RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	ITPR1	Q14643	2758 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	MTCL1	Q9Y4B5	1905 aa	Known RBP	9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	CHURC1-FNTB	B4DL54	471 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	NRP1	O14786	923 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	DHX15	O43143	795 aa	Known RBP	9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	TGM5	O43548	720 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	KCNK5	O95279	499 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	EFEMP2	O95967	443 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	DARS	P14868	501 aa	Known RBP	9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	FNTB	P49356	437 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	GPC3	P51654	580 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	SATB1	Q01826	763 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	GIT2	Q14161	759 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	BMS1	Q14692	1282 aa	Known RBP	9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	WDR44	Q5JSH3	913 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	ZNF484	Q5JVG2	852 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	ZBTB41	Q5SVQ8	909 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	EFCAB12	Q6NXP0	572 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	KDF1	Q8NAX2	398 aa	Predicted RBP	9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	RABGGTA	Q92696	567 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	STAM	Q92783	540 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	CUL5	Q93034	780 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	NXPE3	Q969Y0	559 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	SHD	Q96IW2	340 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	RPS6KC1	Q96S38	1066 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	ZNF302	Q9NR11	478 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	MRPL17	Q9NRX2	175 aa	Known RBP	9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	HCFC1R1	Q9NWW0	138 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	CACNG4	Q9UBN1	327 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	NFASC	O94856	1347 aa		9.8	□□□□□ -0.84
NIF3L1-206	ENST00000416651	COL1A2	P08123	1366 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	TMEM150B	A6NC51	233 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	TTLL8	A6PVC2	850 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	GAS2	O43903	313 aa	Known RBP	9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	GLUD1	P00367	558 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	POMC	P01189	267 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	RXRA	P19793	462 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	SDS	P20132	328 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	FSHR	P23945	695 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PRKCQ	Q04759	706 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	RNASEL	Q05823	741 aa	Known RBP	9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	SIM2	Q14190	667 aa	Predicted RBP	9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	SOWAHC	Q53LP3	525 aa	Predicted RBP	9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	ODR4	Q5SWX8	454 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	HEATR6	Q6AI08	1181 aa	Known RBP	9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	LILRA6	Q6PI73	481 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	CWC27	Q6UX04	472 aa	Known RBP	9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	SRBD1	Q8N5C6	995 aa	Known RBP	9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	ING5	Q8WYH8	240 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	FGF13	Q92913	245 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	RILPL2	Q969X0	211 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	CDHR1	Q96JP9	859 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	SH2D3A	Q9BRG2	576 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	MRPL9	Q9BYD2	267 aa	Known RBP	9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PSTPIP2	Q9H939	334 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	MIOS	Q9NXC5	875 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	F5	P12259	2224 aa		9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	SMG1	Q96Q15	3661 aa	Known RBP	9.79	□□□□□ -0.84
NIF3L1-206	ENST00000416651	FIGNL2	A6NMB9	653 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	TAF4	O00268	1085 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	ZNF862	O60290	1169 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PAPLN	O95428	1278 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	SOD2	P04179	222 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	ANTXR2	P58335	489 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	IL31	Q6EBC2	164 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	TCEAL6	Q6IPX3	200 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PSAPL1	Q6NUJ1	521 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	KSR1	Q8IVT5	923 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	RNF168	Q8IYW5	571 aa	Predicted RBP	9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	NANOS1	Q8WY41	292 aa	Known RBP	9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	TCEAL3	Q969E4	200 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	SDF4	Q9BRK5	362 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	HERC2P3	Q9BVR0	1158 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	OSBPL6	Q9BZF3	934 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	RXFP1	Q9HBX9	757 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	CDH7	Q9ULB5	785 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	RAB23	Q9ULC3	237 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	FAN1	Q9Y2M0	1017 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	DMXL2	Q8TDJ6	3036 aa		9.78	□□□□□ -0.84
NIF3L1-206	ENST00000416651	ASH1L	Q9NR48	2969 aa	Known RBP	9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651		A0A087WZ62	844 aa		9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	IFIT3	O14879	490 aa	Known RBP	9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	CCL16	O15467	120 aa		9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	ADAM12	O43184	909 aa		9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	UROD	P06132	367 aa		9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	RPS9	P46781	194 aa	Known RBP	9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	ADCY1	Q08828	1119 aa		9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	UGCG	Q16739	394 aa		9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	AASDH	Q4L235	1098 aa	Predicted RBP	9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	RNFT1	Q5M7Z0	435 aa		9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	STPG1	Q5TH74	334 aa		9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	ANKRD45	Q5TZF3	282 aa		9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	TWF2	Q6IBS0	349 aa	Known RBP	9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	PRSS55	Q6UWB4	352 aa	Predicted RBP	9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	VASH1	Q7L8A9	365 aa	Predicted RBP	9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	CKAP2L	Q8IYA6	745 aa		9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	CCDC82	Q8N4S0	544 aa		9.77	□□□□□ -0.85
NIF3L1-206	ENST00000416651	CELF5	Q8N6W0	485 aa	Known RBP	9.77	□□□□□ -0.85

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms