RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDH1	YPR002W	SUI1	P32911	108 aa	Known RBP	4.95	□□□□□ -1.62
PDH1	YPR002W	YKL162C	P36052	402 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	MRPL36	P36531	177 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	TRM7	P38238	310 aa	Known RBP	4.95	□□□□□ -1.62
PDH1	YPR002W	SDS24	P38314	527 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	TAE1	P38340	232 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	RPP1	P38786	293 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	IKI1	P38874	309 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	YIL060W	P40519	144 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	UBX6	P47049	396 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	YJR111C	P47148	283 aa	Known RBP	4.95	□□□□□ -1.62
PDH1	YPR002W	PHO23	P50947	330 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	YGR026W	P53217	278 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	SNO2	P53823	222 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	REC102	Q02721	264 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	LEE1	Q02799	301 aa	Known RBP	4.95	□□□□□ -1.62
PDH1	YPR002W	RBS1	Q05672	457 aa	Known RBP	4.95	□□□□□ -1.62
PDH1	YPR002W	YOR352W	Q08816	343 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
PDH1	YPR002W	PCC1	Q3E833	88 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	HOM3	P10869	527 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	FUR1	P18562	216 aa	Known RBP	4.95	□□□□□ -1.62
PDH1	YPR002W	FPR1	P20081	114 aa	Known RBP	4.95	□□□□□ -1.62
PDH1	YPR002W	RFA1	P22336	621 aa	Known RBP	4.95	□□□□□ -1.62
PDH1	YPR002W	RNQ1	P25367	405 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	DED81	P38707	554 aa	Known RBP	4.95	□□□□□ -1.62
PDH1	YPR002W	ARO9	P38840	513 aa	Predicted RBP	4.95	□□□□□ -1.62
PDH1	YPR002W	SMB1	P40018	196 aa	Known RBP	4.95	□□□□□ -1.62
PDH1	YPR002W	YEH1	Q07804	573 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	DGK1	Q12382	290 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	ISN1	Q99312	450 aa		4.95	□□□□□ -1.62
PDH1	YPR002W	TIM12	P32830	109 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	PTR2	P32901	601 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	VAM7	P32912	316 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	SPC29	P33419	253 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	YOR062C	P36025	268 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	MRPL27	P36526	146 aa	Predicted RBP	4.94	□□□□□ -1.62
PDH1	YPR002W	YPC1	P38298	316 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	ANS1	P38832	159 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	ASP1	P38986	381 aa	Predicted RBP	4.94	□□□□□ -1.62
PDH1	YPR002W	FMP10	P40098	244 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	SMK1	P41808	388 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	OTU1	P43558	301 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	PHB2	P50085	310 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	NRK1	P53915	240 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	ERV25	P54837	211 aa	Known RBP	4.94	□□□□□ -1.62
PDH1	YPR002W	BUD25	P85052	153 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	MTQ2	Q03920	221 aa	Predicted RBP	4.94	□□□□□ -1.62
PDH1	YPR002W	BRX1	Q08235	291 aa	Known RBP	4.94	□□□□□ -1.62
PDH1	YPR002W	YOR365C	Q08844	703 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	FMP40	Q08968	688 aa	Predicted RBP	4.94	□□□□□ -1.62
PDH1	YPR002W	MMT2	Q08970	484 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	TFC7	Q12415	435 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	RRI1	Q12468	440 aa		4.94	□□□□□ -1.62
PDH1	YPR002W	LSO2	Q3E772	92 aa	Known RBP	4.94	□□□□□ -1.62
PDH1	YPR002W	MDM35	O60200	86 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	TDH2	P00358	332 aa	Known RBP	4.93	□□□□□ -1.62
PDH1	YPR002W	CWH43	P25618	953 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	ECM25	P32525	599 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	YIL166C	P40445	542 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	SYS1	P41544	203 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	MRX5	P47007	382 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	SFH5	P47008	294 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	YHC3	P47040	408 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	MCM22	P47167	239 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	YGR012W	P53206	393 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	YGR042W	P53227	271 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	FHN1	P53279	174 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	OKP1	P53298	406 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	SMX3	P54999	86 aa	Predicted RBP	4.93	□□□□□ -1.62
PDH1	YPR002W	EST3	Q03096	181 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	YML096W	Q04489	525 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	VBA4	Q04602	768 aa	Known RBP	4.93	□□□□□ -1.62
PDH1	YPR002W	SNO4	Q04902	237 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	AIM6	Q07716	390 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	SDO1	Q07953	250 aa	Known RBP	4.93	□□□□□ -1.62
PDH1	YPR002W	HSP33	Q08914	237 aa	Known RBP	4.93	□□□□□ -1.62
PDH1	YPR002W	HSP32	Q08992	237 aa		4.93	□□□□□ -1.62
PDH1	YPR002W	HIP1	P06775	603 aa		4.92	□□□□□ -1.62
PDH1	YPR002W	YPK2	P18961	677 aa		4.92	□□□□□ -1.62
PDH1	YPR002W	SCL1	P21243	252 aa	Known RBP	4.92	□□□□□ -1.62
PDH1	YPR002W	URK1	P27515	501 aa		4.92	□□□□□ -1.62
PDH1	YPR002W	TRR1	P29509	319 aa	Known RBP	4.92	□□□□□ -1.62
PDH1	YPR002W	PRE2	P30656	287 aa	Known RBP	4.92	□□□□□ -1.62
PDH1	YPR002W	MCM10	P32354	571 aa		4.92	□□□□□ -1.62
PDH1	YPR002W	RPD3	P32561	433 aa		4.92	□□□□□ -1.62
PDH1	YPR002W	AUR1	P36107	401 aa	Predicted RBP	4.92	□□□□□ -1.62
PDH1	YPR002W	ATP3	P38077	311 aa	Known RBP	4.92	□□□□□ -1.62
PDH1	YPR002W	PRS3	P38689	320 aa	Known RBP	4.92	□□□□□ -1.62
PDH1	YPR002W	OSW5	P40219	148 aa		4.92	□□□□□ -1.62
PDH1	YPR002W	GTT1	P40582	234 aa		4.92	□□□□□ -1.62
PDH1	YPR002W	ALK1	P43633	760 aa	Known RBP	4.92	□□□□□ -1.62
PDH1	YPR002W	CCC1	P47818	322 aa		4.92	□□□□□ -1.62
PDH1	YPR002W	YNR062C	P53748	327 aa		4.92	□□□□□ -1.62
PDH1	YPR002W	MRPL22	P53881	309 aa		4.92	□□□□□ -1.62
PDH1	YPR002W	TDA7	P53882	636 aa	Predicted RBP	4.92	□□□□□ -1.62
PDH1	YPR002W	FMP41	P53889	259 aa	Known RBP	4.92	□□□□□ -1.62
PDH1	YPR002W	YPR091C	Q06833	770 aa		4.92	□□□□□ -1.62
PDH1	YPR002W	ORT1	Q12375	292 aa		4.92	□□□□□ -1.62
PDH1	YPR002W	GAL4	P04386	881 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms