RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 SV2BQ7L1I2 683 aa23.39■■□□□ 1.33
UBE2D3-229ENST00000510129 KCNG4Q8TDN1 519 aa23.39■■□□□ 1.33
UBE2D3-229ENST00000510129 CASP10Q92851 521 aa23.39■■□□□ 1.33
UBE2D3-229ENST00000510129 CLIC6Q96NY7 704 aa23.39■■□□□ 1.33
UBE2D3-229ENST00000510129 EMILIN2Q9BXX0 1053 aa23.39■■□□□ 1.33
UBE2D3-229ENST00000510129 MRPL17Q9NRX2 175 aaKnown RBP23.39■■□□□ 1.33
UBE2D3-229ENST00000510129 MIOSQ9NXC5 875 aa23.39■■□□□ 1.33
UBE2D3-229ENST00000510129 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 LINC01565O15544 149 aa23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 TRAK2O60296 914 aa23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 B4GALT3O60512 393 aa23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 SOD2P04179 222 aa23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 PROZP22891 400 aa23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 KYAT1Q16773 422 aa23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 SPECC1Q5M775 1068 aa23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 TAS1R3Q7RTX0 852 aa23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 HAUS6Q7Z4H7 955 aa23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 GPR65Q8IYL9 337 aa23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 MSLNLQ96KJ4 702 aa23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 TARS2Q9BW92 718 aaKnown RBP23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 LRRC27Q9C0I9 530 aa23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 PRG3Q9Y2Y8 225 aaPredicted RBP23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.38■■□□□ 1.33
UBE2D3-229ENST00000510129 NPHP3-ACAD11A0A0J9YXS1 232 aa23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 URODP06132 367 aa23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 STAT6P42226 847 aa23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 DLX2Q07687 328 aaPredicted RBP23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 KCNC3Q14003 757 aa23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 SMAD2Q15796 467 aaKnown RBP23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 USP49Q70CQ1 688 aa23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 FAM178BQ8IXR5 827 aa23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 BCL7CQ8WUZ0 217 aaPredicted RBP23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 POP1Q99575 1024 aaKnown RBP23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 HERC2P3Q9BVR0 1158 aa23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 CDT1Q9H211 546 aa23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 SLC38A7Q9NVC3 462 aa23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 CLEC1BQ9P126 229 aa23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 SEL1LQ9UBV2 794 aa23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 GDAQ9Y2T3 454 aa23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 MYO7AQ13402 2215 aa23.37■■□□□ 1.33
UBE2D3-229ENST00000510129 K7ENM7 598 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 CLDN3O15551 220 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 MBTPS2O43462 519 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 CUTAO60888 179 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 GLP2RO95838 553 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 CACNB1Q02641 598 aaPredicted RBP23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 CREMQ03060 361 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 NOLC1Q14978 699 aaKnown RBP eCLIP23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 ELMSAN1Q6PJG2 1045 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 SMRP1Q8NCR6 262 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 BICD1Q96G01 975 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 UROC1Q96N76 676 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 ACAP3Q96P50 834 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 CUEDC2Q9H467 287 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 ZHX3Q9H4I2 956 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 MARCH5Q9NX47 278 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 TFIP11Q9UBB9 837 aaKnown RBP23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 ADAM28Q9UKQ2 775 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 USP20Q9Y2K6 914 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 BRWD1Q9NSI6 2320 aa23.36■■□□□ 1.33
UBE2D3-229ENST00000510129 PTGESO14684 152 aa23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 IL9P15248 144 aa23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 GAP43P17677 238 aa23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 GLUD2P49448 558 aa23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 ELAVL2Q12926 359 aaKnown RBP23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 BECN1Q14457 450 aa23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 HSP90AA2PQ14568 343 aaPredicted RBP23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 PTPN14Q15678 1187 aa23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 TPRNQ4KMQ1 711 aa23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 KIAA1841Q6NSI8 718 aa23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 LRRC15Q8TF66 581 aa23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 ST6GALNAC4Q9H4F1 302 aa23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 DZANK1Q9NVP4 752 aa23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 DPP7Q9UHL4 492 aa23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 BARX2Q9UMQ3 279 aaPredicted RBP23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 TBX20Q9UMR3 447 aa23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 REV3LO60673 3130 aa23.35■■□□□ 1.33
UBE2D3-229ENST00000510129 SF3B1O75533 1304 aaKnown RBP eCLIP23.34■■□□□ 1.332e-6■■■■■ 58.5
UBE2D3-229ENST00000510129 TCF20Q9UGU0 1960 aaKnown RBP23.34■■□□□ 1.33
UBE2D3-229ENST00000510129 HNRNPDLO14979 420 aaKnown RBP23.34■■□□□ 1.33
UBE2D3-229ENST00000510129 CLASP2O75122 1294 aaKnown RBP23.34■■□□□ 1.33
UBE2D3-229ENST00000510129 TADA2AO75478 443 aa23.34■■□□□ 1.33
UBE2D3-229ENST00000510129 LIG4P49917 911 aa23.34■■□□□ 1.33
UBE2D3-229ENST00000510129 ANKRD54Q6NXT1 300 aa23.34■■□□□ 1.33
UBE2D3-229ENST00000510129 ZBTB33Q86T24 672 aa23.34■■□□□ 1.33
UBE2D3-229ENST00000510129 RNF168Q8IYW5 571 aaPredicted RBP23.34■■□□□ 1.33
UBE2D3-229ENST00000510129 HVCN1Q96D96 273 aa23.34■■□□□ 1.33
UBE2D3-229ENST00000510129 VN1R3Q9BXE9 311 aa23.34■■□□□ 1.33
UBE2D3-229ENST00000510129 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.34■■□□□ 1.33
UBE2D3-229ENST00000510129 ANKFY1Q9P2R3 1169 aa23.34■■□□□ 1.33
UBE2D3-229ENST00000510129 ATP6V1DQ9Y5K8 247 aa23.34■■□□□ 1.33
UBE2D3-229ENST00000510129 HCFC2Q9Y5Z7 792 aa23.34■■□□□ 1.33
UBE2D3-229ENST00000510129 EFEMP2O95967 443 aa23.33■■□□□ 1.33
UBE2D3-229ENST00000510129 C1RP00736 705 aa23.33■■□□□ 1.33
UBE2D3-229ENST00000510129 PIGRP01833 764 aa23.33■■□□□ 1.33
UBE2D3-229ENST00000510129 MATR3P43243 847 aaKnown RBP eCLIP23.33■■□□□ 1.33
UBE2D3-229ENST00000510129 MCL1Q07820 350 aa23.33■■□□□ 1.33
UBE2D3-229ENST00000510129 CLUL1Q15846 466 aa23.33■■□□□ 1.33
UBE2D3-229ENST00000510129 USP41Q3LFD5 358 aa23.33■■□□□ 1.33
UBE2D3-229ENST00000510129 XKR4Q5GH76 650 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms