RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C SFG1Q12507 346 aa5.18□□□□□ -1.58
MDH3YDL078C MHF2Q3E829 80 aa5.18□□□□□ -1.58
MDH3YDL078C MRP10O75012 95 aa5.17□□□□□ -1.58
MDH3YDL078C CDC7P06243 507 aa5.17□□□□□ -1.58
MDH3YDL078C RAD7P06779 565 aa5.17□□□□□ -1.58
MDH3YDL078C ENA1P13587 1091 aa5.17□□□□□ -1.58
MDH3YDL078C CPR4P25334 318 aa5.17□□□□□ -1.58
MDH3YDL078C DEG1P31115 442 aaKnown RBP5.17□□□□□ -1.58
MDH3YDL078C ATS1P31386 333 aa5.17□□□□□ -1.58
MDH3YDL078C HMX1P32339 317 aa5.17□□□□□ -1.58
MDH3YDL078C ECT1P33412 323 aa5.17□□□□□ -1.58
MDH3YDL078C HIS7P33734 552 aaKnown RBP5.17□□□□□ -1.58
MDH3YDL078C YBR241CP38142 488 aa5.17□□□□□ -1.58
MDH3YDL078C PGD1P40356 397 aa5.17□□□□□ -1.58
MDH3YDL078C MET28P40573 187 aa5.17□□□□□ -1.58
MDH3YDL078C SNM1P40993 198 aa5.17□□□□□ -1.58
MDH3YDL078C CPR8P53728 308 aa5.17□□□□□ -1.58
MDH3YDL078C YNL181WP53878 407 aa5.17□□□□□ -1.58
MDH3YDL078C MRPL22P53881 309 aa5.17□□□□□ -1.58
MDH3YDL078C ENA2Q01896 1091 aa5.17□□□□□ -1.58
MDH3YDL078C CTL1Q03220 320 aaKnown RBP5.17□□□□□ -1.58
MDH3YDL078C MRPS17Q03246 237 aaPredicted RBP5.17□□□□□ -1.58
MDH3YDL078C TY1A-DR2Q03964 440 aaKnown RBP5.17□□□□□ -1.58
MDH3YDL078C PEX12Q04370 399 aa5.17□□□□□ -1.58
MDH3YDL078C HOF1Q05080 669 aa5.17□□□□□ -1.58
MDH3YDL078C YLR224WQ05947 369 aa5.17□□□□□ -1.58
MDH3YDL078C YPR127WQ06494 345 aa5.17□□□□□ -1.58
MDH3YDL078C YPR147CQ06522 304 aaKnown RBP5.17□□□□□ -1.58
MDH3YDL078C SNA4Q07549 140 aa5.17□□□□□ -1.58
MDH3YDL078C RFU1Q08003 200 aa5.17□□□□□ -1.58
MDH3YDL078C YDL211CQ12121 372 aa5.17□□□□□ -1.58
MDH3YDL078C WTM1Q12363 437 aaKnown RBP5.17□□□□□ -1.58
MDH3YDL078C YOP1Q12402 180 aa5.17□□□□□ -1.58
MDH3YDL078C AGC1Q12482 902 aa5.17□□□□□ -1.58
MDH3YDL078C ENA5Q12691 1091 aa5.17□□□□□ -1.58
MDH3YDL078C ISN1Q99312 450 aa5.17□□□□□ -1.58
MDH3YDL078C Q0144Q9ZZW2 109 aa5.17□□□□□ -1.58
MDH3YDL078C TRP4P07285 380 aaPredicted RBP5.16□□□□□ -1.58
MDH3YDL078C RPS18AP0CX55 146 aaKnown RBP5.16□□□□□ -1.58
MDH3YDL078C RPS18BP0CX56 146 aaPredicted RBP5.16□□□□□ -1.58
MDH3YDL078C IDP1P21954 428 aaKnown RBP5.16□□□□□ -1.58
MDH3YDL078C RFA1P22336 621 aaKnown RBP5.16□□□□□ -1.58
MDH3YDL078C RPL24BP24000 155 aaKnown RBP5.16□□□□□ -1.58
MDH3YDL078C ERG9P29704 444 aa5.16□□□□□ -1.58
MDH3YDL078C LOT5P34234 306 aa5.16□□□□□ -1.58
MDH3YDL078C SSS1P35179 80 aa5.16□□□□□ -1.58
MDH3YDL078C LAG1P38703 411 aa5.16□□□□□ -1.58
MDH3YDL078C ARN2P38724 620 aa5.16□□□□□ -1.58
MDH3YDL078C ECM34P38728 170 aa5.16□□□□□ -1.58
MDH3YDL078C MIT1P40002 666 aa5.16□□□□□ -1.58
MDH3YDL078C YMR144WP40214 342 aaKnown RBP5.16□□□□□ -1.58
MDH3YDL078C REE1P40893 198 aa5.16□□□□□ -1.58
MDH3YDL078C YJR056CP47115 236 aa5.16□□□□□ -1.58
MDH3YDL078C SNN1P48232 102 aa5.16□□□□□ -1.58
MDH3YDL078C PUS4P48567 403 aaKnown RBP5.16□□□□□ -1.58
MDH3YDL078C HSV2P50079 448 aaPredicted RBP5.16□□□□□ -1.58
MDH3YDL078C YGL204CP53089 101 aa5.16□□□□□ -1.58
MDH3YDL078C MRH4P53166 561 aa5.16□□□□□ -1.58
MDH3YDL078C JAC1P53193 184 aa5.16□□□□□ -1.58
MDH3YDL078C YMR099CQ03161 297 aaKnown RBP5.16□□□□□ -1.58
MDH3YDL078C SDC1Q03323 175 aa5.16□□□□□ -1.58
MDH3YDL078C CAC2Q04199 468 aa5.16□□□□□ -1.58
MDH3YDL078C GIM5Q04493 163 aa5.16□□□□□ -1.58
MDH3YDL078C PHO92Q06390 306 aa5.16□□□□□ -1.58
MDH3YDL078C GPI11Q06636 219 aa5.16□□□□□ -1.58
MDH3YDL078C MCP1Q12106 302 aa5.16□□□□□ -1.58
MDH3YDL078C NPC2Q12408 173 aa5.16□□□□□ -1.58
MDH3YDL078C RPL31AP0C2H8 113 aaKnown RBP5.15□□□□□ -1.59
MDH3YDL078C RPL31BP0C2H9 113 aaKnown RBP5.15□□□□□ -1.59
MDH3YDL078C PRE1P22141 198 aaKnown RBP5.15□□□□□ -1.59
MDH3YDL078C RER1P25560 188 aa5.15□□□□□ -1.59
MDH3YDL078C LAC1P28496 418 aa5.15□□□□□ -1.59
MDH3YDL078C EHD3P28817 500 aa5.15□□□□□ -1.59
MDH3YDL078C IDH1P28834 360 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
MDH3YDL078C ARP2P32381 391 aaKnown RBP5.15□□□□□ -1.59
MDH3YDL078C RNP1P32385 249 aa5.15□□□□□ -1.59
MDH3YDL078C YNK1P36010 153 aaKnown RBP5.15□□□□□ -1.59
MDH3YDL078C YKL069WP36088 180 aa5.15□□□□□ -1.59
MDH3YDL078C RIB1P38066 345 aa5.15□□□□□ -1.59
MDH3YDL078C FIG1P38224 298 aa5.15□□□□□ -1.59
MDH3YDL078C RFC2P40348 353 aa5.15□□□□□ -1.59
MDH3YDL078C XBP1P40489 647 aa5.15□□□□□ -1.59
MDH3YDL078C YAE1P47118 141 aaPredicted RBP5.15□□□□□ -1.59
MDH3YDL078C NUP57P48837 541 aa5.15□□□□□ -1.59
MDH3YDL078C YNL095CP53932 642 aa5.15□□□□□ -1.59
MDH3YDL078C SAE3P89114 91 aa5.15□□□□□ -1.59
MDH3YDL078C NUP116Q02630 1113 aa5.15□□□□□ -1.59
MDH3YDL078C EKI1Q03764 534 aa5.15□□□□□ -1.59
MDH3YDL078C PFK27Q12471 397 aaPredicted RBP5.15□□□□□ -1.59
MDH3YDL078C PCC1Q3E833 88 aa5.15□□□□□ -1.59
MDH3YDL078C RIB3Q99258 208 aa5.15□□□□□ -1.59
MDH3YDL078C FLO9P39712 1322 aa5.15□□□□□ -1.59
MDH3YDL078C CDC39P25655 2108 aaKnown RBP5.14□□□□□ -1.59
MDH3YDL078C SSA3P09435 649 aaKnown RBP5.14□□□□□ -1.59
MDH3YDL078C HEM13P11353 328 aaKnown RBP5.14□□□□□ -1.59
MDH3YDL078C NHP6AP11632 93 aaKnown RBP5.14□□□□□ -1.59
MDH3YDL078C PDX1P16451 410 aa5.14□□□□□ -1.59
MDH3YDL078C RNA14P25298 677 aaKnown RBP5.14□□□□□ -1.59
MDH3YDL078C AHC2P25649 128 aa5.14□□□□□ -1.59
MDH3YDL078C ARO7P32178 256 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms