RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 EIF3DO15371 548 aaKnown RBP eCLIP13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 MEFVO15553 781 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 FAM189A1O60320 539 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 RECQL4O94761 1208 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 DDHD2O94830 711 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 RHOBTB3O94955 611 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 RB1P06400 928 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 HARSP12081 509 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 KCNB1Q14721 858 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 NOLC1Q14978 699 aaKnown RBP eCLIP13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 SPOUT1Q5T280 376 aaKnown RBP13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 SLFN12LQ6IEE8 588 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 ALKAL1Q6UXT8 129 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 STXBP4Q6ZWJ1 553 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 LRRC43Q8N309 656 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 KIAA0895Q8NCT3 520 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 URGCPQ8TCY9 931 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 ERCC4Q92889 916 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 GUCD1Q96NT3 240 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 GBP4Q96PP9 640 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 CDX2Q99626 313 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 NRDE2Q9H7Z3 1164 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 TMEM206Q9H813 350 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 EXOC1Q9NV70 894 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 RWDD3Q9Y3V2 267 aa13.06□□□□□ -0.32
RABGGTA-218ENST00000560777 H3BNC9 293 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 PTGESO14684 152 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 B4GALT3O60512 393 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 LPXNO60711 386 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 KINO60870 393 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 CTNNB1P35222 781 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 SCNN1GP51170 649 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 RNASELQ05823 741 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 SLC10A6Q3KNW5 377 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 XKR4Q5GH76 650 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 ZBTB41Q5SVQ8 909 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 SYCP3Q8IZU3 236 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 COLGALT1Q8NBJ5 622 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 FBXO22Q8NEZ5 403 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 SPATA20Q8TB22 786 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 ACAP3Q96P50 834 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 MSTO1Q9BUK6 570 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 CCDC94Q9BW85 323 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 PLVAPQ9BX97 442 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 DNAJB4Q9UDY4 337 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 PLAGL2Q9UPG8 496 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 PCDHA5Q9Y5H7 936 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 ZMYM2Q9UBW7 1377 aa13.05□□□□□ -0.32
RABGGTA-218ENST00000560777 OGTO15294 1046 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 TGFB1I1O43294 461 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 GALTP07902 379 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 CLTAP09496 248 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 LAG3P18627 525 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 PBX3P40426 434 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 TNFSF9P41273 254 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 YARSP54577 528 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 BCAR1P56945 870 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 DSC1Q08554 894 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 GPM6BQ13491 265 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 ADGRE1Q14246 886 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 KYAT1Q16773 422 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 BMT2Q1RMZ1 405 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 KCNT2Q6UVM3 1135 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 NELFCDQ8IXH7 590 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 COLGALT2Q8IYK4 626 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 KLHL23Q8NBE8 558 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 POMGNT1Q8WZA1 660 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 P2RX5Q93086 422 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 CCDC47Q96A33 483 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 GSDMAQ96QA5 445 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 GBP3Q9H0R5 595 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 AAASQ9NRG9 546 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 HOOK1Q9UJC3 728 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 CPSF3Q9UKF6 684 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 AGO2Q9UKV8 859 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 PCDHB12Q9Y5F1 795 aa13.04□□□□□ -0.32
RABGGTA-218ENST00000560777 SMIM28A0A1B0GU29 152 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 NT5C1B-RDH14C9J2C7 533 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 ZC3H11AO75152 810 aaKnown RBP eCLIP13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 SMC2O95347 1197 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 ALDH2P05091 517 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 ITGB1P05556 798 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 THP07101 528 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 ADRB2P07550 413 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 GARTP22102 1010 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 ALDH7A1P49419 539 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 ACOT2P49753 483 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 NAB2Q15742 525 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 KNOP1Q1ED39 458 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 CRELD2Q6UXH1 353 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 ZSWIM2Q8NEG5 633 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 SPPL3Q8TCT6 385 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 GDPD5Q8WTR4 605 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 MYLIPQ8WY64 445 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 SMARCE1Q969G3 411 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 SNX27Q96L92 541 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 ZMAT2Q96NC0 199 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 ZNF558Q96NG5 402 aa13.03□□□□□ -0.32
RABGGTA-218ENST00000560777 FAM193BQ96PV7 902 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms