RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C PET494P07390 489 aaPredicted RBP1.18□□□□□ -2.22
UFD2YDL190C MRPL25P23369 157 aa1.18□□□□□ -2.22
UFD2YDL190C AEP1P32493 518 aa1.18□□□□□ -2.22
UFD2YDL190C RFT1P38206 574 aaPredicted RBP1.18□□□□□ -2.22
UFD2YDL190C ATG12P38316 186 aa1.18□□□□□ -2.22
UFD2YDL190C PRS2P38620 318 aaKnown RBP1.18□□□□□ -2.22
UFD2YDL190C GCN20P43535 752 aaKnown RBP1.18□□□□□ -2.22
UFD2YDL190C IBA57P47158 497 aa1.18□□□□□ -2.22
UFD2YDL190C PGU1P47180 361 aa1.18□□□□□ -2.22
UFD2YDL190C VEL1P53058 206 aa1.18□□□□□ -2.22
UFD2YDL190C CGR1P53188 120 aa1.18□□□□□ -2.22
UFD2YDL190C FMP48P53233 369 aa1.18□□□□□ -2.22
UFD2YDL190C MRPL50P53724 139 aa1.18□□□□□ -2.22
UFD2YDL190C GIM3P53900 129 aa1.18□□□□□ -2.22
UFD2YDL190C KTR6P54070 446 aa1.18□□□□□ -2.22
UFD2YDL190C TRM44Q02648 567 aaKnown RBP1.18□□□□□ -2.22
UFD2YDL190C SEC13Q04491 297 aaKnown RBP1.18□□□□□ -2.22
UFD2YDL190C PAM18Q07914 168 aa1.18□□□□□ -2.22
UFD2YDL190C CLP1Q08685 445 aaPredicted RBP1.18□□□□□ -2.22
UFD2YDL190C YOR292CQ08743 309 aa1.18□□□□□ -2.22
UFD2YDL190C MSH5Q12175 901 aa1.18□□□□□ -2.22
UFD2YDL190C YDR018CQ12185 396 aa1.18□□□□□ -2.22
UFD2YDL190C YOR097CQ12274 175 aaPredicted RBP1.18□□□□□ -2.22
UFD2YDL190C REV1P12689 985 aa1.18□□□□□ -2.22
UFD2YDL190C EPT1P22140 391 aa1.18□□□□□ -2.22
UFD2YDL190C ZIP1P31111 875 aa1.18□□□□□ -2.22
UFD2YDL190C KRE6P32486 720 aa1.18□□□□□ -2.22
UFD2YDL190C SRB4P32569 687 aa1.18□□□□□ -2.22
UFD2YDL190C DOA4P32571 926 aa1.18□□□□□ -2.22
UFD2YDL190C SPS19P32573 292 aaKnown RBP1.18□□□□□ -2.22
UFD2YDL190C TIP20P33891 701 aa1.18□□□□□ -2.22
UFD2YDL190C BMH2P34730 273 aaKnown RBP1.18□□□□□ -2.22
UFD2YDL190C MRPL27P36526 146 aaPredicted RBP1.18□□□□□ -2.22
UFD2YDL190C SMP1P38128 452 aa1.18□□□□□ -2.22
UFD2YDL190C RPL10P41805 221 aaKnown RBP1.18□□□□□ -2.22
UFD2YDL190C YJR012CP47087 207 aa1.18□□□□□ -2.22
UFD2YDL190C YPS5P53057 165 aa1.18□□□□□ -2.22
UFD2YDL190C SDT1P53078 280 aa1.18□□□□□ -2.22
UFD2YDL190C YGL039WP53183 348 aaKnown RBP1.18□□□□□ -2.22
UFD2YDL190C MRPS16Q02608 121 aa1.18□□□□□ -2.22
UFD2YDL190C RNY1Q02933 434 aaKnown RBP1.18□□□□□ -2.22
UFD2YDL190C INP1Q03694 420 aa1.18□□□□□ -2.22
UFD2YDL190C YML018CQ03730 393 aa1.18□□□□□ -2.22
UFD2YDL190C MYO5Q04439 1219 aaKnown RBP1.18□□□□□ -2.22
UFD2YDL190C YOL029CQ08187 201 aa1.18□□□□□ -2.22
UFD2YDL190C TMC1Q08422 150 aaPredicted RBP1.18□□□□□ -2.22
UFD2YDL190C YPL278CQ08990 100 aa1.18□□□□□ -2.22
UFD2YDL190C RIF1P29539 1916 aa1.17□□□□□ -2.22
UFD2YDL190C YBR056W-AI2HB52 66 aa1.17□□□□□ -2.22
UFD2YDL190C TDH2P00358 332 aaKnown RBP1.17□□□□□ -2.22
UFD2YDL190C MATALPHA1P0CY06 175 aa1.17□□□□□ -2.22
UFD2YDL190C HMLALPHA1P0CY07 175 aa1.17□□□□□ -2.22
UFD2YDL190C DAL81P21657 970 aa1.17□□□□□ -2.22
UFD2YDL190C FRM2P37261 193 aa1.17□□□□□ -2.22
UFD2YDL190C LDB7P38210 180 aa1.17□□□□□ -2.22
UFD2YDL190C MBA1P38300 278 aa1.17□□□□□ -2.22
UFD2YDL190C RRT13P40042 185 aa1.17□□□□□ -2.22
UFD2YDL190C ASG7P46993 209 aa1.17□□□□□ -2.22
UFD2YDL190C YGL262WP53054 175 aa1.17□□□□□ -2.22
UFD2YDL190C VPS60Q03390 229 aa1.17□□□□□ -2.22
UFD2YDL190C YDR209CQ03480 137 aa1.17□□□□□ -2.22
UFD2YDL190C SEC10Q06245 871 aa1.17□□□□□ -2.22
UFD2YDL190C MHR1Q06630 226 aa1.17□□□□□ -2.22
UFD2YDL190C SME1Q12330 94 aaPredicted RBP1.17□□□□□ -2.22
UFD2YDL190C RAX2Q12465 1220 aa1.17□□□□□ -2.22
UFD2YDL190C TOR1P35169 2470 aa1.17□□□□□ -2.22
UFD2YDL190C ARG80P07249 177 aa1.17□□□□□ -2.22
UFD2YDL190C PCL1P24867 279 aa1.17□□□□□ -2.22
UFD2YDL190C RNA15P25299 296 aaPredicted RBP1.17□□□□□ -2.22
UFD2YDL190C YCR025CP25352 136 aa1.17□□□□□ -2.22
UFD2YDL190C MRX3P38172 270 aa1.17□□□□□ -2.22
UFD2YDL190C YER184CP39961 794 aa1.17□□□□□ -2.22
UFD2YDL190C RRG9P40156 214 aa1.17□□□□□ -2.22
UFD2YDL190C PRE5P40302 234 aaKnown RBP1.17□□□□□ -2.22
UFD2YDL190C AVT7P40501 490 aa1.17□□□□□ -2.22
UFD2YDL190C OTU1P43558 301 aa1.17□□□□□ -2.22
UFD2YDL190C MAL13P53338 473 aa1.17□□□□□ -2.22
UFD2YDL190C YLR152CP54072 576 aa1.17□□□□□ -2.22
UFD2YDL190C VHS1Q03785 461 aa1.17□□□□□ -2.22
UFD2YDL190C YMR244WQ04018 355 aa1.17□□□□□ -2.22
UFD2YDL190C YLR283WQ05867 314 aa1.17□□□□□ -2.22
UFD2YDL190C SSQ1Q05931 657 aaPredicted RBP1.17□□□□□ -2.22
UFD2YDL190C GIS3Q12418 502 aa1.17□□□□□ -2.22
UFD2YDL190C YOS9Q99220 542 aa1.17□□□□□ -2.22
UFD2YDL190C ATG15P25641 520 aa1.16□□□□□ -2.22
UFD2YDL190C PEX3P28795 441 aa1.16□□□□□ -2.22
UFD2YDL190C QRI5P32344 111 aa1.16□□□□□ -2.22
UFD2YDL190C ALK2P32789 676 aaPredicted RBP1.16□□□□□ -2.22
UFD2YDL190C ZRT3P34240 503 aa1.16□□□□□ -2.22
UFD2YDL190C YER034WP40022 185 aaKnown RBP1.16□□□□□ -2.22
UFD2YDL190C KRE29P40026 464 aa1.16□□□□□ -2.22
UFD2YDL190C YIL012WP40551 113 aa1.16□□□□□ -2.22
UFD2YDL190C MSS2P40990 351 aa1.16□□□□□ -2.22
UFD2YDL190C COG7P53195 279 aa1.16□□□□□ -2.22
UFD2YDL190C NOP13P53883 403 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
UFD2YDL190C PGA2P53903 129 aa1.16□□□□□ -2.22
UFD2YDL190C HAL1Q01766 294 aa1.16□□□□□ -2.22
UFD2YDL190C RSM10Q03201 203 aa1.16□□□□□ -2.22
UFD2YDL190C EBS1Q03466 884 aaKnown RBP1.16□□□□□ -2.22
UFD2YDL190C UTP15Q04305 513 aaKnown RBP1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms