RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS20, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS20YBR254C NBP35P52920 328 aa1.7□□□□□ -2.14
TRS20YBR254C FMP41P53889 259 aaKnown RBP1.7□□□□□ -2.14
TRS20YBR254C SWS2P53937 143 aa1.7□□□□□ -2.14
TRS20YBR254C OSH6Q02201 448 aa1.7□□□□□ -2.14
TRS20YBR254C PAM18Q07914 168 aa1.7□□□□□ -2.14
TRS20YBR254C SGT2Q12118 346 aaKnown RBP1.7□□□□□ -2.14
TRS20YBR254C YPL119C-AQ3E751 87 aa1.7□□□□□ -2.14
TRS20YBR254C AI5_BETAQ9ZZX0 354 aa1.7□□□□□ -2.14
TRS20YBR254C STH1P32597 1359 aa1.7□□□□□ -2.14
TRS20YBR254C POX1P13711 748 aa1.69□□□□□ -2.14
TRS20YBR254C RNA15P25299 296 aaPredicted RBP1.69□□□□□ -2.14
TRS20YBR254C CSG2P35206 410 aa1.69□□□□□ -2.14
TRS20YBR254C JEN1P36035 616 aa1.69□□□□□ -2.14
TRS20YBR254C HMT1P38074 348 aa1.69□□□□□ -2.14
TRS20YBR254C MRX3P38172 270 aa1.69□□□□□ -2.14
TRS20YBR254C MED8P38304 223 aa1.69□□□□□ -2.14
TRS20YBR254C MED6P38782 295 aa1.69□□□□□ -2.14
TRS20YBR254C YER084WP40057 128 aa1.69□□□□□ -2.14
TRS20YBR254C DSN1P40568 576 aa1.69□□□□□ -2.14
TRS20YBR254C MIG2P53035 382 aa1.69□□□□□ -2.14
TRS20YBR254C YNL095CP53932 642 aa1.69□□□□□ -2.14
TRS20YBR254C PET117Q02771 107 aa1.69□□□□□ -2.14
TRS20YBR254C KRE28Q04431 385 aa1.69□□□□□ -2.14
TRS20YBR254C LOA1Q06508 300 aa1.69□□□□□ -2.14
TRS20YBR254C RRS1Q08746 203 aaKnown RBP1.69□□□□□ -2.14
TRS20YBR254C YOR029WQ12243 111 aa1.69□□□□□ -2.14
TRS20YBR254C PRR2Q12310 699 aa1.69□□□□□ -2.14
TRS20YBR254C SNU23Q12368 194 aaPredicted RBP1.69□□□□□ -2.14
TRS20YBR254C MRX4Q12467 430 aa1.69□□□□□ -2.14
TRS20YBR254C SNF8Q12483 233 aa1.69□□□□□ -2.14
TRS20YBR254C CDC42P19073 191 aa1.68□□□□□ -2.14
TRS20YBR254C YCR016WP25617 290 aaKnown RBP1.68□□□□□ -2.14
TRS20YBR254C HEK2P38199 381 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
TRS20YBR254C FZO1P38297 855 aa1.68□□□□□ -2.14
TRS20YBR254C YHL049CP38722 271 aa1.68□□□□□ -2.14
TRS20YBR254C NIF3P53081 288 aa1.68□□□□□ -2.14
TRS20YBR254C ALG9P53868 555 aaKnown RBP1.68□□□□□ -2.14
TRS20YBR254C AAH1P53909 347 aa1.68□□□□□ -2.14
TRS20YBR254C ASI3P53983 676 aa1.68□□□□□ -2.14
TRS20YBR254C SRL4Q03085 281 aa1.68□□□□□ -2.14
TRS20YBR254C YDR114CQ04597 100 aa1.68□□□□□ -2.14
TRS20YBR254C ATG17Q06410 417 aa1.68□□□□□ -2.14
TRS20YBR254C CDD1Q06549 142 aa1.68□□□□□ -2.14
TRS20YBR254C CSM4Q08955 156 aa1.68□□□□□ -2.14
TRS20YBR254C MSH5Q12175 901 aa1.68□□□□□ -2.14
TRS20YBR254C TIM22Q12328 207 aa1.68□□□□□ -2.14
TRS20YBR254C ATG31Q12421 196 aa1.68□□□□□ -2.14
TRS20YBR254C ISD11Q6Q560 94 aa1.68□□□□□ -2.14
TRS20YBR254C BMH1P29311 267 aaKnown RBP1.67□□□□□ -2.14
TRS20YBR254C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
TRS20YBR254C SSH1P38353 490 aaKnown RBP1.67□□□□□ -2.14
TRS20YBR254C SMB1P40018 196 aaKnown RBP1.67□□□□□ -2.14
TRS20YBR254C AGX1P43567 385 aa1.67□□□□□ -2.14
TRS20YBR254C NBP1P52919 319 aaPredicted RBP1.67□□□□□ -2.14
TRS20YBR254C BOP2Q06150 570 aa1.67□□□□□ -2.14
TRS20YBR254C TY3A-GQ12173 290 aa1.67□□□□□ -2.14
TRS20YBR254C SMT3Q12306 101 aaKnown RBP1.67□□□□□ -2.14
TRS20YBR254C TY3A-IQ99219 290 aa1.67□□□□□ -2.14
TRS20YBR254C NUP157P40064 1391 aaKnown RBP1.67□□□□□ -2.14
TRS20YBR254C HOM6P31116 359 aaKnown RBP1.66□□□□□ -2.14
TRS20YBR254C SGE1P33335 543 aa1.66□□□□□ -2.14
TRS20YBR254C CAB3P36076 571 aa1.66□□□□□ -2.14
TRS20YBR254C MRPL39P36533 70 aa1.66□□□□□ -2.14
TRS20YBR254C ARN2P38724 620 aa1.66□□□□□ -2.14
TRS20YBR254C TCD1P38756 429 aa1.66□□□□□ -2.14
TRS20YBR254C TEM1P38987 245 aa1.66□□□□□ -2.14
TRS20YBR254C GLG2P47011 380 aa1.66□□□□□ -2.14
TRS20YBR254C OST3P48439 350 aa1.66□□□□□ -2.14
TRS20YBR254C USE1P53146 245 aa1.66□□□□□ -2.14
TRS20YBR254C YLR283WQ05867 314 aa1.66□□□□□ -2.14
TRS20YBR254C YPR098CQ06089 161 aa1.66□□□□□ -2.14
TRS20YBR254C YPR147CQ06522 304 aaKnown RBP1.66□□□□□ -2.14
TRS20YBR254C PLB3Q08108 686 aa1.66□□□□□ -2.14
TRS20YBR254C SLD7Q08457 257 aa1.66□□□□□ -2.14
TRS20YBR254C RUD3Q12234 484 aaKnown RBP1.66□□□□□ -2.14
TRS20YBR254C YCT1Q12235 531 aa1.66□□□□□ -2.14
TRS20YBR254C PST1Q12355 444 aa1.66□□□□□ -2.14
TRS20YBR254C YBL008W-AQ3E821 79 aa1.66□□□□□ -2.14
TRS20YBR254C RSA4P25382 515 aaKnown RBP1.65□□□□□ -2.15
TRS20YBR254C SFC1P33303 322 aa1.65□□□□□ -2.15
TRS20YBR254C THO1P40040 218 aaKnown RBP1.65□□□□□ -2.15
TRS20YBR254C YER085CP40058 173 aa1.65□□□□□ -2.15
TRS20YBR254C SNZ3P43545 298 aa1.65□□□□□ -2.15
TRS20YBR254C YPL039WQ03080 316 aa1.65□□□□□ -2.15
TRS20YBR254C YOL019WQ08157 551 aa1.65□□□□□ -2.15
TRS20YBR254C BEM2P39960 2167 aaKnown RBP1.65□□□□□ -2.15
TRS20YBR254C HIS3P06633 220 aa1.64□□□□□ -2.15
TRS20YBR254C YKR104WP0CE69 306 aa1.64□□□□□ -2.15
TRS20YBR254C COS2P0CX12 379 aa1.64□□□□□ -2.15
TRS20YBR254C COS3P0CX13 379 aa1.64□□□□□ -2.15
TRS20YBR254C ZWF1P11412 505 aaKnown RBP1.64□□□□□ -2.15
TRS20YBR254C MRPL25P23369 157 aa1.64□□□□□ -2.15
TRS20YBR254C DPB2P24482 689 aaPredicted RBP1.64□□□□□ -2.15
TRS20YBR254C RNP1P32385 249 aa1.64□□□□□ -2.15
TRS20YBR254C MSN4P33749 630 aa1.64□□□□□ -2.15
TRS20YBR254C DRE2P36152 348 aa1.64□□□□□ -2.15
TRS20YBR254C MAL32P38158 584 aa1.64□□□□□ -2.15
TRS20YBR254C LDB7P38210 180 aa1.64□□□□□ -2.15
TRS20YBR254C CUE1P38428 203 aa1.64□□□□□ -2.15
TRS20YBR254C BFR1P38934 470 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms