RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 YAE1P47118 141 aaPredicted RBP-2.69□□□□□ -2.84
snR53snR53 YPT32P51996 222 aaKnown RBP-2.69□□□□□ -2.84
snR53snR53 PEX31P53203 462 aa-2.69□□□□□ -2.84
snR53snR53 MAL12P53341 584 aa-2.69□□□□□ -2.84
snR53snR53 REC107P21651 314 aa-2.7□□□□□ -2.84
snR53snR53 PWP2P25635 923 aaKnown RBP-2.7□□□□□ -2.84
snR53snR53 MSK1P32048 576 aa-2.7□□□□□ -2.84
snR53snR53 IML3P38265 245 aa-2.7□□□□□ -2.84
snR53snR53 UTP9P38882 575 aaKnown RBP-2.7□□□□□ -2.84
snR53snR53 LCP5P40079 357 aaPredicted RBP-2.7□□□□□ -2.84
snR53snR53 YMR279CQ03263 540 aa-2.7□□□□□ -2.84
snR53snR53 ANT1Q06497 328 aa-2.7□□□□□ -2.84
snR53snR53 PST1Q12355 444 aa-2.7□□□□□ -2.84
snR53snR53 MEI5P32489 222 aa-2.71□□□□□ -2.84
snR53snR53 SSH1P38353 490 aaKnown RBP-2.71□□□□□ -2.84
snR53snR53 SIP3P38717 1229 aa-2.71□□□□□ -2.84
snR53snR53 CTR2P38865 189 aa-2.71□□□□□ -2.84
snR53snR53 PRP39P39682 629 aaKnown RBP-2.71□□□□□ -2.84
snR53snR53 YLR157W-EP0CF00 54 aa-2.72□□□□□ -2.84
snR53snR53 GRR1P24814 1151 aa-2.72□□□□□ -2.84
snR53snR53 YCR051WP25631 222 aa-2.72□□□□□ -2.84
snR53snR53 TEM1P38987 245 aa-2.72□□□□□ -2.84
snR53snR53 SOP4P39543 234 aaPredicted RBP-2.72□□□□□ -2.84
snR53snR53 SEN34P39707 275 aa-2.72□□□□□ -2.84
snR53snR53 PEX17P40155 199 aa-2.72□□□□□ -2.84
snR53snR53 YGR026WP53217 278 aa-2.72□□□□□ -2.84
snR53snR53 NEJ1Q06148 342 aa-2.72□□□□□ -2.84
snR53snR53 YPR078CQ06813 372 aa-2.72□□□□□ -2.84
snR53snR53 CCW12Q12127 133 aa-2.72□□□□□ -2.84
snR53snR53 CPR2P23285 205 aa-2.73□□□□□ -2.85
snR53snR53 MNE1P24720 663 aa-2.73□□□□□ -2.85
snR53snR53 SLM6P38343 150 aa-2.73□□□□□ -2.85
snR53snR53 FLX1P40464 311 aa-2.73□□□□□ -2.85
snR53snR53 YJR111CP47148 283 aaKnown RBP-2.73□□□□□ -2.85
snR53snR53 ATG16Q03818 150 aa-2.73□□□□□ -2.85
snR53snR53 IPK1Q06667 281 aa-2.73□□□□□ -2.85
snR53snR53 YDR056CQ12025 205 aa-2.73□□□□□ -2.85
snR53snR53 RPC40P07703 335 aaKnown RBP-2.74□□□□□ -2.85
snR53snR53 MSS116P15424 664 aaKnown RBP-2.74□□□□□ -2.85
snR53snR53 CKI1P20485 582 aa-2.74□□□□□ -2.85
snR53snR53 IFM1P25038 676 aa-2.74□□□□□ -2.85
snR53snR53 YCL042WP25572 119 aa-2.74□□□□□ -2.85
snR53snR53 VAB2P40003 282 aa-2.74□□□□□ -2.85
snR53snR53 ARC15P40518 154 aaRIP-Chip data-2.74□□□□□ -2.85not detected
snR53snR53 YJL028WP47062 111 aa-2.74□□□□□ -2.85
snR53snR53 ASI3P53983 676 aa-2.74□□□□□ -2.85
snR53snR53 CWC27Q02770 301 aa-2.74□□□□□ -2.85
snR53snR53 NDL1Q06568 189 aa-2.74□□□□□ -2.85
snR53snR53 MET5P47169 1442 aa-2.75□□□□□ -2.85
snR53snR53 VMA11P32842 164 aa-2.75□□□□□ -2.85
snR53snR53 YHI9P38765 294 aa-2.75□□□□□ -2.85
snR53snR53 YHR180WP38868 163 aa-2.75□□□□□ -2.85
snR53snR53 SNL1P40548 159 aa-2.75□□□□□ -2.85
snR53snR53 VPS20Q04272 221 aa-2.75□□□□□ -2.85
snR53snR53 BOP2Q06150 570 aa-2.75□□□□□ -2.85
snR53snR53 YLR446WQ06204 433 aa-2.75□□□□□ -2.85
snR53snR53 YLR012CQ07927 99 aa-2.75□□□□□ -2.85
snR53snR53 BLM10P43583 2143 aa-2.75□□□□□ -2.85
snR53snR53 SNF2P22082 1703 aa-2.76□□□□□ -2.85
snR53snR53 CKA1P15790 372 aa-2.76□□□□□ -2.85
snR53snR53 ERV1P27882 189 aa-2.76□□□□□ -2.85
snR53snR53 PEX18P38855 283 aa-2.76□□□□□ -2.85
snR53snR53 GLG2P47011 380 aa-2.76□□□□□ -2.85
snR53snR53 HSP82P02829 709 aaKnown RBP-2.77□□□□□ -2.85
snR53snR53 DAL82P21705 255 aa-2.77□□□□□ -2.85
snR53snR53 DCC1P25559 380 aa-2.77□□□□□ -2.85
snR53snR53 TOM20P35180 183 aa-2.77□□□□□ -2.85
snR53snR53 GAA1P39012 614 aa-2.77□□□□□ -2.85
snR53snR53 SHQ1P40486 507 aaPredicted RBP-2.77□□□□□ -2.85
snR53snR53 TIR3P40552 269 aa-2.77□□□□□ -2.85
snR53snR53 AIF1P52923 378 aa-2.77□□□□□ -2.85
snR53snR53 EOS1P53938 366 aa-2.77□□□□□ -2.85
snR53snR53 CTF19Q02732 369 aa-2.77□□□□□ -2.85
snR53snR53 HFA1P32874 2273 aa-2.78□□□□□ -2.85
snR53snR53 CAJ1P39101 391 aa-2.78□□□□□ -2.85
snR53snR53 YAR064WP39563 99 aa-2.78□□□□□ -2.85
snR53snR53 SLD7Q08457 257 aa-2.78□□□□□ -2.85
snR53snR53 YPR1Q12458 312 aa-2.78□□□□□ -2.85
snR53snR53 YHR213W-BQ8TGK1 99 aa-2.78□□□□□ -2.85
snR53snR53 YDR157WA0A023PZE8 133 aa-2.79□□□□□ -2.86
snR53snR53 RPL9AP05738 191 aaKnown RBP-2.79□□□□□ -2.86
snR53snR53 RPL43AP0CX25 92 aaKnown RBP-2.79□□□□□ -2.86
snR53snR53 RPL43BP0CX26 92 aa-2.79□□□□□ -2.86
snR53snR53 ADK2P26364 225 aa-2.79□□□□□ -2.86
snR53snR53 RCN1P36054 211 aa-2.79□□□□□ -2.86
snR53snR53 YHR125WP38831 101 aa-2.79□□□□□ -2.86
snR53snR53 AGX1P43567 385 aa-2.79□□□□□ -2.86
snR53snR53 RPL9BP51401 191 aaKnown RBP-2.79□□□□□ -2.86
snR53snR53 YLR460CP54007 376 aa-2.79□□□□□ -2.86
snR53snR53 YKR005CQ02203 525 aa-2.79□□□□□ -2.86
snR53snR53 IRC4Q03036 179 aa-2.79□□□□□ -2.86
snR53snR53 AIM45Q12480 344 aaKnown RBP-2.79□□□□□ -2.86
snR53snR53 MSW1P04803 379 aa-2.8□□□□□ -2.86
snR53snR53 CDC36P06100 191 aaPredicted RBP-2.8□□□□□ -2.86
snR53snR53 PTC1P35182 281 aa-2.8□□□□□ -2.86
snR53snR53 YNL217WP40152 326 aa-2.8□□□□□ -2.86
snR53snR53 RPL33BP41056 107 aaKnown RBP-2.8□□□□□ -2.86
snR53snR53 ERJ5P43613 295 aaPredicted RBP-2.8□□□□□ -2.86
snR53snR53 BOL2P53082 120 aa-2.8□□□□□ -2.86
snR53snR53 SAY1P53324 424 aa-2.8□□□□□ -2.86
Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms