RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 REEP2Q9BRK0 252 aa18.26■□□□□ 0.51
SREBF1-219ENST00000580540 PANK2Q9BZ23 570 aa18.26■□□□□ 0.51
SREBF1-219ENST00000580540 CXCL16Q9H2A7 254 aa18.26■□□□□ 0.51
SREBF1-219ENST00000580540 MARCH5Q9NX47 278 aa18.26■□□□□ 0.51
SREBF1-219ENST00000580540 LARSQ9P2J5 1176 aaKnown RBP18.26■□□□□ 0.51
SREBF1-219ENST00000580540 CACNG4Q9UBN1 327 aa18.26■□□□□ 0.51
SREBF1-219ENST00000580540 MYH11P35749 1972 aa18.25■□□□□ 0.51
SREBF1-219ENST00000580540 CASTOR2A6NHX0 329 aa18.25■□□□□ 0.51
SREBF1-219ENST00000580540 F8W810 466 aa18.25■□□□□ 0.51
SREBF1-219ENST00000580540 THP07101 528 aa18.25■□□□□ 0.51
SREBF1-219ENST00000580540 DDIT3P35638 169 aa18.25■□□□□ 0.51
SREBF1-219ENST00000580540 GIT2Q14161 759 aa18.25■□□□□ 0.51
SREBF1-219ENST00000580540 RRAGBQ5VZM2 374 aa18.25■□□□□ 0.51
SREBF1-219ENST00000580540 TAS1R1Q7RTX1 841 aa18.25■□□□□ 0.51
SREBF1-219ENST00000580540 GJD3Q8N144 294 aa18.25■□□□□ 0.51
SREBF1-219ENST00000580540 KRI1Q8N9T8 703 aaKnown RBP18.25■□□□□ 0.51
SREBF1-219ENST00000580540 TMEM161BQ8NDZ6 487 aa18.25■□□□□ 0.51
SREBF1-219ENST00000580540 LARP4BQ92615 738 aaKnown RBP18.25■□□□□ 0.51
SREBF1-219ENST00000580540 BICD1Q96G01 975 aa18.25■□□□□ 0.51
SREBF1-219ENST00000580540 NTPCRQ9BSD7 190 aaKnown RBP18.25■□□□□ 0.51
SREBF1-219ENST00000580540 CDT1Q9H211 546 aa18.25■□□□□ 0.51
SREBF1-219ENST00000580540 PTGESO14684 152 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 TBCAO75347 108 aaKnown RBP18.24■□□□□ 0.51
SREBF1-219ENST00000580540 TADA2AO75478 443 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 URODP06132 367 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 MAPTP10636 758 aaKnown RBP18.24■□□□□ 0.51
SREBF1-219ENST00000580540 MATR3P43243 847 aaKnown RBP eCLIP18.24■□□□□ 0.51
SREBF1-219ENST00000580540 YARSP54577 528 aaKnown RBP18.24■□□□□ 0.51
SREBF1-219ENST00000580540 COASYQ13057 564 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 PTPN14Q15678 1187 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 SMAD2Q15796 467 aaKnown RBP18.24■□□□□ 0.51
SREBF1-219ENST00000580540 GLRA4Q5JXX5 417 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 KIAA1841Q6NSI8 718 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 ANKRD54Q6NXT1 300 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 CEP120Q8N960 986 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 CASP10Q92851 521 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 ZBTB45Q96K62 511 aaPredicted RBP18.24■□□□□ 0.51
SREBF1-219ENST00000580540 CCDC94Q9BW85 323 aaPredicted RBP18.24■□□□□ 0.51
SREBF1-219ENST00000580540 CD320Q9NPF0 282 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 MRPL17Q9NRX2 175 aaKnown RBP18.24■□□□□ 0.51
SREBF1-219ENST00000580540 ANKFY1Q9P2R3 1169 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 STK39Q9UEW8 545 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 ODF2LQ9ULJ1 636 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 HCFC2Q9Y5Z7 792 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 ZMYM2Q9UBW7 1377 aa18.24■□□□□ 0.51
SREBF1-219ENST00000580540 H0YCG3 227 aa18.23■□□□□ 0.51
SREBF1-219ENST00000580540 SOD2P04179 222 aa18.23■□□□□ 0.51
SREBF1-219ENST00000580540 ZSCAN22P10073 491 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-219ENST00000580540 KLRC2P26717 231 aa18.23■□□□□ 0.51
SREBF1-219ENST00000580540 NASPP49321 788 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-219ENST00000580540 TUSC3Q13454 348 aa18.23■□□□□ 0.51
SREBF1-219ENST00000580540 MPZL3Q6UWV2 235 aa18.23■□□□□ 0.51
SREBF1-219ENST00000580540 HAUS6Q7Z4H7 955 aa18.23■□□□□ 0.51
SREBF1-219ENST00000580540 SMRP1Q8NCR6 262 aa18.23■□□□□ 0.51
SREBF1-219ENST00000580540 HASPINQ8TF76 798 aa18.23■□□□□ 0.51
SREBF1-219ENST00000580540 PAAF1Q9BRP4 392 aa18.23■□□□□ 0.51
SREBF1-219ENST00000580540 HERC2P3Q9BVR0 1158 aa18.23■□□□□ 0.51
SREBF1-219ENST00000580540 EMILIN2Q9BXX0 1053 aa18.23■□□□□ 0.51
SREBF1-219ENST00000580540 PARVGQ9HBI0 331 aa18.23■□□□□ 0.51
SREBF1-219ENST00000580540 PTPRHQ9HD43 1115 aa18.23■□□□□ 0.51
SREBF1-219ENST00000580540 DAXXQ9UER7 740 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-219ENST00000580540 USP15Q9Y4E8 981 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-219ENST00000580540 SPDYE4A6NLX3 237 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 K7ENM7 598 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 SPTLC2O15270 562 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 MCF2P10911 925 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 GRM5P41594 1212 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 GLUD2P49448 558 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 ZP2Q05996 745 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 KCNC3Q14003 757 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 HSP90AA2PQ14568 343 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-219ENST00000580540 FUT10Q6P4F1 479 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 TMEM184AQ6ZMB5 413 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 DYMQ7RTS9 669 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 ADHFE1Q8IWW8 467 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 LINC00301Q8NCQ3 95 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 B3GALT6Q96L58 329 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 KLHL5Q96PQ7 755 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 TOPORSQ9NS56 1045 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-219ENST00000580540 STK17AQ9UEE5 414 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 PRKAG3Q9UGI9 489 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 ADAM28Q9UKQ2 775 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 IRAK3Q9Y616 596 aa18.22■□□□□ 0.51
SREBF1-219ENST00000580540 TRAK2O60296 914 aa18.21■□□□□ 0.51
SREBF1-219ENST00000580540 TOM1L1O75674 476 aa18.21■□□□□ 0.51
SREBF1-219ENST00000580540 F13A1P00488 732 aa18.21■□□□□ 0.51
SREBF1-219ENST00000580540 CNPP09543 421 aaKnown RBP18.21■□□□□ 0.51
SREBF1-219ENST00000580540 PDIA4P13667 645 aaKnown RBP18.21■□□□□ 0.51
SREBF1-219ENST00000580540 EPCAMP16422 314 aa18.21■□□□□ 0.51
SREBF1-219ENST00000580540 STAT6P42226 847 aa18.21■□□□□ 0.51
SREBF1-219ENST00000580540 NCKAP1LP55160 1127 aa18.21■□□□□ 0.51
SREBF1-219ENST00000580540 SEZ6Q53EL9 994 aa18.21■□□□□ 0.51
SREBF1-219ENST00000580540 SYCE2Q6PIF2 218 aa18.21■□□□□ 0.51
SREBF1-219ENST00000580540 CCDC73Q6ZRK6 1079 aa18.21■□□□□ 0.51
SREBF1-219ENST00000580540 SV2BQ7L1I2 683 aa18.21■□□□□ 0.51
SREBF1-219ENST00000580540 PDILTQ8N807 584 aa18.21■□□□□ 0.51
SREBF1-219ENST00000580540 ACAP3Q96P50 834 aa18.21■□□□□ 0.51
SREBF1-219ENST00000580540 GPR62Q9BZJ7 368 aa18.21■□□□□ 0.51
SREBF1-219ENST00000580540 SSX2IPQ9Y2D8 614 aa18.21■□□□□ 0.51
SREBF1-219ENST00000580540 CLDN3O15551 220 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms