RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 TVP38P36164 337 aa-0.61□□□□□ -2.51
snR50snR50 YBL028CP38202 106 aa-0.61□□□□□ -2.51
snR50snR50 SPP381P38282 291 aaPredicted RBP-0.61□□□□□ -2.51
snR50snR50 PHO89P38361 574 aa-0.61□□□□□ -2.51
snR50snR50 RCY1P39531 840 aa-0.61□□□□□ -2.51
snR50snR50 EDC3P39998 551 aaKnown RBP-0.61□□□□□ -2.51
snR50snR50 PEX17P40155 199 aa-0.61□□□□□ -2.51
snR50snR50 MDM34P53083 459 aa-0.61□□□□□ -2.51
snR50snR50 AIM33Q04516 312 aa-0.61□□□□□ -2.51
snR50snR50 AIM45Q12480 344 aaKnown RBP-0.61□□□□□ -2.51
snR50snR50 ERD1P16151 362 aa-0.62□□□□□ -2.51
snR50snR50 RBK1P25332 333 aa-0.62□□□□□ -2.51
snR50snR50 ERV1P27882 189 aa-0.62□□□□□ -2.51
snR50snR50 PSO2P30620 661 aa-0.62□□□□□ -2.51
snR50snR50 LTV1P34078 463 aa-0.62□□□□□ -2.51
snR50snR50 POP8P38208 133 aa-0.62□□□□□ -2.51
snR50snR50 YPC1P38298 316 aa-0.62□□□□□ -2.51
snR50snR50 YHL042WP38729 150 aa-0.62□□□□□ -2.51
snR50snR50 MLH1P38920 769 aa-0.62□□□□□ -2.51
snR50snR50 YMR134WP40207 237 aa-0.62□□□□□ -2.51
snR50snR50 YIL089WP40500 205 aa-0.62□□□□□ -2.51
snR50snR50 AGX1P43567 385 aa-0.62□□□□□ -2.51
snR50snR50 YAE1P47118 141 aaPredicted RBP-0.62□□□□□ -2.51
snR50snR50 YGR026WP53217 278 aa-0.62□□□□□ -2.51
snR50snR50 CTF19Q02732 369 aa-0.62□□□□□ -2.51
snR50snR50 IRC4Q03036 179 aa-0.62□□□□□ -2.51
snR50snR50 YMR279CQ03263 540 aa-0.62□□□□□ -2.51
snR50snR50 ANT1Q06497 328 aa-0.62□□□□□ -2.51
snR50snR50 PET9P18239 318 aaKnown RBP-0.63□□□□□ -2.51
snR50snR50 ADK2P26364 225 aa-0.63□□□□□ -2.51
snR50snR50 ACB1P31787 87 aa-0.63□□□□□ -2.51
snR50snR50 AEP1P32493 518 aa-0.63□□□□□ -2.51
snR50snR50 VPH1P32563 840 aaKnown RBP-0.63□□□□□ -2.51
snR50snR50 FUI1P38196 639 aa-0.63□□□□□ -2.51
snR50snR50 YBR062CP38239 180 aa-0.63□□□□□ -2.51
snR50snR50 IML3P38265 245 aa-0.63□□□□□ -2.51
snR50snR50 TPM2P40414 161 aa-0.63□□□□□ -2.51
snR50snR50 JHD2P47156 728 aaPredicted RBP-0.63□□□□□ -2.51
snR50snR50 TCB2P48231 1178 aa-0.63□□□□□ -2.51
snR50snR50 CUE3P53137 624 aaKnown RBP-0.63□□□□□ -2.51
snR50snR50 PEX31P53203 462 aa-0.63□□□□□ -2.51
snR50snR50 YGR111WP53265 400 aa-0.63□□□□□ -2.51
snR50snR50 CUS2P53830 285 aaPredicted RBP-0.63□□□□□ -2.51
snR50snR50 DIG2Q03373 323 aaKnown RBP-0.63□□□□□ -2.51
snR50snR50 NEJ1Q06148 342 aa-0.63□□□□□ -2.51
snR50snR50 TAZ1Q06510 381 aa-0.63□□□□□ -2.51
snR50snR50 YLR030WQ07967 263 aa-0.63□□□□□ -2.51
snR50snR50 PEX27Q08580 376 aa-0.63□□□□□ -2.51
snR50snR50 YDL180WQ12301 547 aa-0.63□□□□□ -2.51
snR50snR50 CYR1P08678 2026 aaKnown RBP-0.64□□□□□ -2.51
snR50snR50 COT1P32798 439 aa-0.64□□□□□ -2.51
snR50snR50 IMP3P32899 183 aaPredicted RBP-0.64□□□□□ -2.51
snR50snR50 PXA2P34230 853 aa-0.64□□□□□ -2.51
snR50snR50 MCH2P36032 473 aa-0.64□□□□□ -2.51
snR50snR50 SSH1P38353 490 aaKnown RBP-0.64□□□□□ -2.51
snR50snR50 CTR2P38865 189 aa-0.64□□□□□ -2.51
snR50snR50 FLX1P40464 311 aa-0.64□□□□□ -2.51
snR50snR50 AVT7P40501 490 aa-0.64□□□□□ -2.51
snR50snR50 ARC15P40518 154 aaRIP-Chip data-0.64□□□□□ -2.51not detected
snR50snR50 SNL1P40548 159 aa-0.64□□□□□ -2.51
snR50snR50 GDS1P41913 522 aa-0.64□□□□□ -2.51
snR50snR50 YFL040WP43562 540 aa-0.64□□□□□ -2.51
snR50snR50 YHC3P47040 408 aa-0.64□□□□□ -2.51
snR50snR50 TAF6P53040 516 aa-0.64□□□□□ -2.51
snR50snR50 OKP1P53298 406 aa-0.64□□□□□ -2.51
snR50snR50 TAF11Q04226 346 aa-0.64□□□□□ -2.51
snR50snR50 MED1Q12321 566 aa-0.64□□□□□ -2.51
snR50snR50 HSP82P02829 709 aaKnown RBP-0.65□□□□□ -2.51
snR50snR50 COS2P0CX12 379 aa-0.65□□□□□ -2.51
snR50snR50 COS3P0CX13 379 aa-0.65□□□□□ -2.51
snR50snR50 UGA1P17649 471 aa-0.65□□□□□ -2.51
snR50snR50 RPC53P25441 422 aa-0.65□□□□□ -2.51
snR50snR50 SRY1P36007 326 aa-0.65□□□□□ -2.51
snR50snR50 HMT1P38074 348 aa-0.65□□□□□ -2.51
snR50snR50 ECM13P38195 257 aa-0.65□□□□□ -2.51
snR50snR50 YHR122WP38829 231 aa-0.65□□□□□ -2.51
snR50snR50 PEX18P38855 283 aa-0.65□□□□□ -2.51
snR50snR50 VPS45P38932 577 aa-0.65□□□□□ -2.51
snR50snR50 YGR016WP53209 190 aa-0.65□□□□□ -2.51
snR50snR50 CWC27Q02770 301 aa-0.65□□□□□ -2.51
snR50snR50 RCE1Q03530 315 aa-0.65□□□□□ -2.51
snR50snR50 PST1Q12355 444 aa-0.65□□□□□ -2.51
snR50snR50 YPR1Q12458 312 aa-0.65□□□□□ -2.51
snR50snR50 RPL9AP05738 191 aaKnown RBP-0.66□□□□□ -2.52
snR50snR50 YHR032W-AP0C5N6 59 aa-0.66□□□□□ -2.52
snR50snR50 MNE1P24720 663 aa-0.66□□□□□ -2.52
snR50snR50 MAL32P38158 584 aa-0.66□□□□□ -2.52
snR50snR50 SIP3P38717 1229 aa-0.66□□□□□ -2.52
snR50snR50 COS8P38723 381 aa-0.66□□□□□ -2.52
snR50snR50 YHR035WP38769 630 aa-0.66□□□□□ -2.52
snR50snR50 YHR180WP38868 163 aa-0.66□□□□□ -2.52
snR50snR50 SEN34P39707 275 aa-0.66□□□□□ -2.52
snR50snR50 LSM5P40089 93 aaKnown RBP-0.66□□□□□ -2.52
snR50snR50 YJL028WP47062 111 aa-0.66□□□□□ -2.52
snR50snR50 MPP10P47083 593 aaKnown RBP-0.66□□□□□ -2.52
snR50snR50 RPL9BP51401 191 aaKnown RBP-0.66□□□□□ -2.52
snR50snR50 UBC13P52490 153 aa-0.66□□□□□ -2.52
snR50snR50 MGA1P53050 456 aa-0.66□□□□□ -2.52
snR50snR50 ARO8P53090 500 aaKnown RBP-0.66□□□□□ -2.52
snR50snR50 PXR1P53335 271 aaPredicted RBP-0.66□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms