RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 EBP2P36049 427 aaKnown RBP-1.55□□□□□ -2.66
snR47snR47 UIP5P36137 443 aa-1.55□□□□□ -2.66
snR47snR47 FUI1P38196 639 aa-1.55□□□□□ -2.66
snR47snR47 POP8P38208 133 aa-1.55□□□□□ -2.66
snR47snR47 TEM1P38987 245 aa-1.55□□□□□ -2.66
snR47snR47 EDC3P39998 551 aaKnown RBP-1.55□□□□□ -2.66
snR47snR47 VAB2P40003 282 aa-1.55□□□□□ -2.66
snR47snR47 PEX31P53203 462 aa-1.55□□□□□ -2.66
snR47snR47 YLR446WQ06204 433 aa-1.55□□□□□ -2.66
snR47snR47 TAZ1Q06510 381 aa-1.55□□□□□ -2.66
snR47snR47 UAF30Q08747 228 aa-1.55□□□□□ -2.66
snR47snR47 YHR032W-AP0C5N6 59 aa-1.56□□□□□ -2.66
snR47snR47 PET9P18239 318 aaKnown RBP-1.56□□□□□ -2.66
snR47snR47 RPC53P25441 422 aa-1.56□□□□□ -2.66
snR47snR47 URA7P28274 579 aaKnown RBP-1.56□□□□□ -2.66
snR47snR47 YHL042WP38729 150 aa-1.56□□□□□ -2.66
snR47snR47 IRC6P43615 237 aa-1.56□□□□□ -2.66
snR47snR47 AIM45Q12480 344 aaKnown RBP-1.56□□□□□ -2.66
snR47snR47 PGA3Q12746 312 aaKnown RBP-1.56□□□□□ -2.66
snR47snR47 PDE2P06776 526 aa-1.57□□□□□ -2.66
snR47snR47 CKI1P20485 582 aa-1.57□□□□□ -2.66
snR47snR47 COT1P32798 439 aa-1.57□□□□□ -2.66
snR47snR47 PEX32P38292 413 aa-1.57□□□□□ -2.66
snR47snR47 PEX17P40155 199 aa-1.57□□□□□ -2.66
snR47snR47 JHD2P47156 728 aaPredicted RBP-1.57□□□□□ -2.66
snR47snR47 ANT1Q06497 328 aa-1.57□□□□□ -2.66
snR47snR47 ERD1P16151 362 aa-1.58□□□□□ -2.66
snR47snR47 ERV1P27882 189 aa-1.58□□□□□ -2.66
snR47snR47 MEI5P32489 222 aa-1.58□□□□□ -2.66
snR47snR47 SSH1P38353 490 aaKnown RBP-1.58□□□□□ -2.66
snR47snR47 AVT7P40501 490 aa-1.58□□□□□ -2.66
snR47snR47 GDS1P41913 522 aa-1.58□□□□□ -2.66
snR47snR47 YGR026WP53217 278 aa-1.58□□□□□ -2.66
snR47snR47 IRC4Q03036 179 aa-1.58□□□□□ -2.66
snR47snR47 VPS20Q04272 221 aa-1.58□□□□□ -2.66
snR47snR47 NEJ1Q06148 342 aa-1.58□□□□□ -2.66
snR47snR47 SRN2Q99176 213 aa-1.58□□□□□ -2.66
snR47snR47 PWP2P25635 923 aaKnown RBP-1.59□□□□□ -2.66
snR47snR47 VPS24P36095 224 aaKnown RBP-1.59□□□□□ -2.66
snR47snR47 IML3P38265 245 aa-1.59□□□□□ -2.66
snR47snR47 FLX1P40464 311 aa-1.59□□□□□ -2.66
snR47snR47 YIL089WP40500 205 aa-1.59□□□□□ -2.66
snR47snR47 AGX1P43567 385 aa-1.59□□□□□ -2.66
snR47snR47 COS2P0CX12 379 aa-1.6□□□□□ -2.67
snR47snR47 COS3P0CX13 379 aa-1.6□□□□□ -2.67
snR47snR47 ARC15P40518 154 aaRIP-Chip data-1.6□□□□□ -2.67not detected
snR47snR47 ARO8P53090 500 aaKnown RBP-1.6□□□□□ -2.67
snR47snR47 CUS2P53830 285 aaPredicted RBP-1.6□□□□□ -2.67
snR47snR47 CTF19Q02732 369 aa-1.6□□□□□ -2.67
snR47snR47 CWC27Q02770 301 aa-1.6□□□□□ -2.67
snR47snR47 ADH6Q04894 360 aaKnown RBP-1.6□□□□□ -2.67
snR47snR47 YDL180WQ12301 547 aa-1.6□□□□□ -2.67
snR47snR47 HSP82P02829 709 aaKnown RBP-1.61□□□□□ -2.67
snR47snR47 PXA2P34230 853 aa-1.61□□□□□ -2.67
snR47snR47 SIP3P38717 1229 aa-1.61□□□□□ -2.67
snR47snR47 PEX18P38855 283 aa-1.61□□□□□ -2.67
snR47snR47 YHR180WP38868 163 aa-1.61□□□□□ -2.67
snR47snR47 MLH1P38920 769 aa-1.61□□□□□ -2.67
snR47snR47 SEN34P39707 275 aa-1.61□□□□□ -2.67
snR47snR47 YIL102CP40488 101 aa-1.61□□□□□ -2.67
snR47snR47 TCB2P48231 1178 aa-1.61□□□□□ -2.67
snR47snR47 RCE1Q03530 315 aa-1.61□□□□□ -2.67
snR47snR47 GAL3P13045 520 aa-1.62□□□□□ -2.67
snR47snR47 AEP1P32493 518 aa-1.62□□□□□ -2.67
snR47snR47 IMP3P32899 183 aaPredicted RBP-1.62□□□□□ -2.67
snR47snR47 HMT1P38074 348 aa-1.62□□□□□ -2.67
snR47snR47 MAL32P38158 584 aa-1.62□□□□□ -2.67
snR47snR47 ECM13P38195 257 aa-1.62□□□□□ -2.67
snR47snR47 YFL040WP43562 540 aa-1.62□□□□□ -2.67
snR47snR47 YJL028WP47062 111 aa-1.62□□□□□ -2.67
snR47snR47 YJR111CP47148 283 aaKnown RBP-1.62□□□□□ -2.67
snR47snR47 MAL12P53341 584 aa-1.62□□□□□ -2.67
snR47snR47 YNR068CP53754 272 aa-1.62□□□□□ -2.67
snR47snR47 YMR279CQ03263 540 aa-1.62□□□□□ -2.67
snR47snR47 CCW12Q12127 133 aa-1.62□□□□□ -2.67
snR47snR47 COX5AP00424 153 aa-1.63□□□□□ -2.67
snR47snR47 VPH1P32563 840 aaKnown RBP-1.63□□□□□ -2.67
snR47snR47 MCH2P36032 473 aa-1.63□□□□□ -2.67
snR47snR47 YMR134WP40207 237 aa-1.63□□□□□ -2.67
snR47snR47 SNL1P40548 159 aa-1.63□□□□□ -2.67
snR47snR47 GLG2P47011 380 aa-1.63□□□□□ -2.67
snR47snR47 YHC3P47040 408 aa-1.63□□□□□ -2.67
snR47snR47 YGR111WP53265 400 aa-1.63□□□□□ -2.67
snR47snR47 BOP2Q06150 570 aa-1.63□□□□□ -2.67
snR47snR47 PEX27Q08580 376 aa-1.63□□□□□ -2.67
snR47snR47 PST1Q12355 444 aa-1.63□□□□□ -2.67
snR47snR47 RBK1P25332 333 aa-1.64□□□□□ -2.67
snR47snR47 GAA1P39012 614 aa-1.64□□□□□ -2.67
snR47snR47 TIR3P40552 269 aa-1.64□□□□□ -2.67
snR47snR47 SNX41Q04053 625 aa-1.64□□□□□ -2.67
snR47snR47 ARR2Q06597 130 aa-1.64□□□□□ -2.67
snR47snR47 MNE1P24720 663 aa-1.65□□□□□ -2.67
snR47snR47 YHR125WP38831 101 aa-1.65□□□□□ -2.67
snR47snR47 AIF1P52923 378 aa-1.65□□□□□ -2.67
snR47snR47 TAF6P53040 516 aa-1.65□□□□□ -2.67
snR47snR47 BOL2P53082 120 aa-1.65□□□□□ -2.67
snR47snR47 FMP41P53889 259 aaKnown RBP-1.65□□□□□ -2.67
snR47snR47 YLR307C-AQ3E825 87 aa-1.65□□□□□ -2.67
snR47snR47 RPL9AP05738 191 aaKnown RBP-1.66□□□□□ -2.68
snR47snR47 RPC40P07703 335 aaKnown RBP-1.66□□□□□ -2.68
Retrieved 100 of 5,963 RNA–protein pairs in 116.3 ms