RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 MAP3K12Q12852 859 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 MALLQ13021 153 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 LSAMPQ13449 338 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 TMEM132BQ14DG7 1078 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 EPHA7Q15375 998 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 SEC23AQ15436 765 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 GRIK5Q16478 980 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 TTC31Q49AM3 519 aaPredicted RBP4.53□□□□□ -1.68
SKP1-209ENST00000522552 SLC9C2Q5TAH2 1124 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 RCSD1Q6JBY9 416 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 ACAD10Q6JQN1 1059 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 KLHDC10Q6PID8 442 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 CPLX2Q6PUV4 134 aaKnown RBP4.53□□□□□ -1.68
SKP1-209ENST00000522552 CATSPER4Q7RTX7 472 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 DNAJB7Q7Z6W7 309 aaPredicted RBP4.53□□□□□ -1.68
SKP1-209ENST00000522552 CHD1LQ86WJ1 897 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 ERC1Q8IUD2 1116 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 CREG2Q8IUH2 290 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 PLD6Q8N2A8 252 aaKnown RBP4.53□□□□□ -1.68
SKP1-209ENST00000522552 NAT8LQ8N9F0 302 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 OTUD7AQ8TE49 926 aaPredicted RBP4.53□□□□□ -1.68
SKP1-209ENST00000522552 SH3RF2Q8TEC5 729 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 CREB3L4Q8TEY5 395 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 DPF3Q92784 378 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 DPF2Q92785 391 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 ATP2A3Q93084 1043 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 HDAC10Q969S8 669 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 NSUN4Q96CB9 384 aaKnown RBP4.53□□□□□ -1.68
SKP1-209ENST00000522552 MTFMTQ96DP5 389 aaKnown RBP4.53□□□□□ -1.68
SKP1-209ENST00000522552 SPATA17Q96L03 361 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 YME1L1Q96TA2 773 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 MMP19Q99542 508 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 MIPEPQ99797 713 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 GPATCH1Q9BRR8 931 aaKnown RBP4.53□□□□□ -1.68
SKP1-209ENST00000522552 SIL1Q9H173 461 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 GRPEL1Q9HAV7 217 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 SAYSD1Q9NPB0 183 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 DIAPH3Q9NSV4 1193 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 COL20A1Q9P218 1284 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 TMPRSS11EQ9UL52 423 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 PCDHB1Q9Y5F3 818 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 CFAP20Q9Y6A4 193 aaKnown RBP4.53□□□□□ -1.68
SKP1-209ENST00000522552 CCDC196A0A1B0GTZ2 297 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 H3BUI4 141 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 RTCAO00442 366 aaKnown RBP4.52□□□□□ -1.69
SKP1-209ENST00000522552 MYO1BO43795 1136 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 ADAM11O75078 769 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 RGS9O75916 674 aaPredicted RBP4.52□□□□□ -1.69
SKP1-209ENST00000522552 TMEM63AO94886 807 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 A1BGP04217 495 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 KRT1P04264 644 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 GNAT1P11488 350 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 COL6A2P12110 1019 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 NPR1P16066 1061 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 ATF7P17544 494 aaPredicted RBP4.52□□□□□ -1.69
SKP1-209ENST00000522552 IL11P20809 199 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 CHMP24386 653 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 MAPK4P31152 587 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 STAT5AP42229 794 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 WASP42768 502 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 HK3P52790 923 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 IFI35P80217 286 aaPredicted RBP4.52□□□□□ -1.69
SKP1-209ENST00000522552 NOGQ13253 232 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 TRIM25Q14258 630 aaKnown RBP4.52□□□□□ -1.69
SKP1-209ENST00000522552 PLS1Q14651 629 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 RASA2Q15283 850 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 UBE3CQ15386 1083 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 RAB30Q15771 203 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 UBXN11Q5T124 520 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 THEMIS2Q5TEJ8 643 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 EEF1DP3Q658K8 133 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 ZNF765Q7L2R6 523 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 LYSMD2Q8IV50 215 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 ADGRG2Q8IZP9 1017 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 CYP2W1Q8TAV3 490 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 NUDT8Q8WV74 236 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 IQCDQ96DY2 449 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 NCAPGQ9BPX3 1015 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 TM7SF3Q9NS93 570 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 CLDND1Q9NY35 253 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 TMOD4Q9NZQ9 345 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 C19orf53Q9UNZ5 99 aaPredicted RBP4.52□□□□□ -1.69
SKP1-209ENST00000522552 AP4E1Q9UPM8 1137 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 DAGLAQ9Y4D2 1042 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 PCDHGB5Q9Y5G0 923 aa4.52□□□□□ -1.69
SKP1-209ENST00000522552 NPHP3-ACAD11A0A0J9YXS1 232 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 CPLX1O14810 134 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 NKRFO15226 690 aaKnown RBP eCLIP4.51□□□□□ -1.691e-7■□□□□ 8.2
SKP1-209ENST00000522552 RNGTTO60942 597 aaKnown RBP4.51□□□□□ -1.69
SKP1-209ENST00000522552 TGDSO95455 350 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 ITGA5P08648 1049 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 HNRNPA1P09651 372 aaKnown RBP eCLIP4.51□□□□□ -1.69
SKP1-209ENST00000522552 PAMP19021 973 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 ETV3P41162 512 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 CHRNDQ07001 517 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 PTPN14Q15678 1187 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 ATP2B3Q16720 1220 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 C3orf38Q5JPI3 329 aa4.51□□□□□ -1.69
SKP1-209ENST00000522552 HABP4Q5JVS0 413 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms