RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C CCT4P39078 528 aaKnown RBP1.65□□□□□ -2.14
ATG11YPR049C GAB1P41733 394 aa1.65□□□□□ -2.14
ATG11YPR049C DPB11P47027 764 aaPredicted RBP1.65□□□□□ -2.14
ATG11YPR049C UFD1P53044 361 aa1.65□□□□□ -2.14
ATG11YPR049C IRC19Q07843 230 aa1.65□□□□□ -2.14
ATG11YPR049C MIG1P27705 504 aa1.65□□□□□ -2.15
ATG11YPR049C YPT53P36019 220 aa1.65□□□□□ -2.15
ATG11YPR049C RPL32P38061 130 aaKnown RBP1.65□□□□□ -2.15
ATG11YPR049C BFR1P38934 470 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
ATG11YPR049C CAJ1P39101 391 aa1.65□□□□□ -2.15
ATG11YPR049C YNL140CP53910 189 aa1.65□□□□□ -2.15
ATG11YPR049C HMO1Q03973 246 aaKnown RBP1.65□□□□□ -2.15
ATG11YPR049C GTB1Q04924 702 aa1.65□□□□□ -2.15
ATG11YPR049C UIP4Q08926 304 aa1.65□□□□□ -2.15
ATG11YPR049C ARG3P05150 338 aa1.65□□□□□ -2.15
ATG11YPR049C RPL3P14126 387 aaKnown RBP1.65□□□□□ -2.15
ATG11YPR049C ACH1P32316 526 aa1.65□□□□□ -2.15
ATG11YPR049C ARC1P46672 376 aaKnown RBP1.65□□□□□ -2.15
ATG11YPR049C GPI8P49018 411 aa1.65□□□□□ -2.15
ATG11YPR049C YMR155WQ03795 547 aa1.65□□□□□ -2.15
ATG11YPR049C UAF30Q08747 228 aa1.65□□□□□ -2.15
ATG11YPR049C FIT3Q08907 204 aa1.65□□□□□ -2.15
ATG11YPR049C RKM1Q08961 583 aaPredicted RBP1.65□□□□□ -2.15
ATG11YPR049C YBR255C-AQ3E776 120 aa1.65□□□□□ -2.15
ATG11YPR049C CDC31P06704 161 aaKnown RBP1.64□□□□□ -2.15
ATG11YPR049C RHO2P06781 192 aa1.64□□□□□ -2.15
ATG11YPR049C YBR138CP38277 524 aa1.64□□□□□ -2.15
ATG11YPR049C RCY1P39531 840 aa1.64□□□□□ -2.15
ATG11YPR049C YFR035CP43608 114 aa1.64□□□□□ -2.15
ATG11YPR049C XPT1P47165 209 aa1.64□□□□□ -2.15
ATG11YPR049C IMA1P53051 589 aa1.64□□□□□ -2.15
ATG11YPR049C RMD9P53140 646 aaKnown RBP1.64□□□□□ -2.15
ATG11YPR049C APJ1P53940 528 aa1.64□□□□□ -2.15
ATG11YPR049C CTL1Q03220 320 aaKnown RBP1.64□□□□□ -2.15
ATG11YPR049C VTI1Q04338 217 aa1.64□□□□□ -2.15
ATG11YPR049C GGA1Q06336 557 aa1.64□□□□□ -2.15
ATG11YPR049C SYO1Q07395 620 aa1.64□□□□□ -2.15
ATG11YPR049C STF1P01098 86 aa1.64□□□□□ -2.15
ATG11YPR049C CLB3P24870 427 aa1.64□□□□□ -2.15
ATG11YPR049C RPL5P26321 297 aaKnown RBP1.64□□□□□ -2.15
ATG11YPR049C COX13P32799 129 aa1.64□□□□□ -2.15
ATG11YPR049C PTC1P35182 281 aa1.64□□□□□ -2.15
ATG11YPR049C ECM31P38122 312 aa1.64□□□□□ -2.15
ATG11YPR049C GDI1P39958 451 aaKnown RBP1.64□□□□□ -2.15
ATG11YPR049C OST1P41543 476 aaKnown RBP1.64□□□□□ -2.15
ATG11YPR049C MIC19P43594 170 aa1.64□□□□□ -2.15
ATG11YPR049C YLR281CQ05863 155 aa1.64□□□□□ -2.15
ATG11YPR049C STE23Q06010 1027 aa1.64□□□□□ -2.15
ATG11YPR049C CTS2Q06350 511 aa1.64□□□□□ -2.15
ATG11YPR049C APC2Q12440 853 aa1.64□□□□□ -2.15
ATG11YPR049C SRN2Q99176 213 aa1.64□□□□□ -2.15
ATG11YPR049C CPR1P14832 162 aaKnown RBP1.63□□□□□ -2.15
ATG11YPR049C MER1P16523 270 aa1.63□□□□□ -2.15
ATG11YPR049C RPS1BP23248 255 aaKnown RBP1.63□□□□□ -2.15
ATG11YPR049C MGT1P26188 188 aa1.63□□□□□ -2.15
ATG11YPR049C YKL071WP36086 256 aa1.63□□□□□ -2.15
ATG11YPR049C ARN1P38731 627 aa1.63□□□□□ -2.15
ATG11YPR049C RBG1P39729 369 aa1.63□□□□□ -2.15
ATG11YPR049C IAH1P41734 238 aa1.63□□□□□ -2.15
ATG11YPR049C CGR1P53188 120 aa1.63□□□□□ -2.15
ATG11YPR049C MAL13P53338 473 aa1.63□□□□□ -2.15
ATG11YPR049C DSL1P53847 754 aa1.63□□□□□ -2.15
ATG11YPR049C REX2P54964 269 aaKnown RBP1.63□□□□□ -2.15
ATG11YPR049C YDC1Q02896 317 aa1.63□□□□□ -2.15
ATG11YPR049C SML1Q04964 104 aa1.63□□□□□ -2.15
ATG11YPR049C BRX1Q08235 291 aaKnown RBP1.63□□□□□ -2.15
ATG11YPR049C PUP2P32379 260 aa1.63□□□□□ -2.15
ATG11YPR049C SSO1P32867 290 aa1.63□□□□□ -2.15
ATG11YPR049C FLO10P36170 1169 aa1.63□□□□□ -2.15
ATG11YPR049C ECM8P38246 354 aa1.63□□□□□ -2.15
ATG11YPR049C IMD2P38697 523 aaKnown RBP1.63□□□□□ -2.15
ATG11YPR049C VPS41P38959 992 aa1.63□□□□□ -2.15
ATG11YPR049C IMD3P50095 523 aaKnown RBP1.63□□□□□ -2.15
ATG11YPR049C AIF1P52923 378 aa1.63□□□□□ -2.15
ATG11YPR049C EFM5P53200 248 aaKnown RBP1.63□□□□□ -2.15
ATG11YPR049C GIM3P53900 129 aa1.63□□□□□ -2.15
ATG11YPR049C MRX4Q12467 430 aa1.63□□□□□ -2.15
ATG11YPR049C YHR214C-EQ8TGK0 99 aa1.63□□□□□ -2.15
ATG11YPR049C YAL064W-BO13512 126 aa1.63□□□□□ -2.15
ATG11YPR049C KRR1P25586 316 aaPredicted RBP1.63□□□□□ -2.15
ATG11YPR049C NTG1P31378 399 aa1.63□□□□□ -2.15
ATG11YPR049C RPN2P32565 945 aaKnown RBP1.63□□□□□ -2.15
ATG11YPR049C COS9P36034 407 aa1.63□□□□□ -2.15
ATG11YPR049C SWD2P36104 329 aaPredicted RBP1.63□□□□□ -2.15
ATG11YPR049C AIM2P39721 246 aa1.63□□□□□ -2.15
ATG11YPR049C ISC1P40015 477 aaKnown RBP1.63□□□□□ -2.15
ATG11YPR049C RRP17Q04031 235 aaPredicted RBP1.63□□□□□ -2.15
ATG11YPR049C YET3Q07451 203 aa1.63□□□□□ -2.15
ATG11YPR049C FRE3Q08905 711 aa1.63□□□□□ -2.15
ATG11YPR049C FRE8Q12209 686 aa1.63□□□□□ -2.15
ATG11YPR049C DEG1P31115 442 aaKnown RBP1.62□□□□□ -2.15
ATG11YPR049C DEP1P31385 405 aa1.62□□□□□ -2.15
ATG11YPR049C SAC1P32368 623 aaKnown RBP1.62□□□□□ -2.15
ATG11YPR049C YBR144CP34215 104 aa1.62□□□□□ -2.15
ATG11YPR049C ARC40P38328 384 aaKnown RBP1.62□□□□□ -2.15
ATG11YPR049C YHR218WP38899 603 aa1.62□□□□□ -2.15
ATG11YPR049C PAC10P48363 199 aa1.62□□□□□ -2.15
ATG11YPR049C COX20Q04935 205 aa1.62□□□□□ -2.15
ATG11YPR049C ATG38Q05789 226 aaKnown RBP1.62□□□□□ -2.15
ATG11YPR049C SEC10Q06245 871 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms