RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CAMK1Q14012 370 aa19.58■□□□□ 0.72
DDX55-204ENST00000536079 L1TD1Q5T7N2 865 aaKnown RBP19.58■□□□□ 0.72
DDX55-204ENST00000536079 KCNT2Q6UVM3 1135 aa19.58■□□□□ 0.72
DDX55-204ENST00000536079 TMEM130Q8N3G9 435 aa19.58■□□□□ 0.72
DDX55-204ENST00000536079 UBN1Q9NPG3 1134 aa19.58■□□□□ 0.72
DDX55-204ENST00000536079 NLRC5Q86WI3 1866 aa19.58■□□□□ 0.72
DDX55-204ENST00000536079 GOLGA6L4A6NEF3 574 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 F8W810 466 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 HNRNPDLO14979 420 aaKnown RBP19.57■□□□□ 0.72
DDX55-204ENST00000536079 ZC3H11AO75152 810 aaKnown RBP eCLIP19.57■□□□□ 0.72
DDX55-204ENST00000536079 RB1P06400 928 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 LAG3P18627 525 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 ADSSP30520 456 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 TNFSF9P41273 254 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 SLC11A1P49279 550 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 BCAR1P56945 870 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 DPYDQ12882 1025 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 NOLC1Q14978 699 aaKnown RBP eCLIP19.57■□□□□ 0.72
DDX55-204ENST00000536079 KMT5BQ4FZB7 885 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 EPM2AIP1Q7L775 607 aaPredicted RBP19.57■□□□□ 0.72
DDX55-204ENST00000536079 ZSWIM2Q8NEG5 633 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 SPPL3Q8TCT6 385 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 URGCPQ8TCY9 931 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 RABGGTAQ92696 567 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 MRPL9Q9BYD2 267 aaKnown RBP19.57■□□□□ 0.72
DDX55-204ENST00000536079 SLC39A2Q9NP94 309 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 STXBP5LQ9Y2K9 1186 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 MYO9BQ13459 2157 aa19.57■□□□□ 0.72
DDX55-204ENST00000536079 A0A0B4J269 797 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 PVALEFA0A1B0GWK0 134 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 CLDN3O15551 220 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 GALTP07902 379 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 IGFBP6P24592 240 aaPredicted RBP19.56■□□□□ 0.72
DDX55-204ENST00000536079 FAM160A1Q05DH4 1040 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 NAB2Q15742 525 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 FAM26FQ5R3K3 315 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 ALKAL1Q6UXT8 129 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 COLGALT2Q8IYK4 626 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 HACE1Q8IYU2 909 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 SLC39A11Q8N1S5 342 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 SLC17A8Q8NDX2 589 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 ERCC4Q92889 916 aaPredicted RBP19.56■□□□□ 0.72
DDX55-204ENST00000536079 GAS2L1Q99501 681 aaPredicted RBP19.56■□□□□ 0.72
DDX55-204ENST00000536079 PLVAPQ9BX97 442 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 RWDD3Q9Y3V2 267 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 PCDHGC5Q9Y5F6 944 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 STYXL1Q9Y6J8 313 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 RALGAPA2Q2PPJ7 1873 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 ZMYM2Q9UBW7 1377 aa19.56■□□□□ 0.72
DDX55-204ENST00000536079 FGF18O76093 207 aa19.55■□□□□ 0.72
DDX55-204ENST00000536079 POU3F3P20264 500 aaPredicted RBP19.55■□□□□ 0.72
DDX55-204ENST00000536079 SCP2P22307 547 aa19.55■□□□□ 0.72
DDX55-204ENST00000536079 MATR3P43243 847 aaKnown RBP eCLIP19.55■□□□□ 0.72
DDX55-204ENST00000536079 RNASELQ05823 741 aaKnown RBP19.55■□□□□ 0.72
DDX55-204ENST00000536079 DSC1Q08554 894 aa19.55■□□□□ 0.72
DDX55-204ENST00000536079 STK4Q13043 487 aa19.55■□□□□ 0.72
DDX55-204ENST00000536079 SLC10A6Q3KNW5 377 aa19.55■□□□□ 0.72
DDX55-204ENST00000536079 GLRA4Q5JXX5 417 aa19.55■□□□□ 0.72
DDX55-204ENST00000536079 KIAA0895Q8NCT3 520 aa19.55■□□□□ 0.72
DDX55-204ENST00000536079 SCFD1Q8WVM8 642 aa19.55■□□□□ 0.72
DDX55-204ENST00000536079 P2RX5Q93086 422 aa19.55■□□□□ 0.72
DDX55-204ENST00000536079 HVCN1Q96D96 273 aa19.55■□□□□ 0.72
DDX55-204ENST00000536079 ZMAT2Q96NC0 199 aaKnown RBP19.55■□□□□ 0.72
DDX55-204ENST00000536079 ZNF558Q96NG5 402 aa19.55■□□□□ 0.72
DDX55-204ENST00000536079 ACCSQ96QU6 501 aa19.55■□□□□ 0.72
DDX55-204ENST00000536079 C11orf84Q9BUA3 381 aaPredicted RBP19.55■□□□□ 0.72
DDX55-204ENST00000536079 PCDHB13Q9Y5F0 798 aa19.55■□□□□ 0.72
DDX55-204ENST00000536079 PCDHB12Q9Y5F1 795 aa19.55■□□□□ 0.72
DDX55-204ENST00000536079 PRPF40AO75400 957 aaKnown RBP19.54■□□□□ 0.72
DDX55-204ENST00000536079 RPN1P04843 607 aaKnown RBP19.54■□□□□ 0.72
DDX55-204ENST00000536079 IRS1P35568 1242 aa19.54■□□□□ 0.72
DDX55-204ENST00000536079 PNOCQ13519 176 aa19.54■□□□□ 0.72
DDX55-204ENST00000536079 CCDC85BQ15834 202 aaPredicted RBP19.54■□□□□ 0.72
DDX55-204ENST00000536079 XKR4Q5GH76 650 aa19.54■□□□□ 0.72
DDX55-204ENST00000536079 CLEC17AQ6ZS10 378 aa19.54■□□□□ 0.72
DDX55-204ENST00000536079 MICALL1Q8N3F8 863 aa19.54■□□□□ 0.72
DDX55-204ENST00000536079 ZNF507Q8TCN5 953 aa19.54■□□□□ 0.72
DDX55-204ENST00000536079 POF1BQ8WVV4 589 aa19.54■□□□□ 0.72
DDX55-204ENST00000536079 SNX27Q96L92 541 aa19.54■□□□□ 0.72
DDX55-204ENST00000536079 ACAP3Q96P50 834 aa19.54■□□□□ 0.72
DDX55-204ENST00000536079 PAAF1Q9BRP4 392 aa19.54■□□□□ 0.72
DDX55-204ENST00000536079 CCDC94Q9BW85 323 aaPredicted RBP19.54■□□□□ 0.72
DDX55-204ENST00000536079 VN1R3Q9BXE9 311 aa19.54■□□□□ 0.72
DDX55-204ENST00000536079 AAASQ9NRG9 546 aa19.54■□□□□ 0.72
DDX55-204ENST00000536079 MARCH5Q9NX47 278 aa19.54■□□□□ 0.72
DDX55-204ENST00000536079 KANSL3Q9P2N6 904 aa19.54■□□□□ 0.72
DDX55-204ENST00000536079 CXCL8P10145 99 aa19.53■□□□□ 0.72
DDX55-204ENST00000536079 NELFCDQ8IXH7 590 aa19.53■□□□□ 0.72
DDX55-204ENST00000536079 PPM1EQ8WY54 764 aa19.53■□□□□ 0.72
DDX55-204ENST00000536079 MSTO1Q9BUK6 570 aa19.53■□□□□ 0.72
DDX55-204ENST00000536079 SPG21Q9NZD8 308 aa19.53■□□□□ 0.72
DDX55-204ENST00000536079 PRUNE2Q8WUY3 3088 aa19.53■□□□□ 0.72
DDX55-204ENST00000536079 SMIM28A0A1B0GU29 152 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 NRP1O14786 923 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 OGTO15294 1046 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 TGFB1I1O43294 461 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 ABCD1P33897 745 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 ACOT2P49753 483 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 WNT7BP56706 349 aa19.52■□□□□ 0.72
DDX55-204ENST00000536079 ERVFC1P60507 584 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms