RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 TBC1D17Q9HA65 648 aa14.68□□□□□ -0.06
SRRT-206ENST00000460194 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.68□□□□□ -0.06
SRRT-206ENST00000460194 PDRG1Q9NUG6 133 aa14.68□□□□□ -0.06
SRRT-206ENST00000460194 SPDYE4A6NLX3 237 aa14.67□□□□□ -0.06
SRRT-206ENST00000460194 PTGESO14684 152 aa14.67□□□□□ -0.06
SRRT-206ENST00000460194 SPATA31C1P0DKV0 1188 aa14.67□□□□□ -0.06
SRRT-206ENST00000460194 GRIK3Q13003 919 aa14.67□□□□□ -0.06
SRRT-206ENST00000460194 SLC27A1Q6PCB7 646 aa14.67□□□□□ -0.06
SRRT-206ENST00000460194 PRSS55Q6UWB4 352 aaPredicted RBP14.67□□□□□ -0.06
SRRT-206ENST00000460194 MAML2Q8IZL2 1156 aaPredicted RBP14.67□□□□□ -0.06
SRRT-206ENST00000460194 LNX1Q8TBB1 728 aaPredicted RBP14.67□□□□□ -0.06
SRRT-206ENST00000460194 MTMR9Q96QG7 549 aa14.67□□□□□ -0.06
SRRT-206ENST00000460194 SEMA4AQ9H3S1 761 aa14.67□□□□□ -0.06
SRRT-206ENST00000460194 FBXW11Q9UKB1 542 aa14.67□□□□□ -0.06
SRRT-206ENST00000460194 CA14Q9ULX7 337 aa14.67□□□□□ -0.06
SRRT-206ENST00000460194 NUMBLQ9Y6R0 609 aa14.67□□□□□ -0.06
SRRT-206ENST00000460194 GPR179Q6PRD1 2367 aa14.67□□□□□ -0.06
SRRT-206ENST00000460194 XRCC6P12956 609 aaKnown RBP eCLIP14.66□□□□□ -0.06
SRRT-206ENST00000460194 ID4P47928 161 aa14.66□□□□□ -0.06
SRRT-206ENST00000460194 STARD6P59095 220 aa14.66□□□□□ -0.06
SRRT-206ENST00000460194 TFDP1Q14186 410 aa14.66□□□□□ -0.06
SRRT-206ENST00000460194 FAM187BQ17R55 369 aa14.66□□□□□ -0.06
SRRT-206ENST00000460194 CDCA2Q69YH5 1023 aaPredicted RBP14.66□□□□□ -0.06
SRRT-206ENST00000460194 ST13P5Q8NFI4 369 aaPredicted RBP14.66□□□□□ -0.06
SRRT-206ENST00000460194 RIN2Q8WYP3 895 aaPredicted RBP14.66□□□□□ -0.06
SRRT-206ENST00000460194 FGF14Q92915 247 aa14.66□□□□□ -0.06
SRRT-206ENST00000460194 DDX23Q9BUQ8 820 aaKnown RBP14.66□□□□□ -0.06
SRRT-206ENST00000460194 APOL6Q9BWW8 343 aa14.66□□□□□ -0.06
SRRT-206ENST00000460194 FZD8Q9H461 694 aa14.66□□□□□ -0.06
SRRT-206ENST00000460194 ARHGEF3Q9NR81 526 aa14.66□□□□□ -0.06
SRRT-206ENST00000460194 KLK14Q9P0G3 267 aa14.66□□□□□ -0.06
SRRT-206ENST00000460194 PCDHA12Q9UN75 941 aa14.66□□□□□ -0.06
SRRT-206ENST00000460194 A0A087WWV3 80 aa14.65□□□□□ -0.06
SRRT-206ENST00000460194 POTEMA6NI47 508 aa14.65□□□□□ -0.06
SRRT-206ENST00000460194 ADAM12O43184 909 aa14.65□□□□□ -0.06
SRRT-206ENST00000460194 CDKL5O76039 1030 aa14.65□□□□□ -0.06
SRRT-206ENST00000460194 NPTXRO95502 500 aa14.65□□□□□ -0.06
SRRT-206ENST00000460194 LMNAP02545 664 aaKnown RBP14.65□□□□□ -0.06
SRRT-206ENST00000460194 EDN1P05305 212 aa14.65□□□□□ -0.06
SRRT-206ENST00000460194 DCNP07585 359 aaKnown RBP14.65□□□□□ -0.06
SRRT-206ENST00000460194 IGFBP6P24592 240 aaPredicted RBP14.65□□□□□ -0.06
SRRT-206ENST00000460194 TUSC3Q13454 348 aa14.65□□□□□ -0.06
SRRT-206ENST00000460194 HSP90AA2PQ14568 343 aaPredicted RBP14.65□□□□□ -0.06
SRRT-206ENST00000460194 ELMSAN1Q6PJG2 1045 aa14.65□□□□□ -0.06
SRRT-206ENST00000460194 POTEHQ6S545 545 aa14.65□□□□□ -0.06
SRRT-206ENST00000460194 PARM1Q6UWI2 310 aa14.65□□□□□ -0.06
SRRT-206ENST00000460194 GLYCTKQ8IVS8 523 aa14.65□□□□□ -0.06
SRRT-206ENST00000460194 PIK3R5Q8WYR1 880 aa14.65□□□□□ -0.06
SRRT-206ENST00000460194 TTC12Q9H892 705 aaPredicted RBP14.65□□□□□ -0.06
SRRT-206ENST00000460194 GPRC5CQ9NQ84 441 aa14.65□□□□□ -0.06
SRRT-206ENST00000460194 SIT1Q9Y3P8 196 aa14.65□□□□□ -0.06
SRRT-206ENST00000460194 ZFP37Q9Y6Q3 630 aaPredicted RBP14.65□□□□□ -0.06
SRRT-206ENST00000460194 R4GN57 208 aa14.65□□□□□ -0.06
SRRT-206ENST00000460194 LRRN2O75325 713 aa14.64□□□□□ -0.07
SRRT-206ENST00000460194 NR1I2O75469 434 aa14.64□□□□□ -0.07
SRRT-206ENST00000460194 KIF4AO95239 1232 aa14.64□□□□□ -0.07
SRRT-206ENST00000460194 BAG4O95429 457 aaKnown RBP14.64□□□□□ -0.07
SRRT-206ENST00000460194 SP9P0CG40 484 aa14.64□□□□□ -0.07
SRRT-206ENST00000460194 HOXA9P31269 272 aa14.64□□□□□ -0.07
SRRT-206ENST00000460194 GPC5P78333 572 aa14.64□□□□□ -0.07
SRRT-206ENST00000460194 NTHL1P78549 312 aa14.64□□□□□ -0.07
SRRT-206ENST00000460194 CREMQ03060 361 aa14.64□□□□□ -0.07
SRRT-206ENST00000460194 NCBP1Q09161 790 aaKnown RBP14.64□□□□□ -0.07
SRRT-206ENST00000460194 CD300LGQ6UXG3 332 aa14.64□□□□□ -0.07
SRRT-206ENST00000460194 GET4Q7L5D6 327 aaPredicted RBP14.64□□□□□ -0.07
SRRT-206ENST00000460194 PJA1Q8NG27 643 aa14.64□□□□□ -0.07
SRRT-206ENST00000460194 PIGOQ8TEQ8 1089 aa14.64□□□□□ -0.07
SRRT-206ENST00000460194 RMDN1Q96DB5 314 aa14.64□□□□□ -0.07
SRRT-206ENST00000460194 PRIMPOLQ96LW4 560 aa14.64□□□□□ -0.07
SRRT-206ENST00000460194 POLR3FQ9H1D9 316 aaPredicted RBP14.64□□□□□ -0.07
SRRT-206ENST00000460194 PDZD7Q9H5P4 517 aa14.64□□□□□ -0.07
SRRT-206ENST00000460194 SHISA7A6NL88 538 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 BTBD18B2RXH4 712 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 POU2F2P09086 479 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 HNRNPA1P09651 372 aaKnown RBP eCLIP14.63□□□□□ -0.07
SRRT-206ENST00000460194 XBP1P17861 261 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 FSHRP23945 695 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 CALCRLQ16602 461 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 DCLRE1AQ6PJP8 1040 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 GRASPQ7Z6J2 395 aaPredicted RBP14.63□□□□□ -0.07
SRRT-206ENST00000460194 CATSPER3Q86XQ3 398 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 C1orf210Q8IVY1 113 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 SUMF1Q8NBK3 374 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 BSNDQ8WZ55 320 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 TTPALQ9BTX7 342 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 FOXQ1Q9C009 403 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 TRIM6Q9C030 488 aaPredicted RBP14.63□□□□□ -0.07
SRRT-206ENST00000460194 CCDC113Q9H0I3 377 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 TMEM60Q9H2L4 133 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 PIDD1Q9HB75 910 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 ORC3Q9UBD5 711 aaPredicted RBP14.63□□□□□ -0.07
SRRT-206ENST00000460194 PARP2Q9UGN5 583 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 CDH7Q9ULB5 785 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 COL4A2P08572 1712 aa14.63□□□□□ -0.07
SRRT-206ENST00000460194 SF3B1O75533 1304 aaKnown RBP eCLIP14.63□□□□□ -0.078e-6■■□□□ 12.5
SRRT-206ENST00000460194 CASTOR2A6NHX0 329 aa14.62□□□□□ -0.07
SRRT-206ENST00000460194 TADA2AO75478 443 aa14.62□□□□□ -0.07
SRRT-206ENST00000460194 LARGE1O95461 756 aa14.62□□□□□ -0.07
SRRT-206ENST00000460194 KRT2P35908 639 aa14.62□□□□□ -0.07
SRRT-206ENST00000460194 RSPO2Q6UXX9 243 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms