82
RRP1YDR087C RRT8Q08219 342 aa3.66□□□□□ -1.82
RRP1YDR087C SPP41P38904 1435 aa3.66□□□□□ -1.82
RRP1YDR087C ARO1P08566 1588 aaKnown RBP3.66□□□□□ -1.82
RRP1YDR087C TOP2P06786 1428 aaKnown RBP3.65□□□□□ -1.83
RRP1YDR087C HIS3P06633 220 aa3.65□□□□□ -1.83
RRP1YDR087C YHI9P38765 294 aa3.65□□□□□ -1.83
RRP1YDR087C SHC1P39000 512 aa3.65□□□□□ -1.83
RRP1YDR087C TIM21P53220 239 aa3.65□□□□□ -1.83
RRP1YDR087C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
RRP1YDR087C ATC1Q04005 294 aa3.65□□□□□ -1.83
RRP1YDR087C FEX1Q08913 375 aa3.65□□□□□ -1.83
RRP1YDR087C FEX2Q08991 375 aa3.65□□□□□ -1.83
RRP1YDR087C TIM22Q12328 207 aa3.65□□□□□ -1.83
RRP1YDR087C HIS1P00498 297 aaKnown RBP3.64□□□□□ -1.83
RRP1YDR087C YDR114CQ04597 100 aa3.64□□□□□ -1.83
RRP1YDR087C MSF1P08425 469 aa3.63□□□□□ -1.83
RRP1YDR087C TOM40P23644 387 aaKnown RBP3.63□□□□□ -1.83
RRP1YDR087C RRT12P25381 491 aa3.63□□□□□ -1.83
RRP1YDR087C ALG11P53954 548 aaKnown RBP3.63□□□□□ -1.83
RRP1YDR087C CTS2Q06350 511 aa3.63□□□□□ -1.83
RRP1YDR087C RLP24Q07915 199 aaKnown RBP3.63□□□□□ -1.83
RRP1YDR087C STH1P32597 1359 aa3.63□□□□□ -1.83
RRP1YDR087C TRM3Q07527 1436 aa3.62□□□□□ -1.83
RRP1YDR087C DSN1P40568 576 aa3.62□□□□□ -1.83
RRP1YDR087C YOL019WQ08157 551 aa3.62□□□□□ -1.83
RRP1YDR087C AGC1Q12482 902 aa3.62□□□□□ -1.83
RRP1YDR087C NOT5Q12514 560 aaPredicted RBP3.62□□□□□ -1.83
RRP1YDR087C RSA4P25382 515 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms