RNA–Protein interactions for RNA: YPL111W

CAR1, Transcript of Arginase, catabolizes arginine to ornithine and urea, yeast

Gene CAR1, Length 1,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAR1	YPL111W	NUP116	Q02630	1113 aa		4.85	□□□□□ -1.63
CAR1	YPL111W	TVP15	Q03860	143 aa		4.85	□□□□□ -1.63
CAR1	YPL111W	POS5	Q06892	414 aa		4.85	□□□□□ -1.63
CAR1	YPL111W	RSA1	Q08932	381 aa		4.85	□□□□□ -1.63
CAR1	YPL111W	BSC1	Q12140	328 aa		4.85	□□□□□ -1.63
CAR1	YPL111W	DYN1	P36022	4092 aa		4.85	□□□□□ -1.63
CAR1	YPL111W	ADE5,7	P07244	802 aa	Known RBP	4.84	□□□□□ -1.63
CAR1	YPL111W	MRP2	P10663	115 aa	Predicted RBP	4.84	□□□□□ -1.63
CAR1	YPL111W	AIM17	P23180	465 aa	Known RBP	4.84	□□□□□ -1.63
CAR1	YPL111W	ACP1	P32463	125 aa		4.84	□□□□□ -1.63
CAR1	YPL111W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
CAR1	YPL111W	YHR177W	P38867	453 aa		4.84	□□□□□ -1.63
CAR1	YPL111W	ALP1	P38971	573 aa		4.84	□□□□□ -1.63
CAR1	YPL111W	CIN4	P39110	191 aa		4.84	□□□□□ -1.63
CAR1	YPL111W	AYR1	P40471	297 aa		4.84	□□□□□ -1.63
CAR1	YPL111W	LYS12	P40495	371 aa	Known RBP	4.84	□□□□□ -1.63
CAR1	YPL111W	REE1	P40893	198 aa		4.84	□□□□□ -1.63
CAR1	YPL111W	SWP1	Q02795	286 aa		4.84	□□□□□ -1.63
CAR1	YPL111W	API2	Q04413	109 aa		4.84	□□□□□ -1.63
CAR1	YPL111W	BUR2	Q05949	395 aa		4.84	□□□□□ -1.63
CAR1	YPL111W	MRPL35	Q06678	367 aa		4.84	□□□□□ -1.63
CAR1	YPL111W	HNT3	Q08702	217 aa		4.84	□□□□□ -1.63
CAR1	YPL111W	Q0297	Q9ZZV8	51 aa		4.84	□□□□□ -1.63
CAR1	YPL111W	HEM4	P06174	275 aa		4.83	□□□□□ -1.64
CAR1	YPL111W	RAP1	P11938	827 aa		4.83	□□□□□ -1.64
CAR1	YPL111W	YPK2	P18961	677 aa		4.83	□□□□□ -1.64
CAR1	YPL111W	CTR86	P25355	563 aa		4.83	□□□□□ -1.64
CAR1	YPL111W	SEC17	P32602	292 aa		4.83	□□□□□ -1.64
CAR1	YPL111W	RAD23	P32628	398 aa	Known RBP	4.83	□□□□□ -1.64
CAR1	YPL111W	NSG1	P38837	291 aa		4.83	□□□□□ -1.64
CAR1	YPL111W	FAA2	P39518	744 aa		4.83	□□□□□ -1.64
CAR1	YPL111W	PAC2	P39937	518 aa		4.83	□□□□□ -1.64
CAR1	YPL111W	GAT2	P40209	560 aa		4.83	□□□□□ -1.64
CAR1	YPL111W	CDC40	P40968	455 aa	Predicted RBP	4.83	□□□□□ -1.64
CAR1	YPL111W	ATG27	P46989	271 aa		4.83	□□□□□ -1.64
CAR1	YPL111W	APM1	Q00776	475 aa	Predicted RBP	4.83	□□□□□ -1.64
CAR1	YPL111W	STD1	Q02794	444 aa		4.83	□□□□□ -1.64
CAR1	YPL111W	YLR283W	Q05867	314 aa		4.83	□□□□□ -1.64
CAR1	YPL111W	PEX27	Q08580	376 aa		4.83	□□□□□ -1.64
CAR1	YPL111W	YDL211C	Q12121	372 aa		4.83	□□□□□ -1.64
CAR1	YPL111W	JLP1	Q12358	412 aa		4.83	□□□□□ -1.64
CAR1	YPL111W	FOL3	Q12676	427 aa	Predicted RBP	4.83	□□□□□ -1.64
CAR1	YPL111W	RAS2	P01120	322 aa	Known RBP	4.82	□□□□□ -1.64
CAR1	YPL111W	CTA1	P15202	515 aa		4.82	□□□□□ -1.64
CAR1	YPL111W	HXT2	P23585	541 aa		4.82	□□□□□ -1.64
CAR1	YPL111W	ELO2	P25358	347 aa		4.82	□□□□□ -1.64
CAR1	YPL111W	YPS1	P32329	569 aa		4.82	□□□□□ -1.64
CAR1	YPL111W	ECT1	P33412	323 aa		4.82	□□□□□ -1.64
CAR1	YPL111W	AIM29	P36154	155 aa		4.82	□□□□□ -1.64
CAR1	YPL111W	RPL32	P38061	130 aa	Known RBP	4.82	□□□□□ -1.64
CAR1	YPL111W	HAM1	P47119	197 aa	Known RBP	4.82	□□□□□ -1.64
CAR1	YPL111W	PAC10	P48363	199 aa		4.82	□□□□□ -1.64
CAR1	YPL111W	LSG1	P53145	640 aa	Known RBP	4.82	□□□□□ -1.64
CAR1	YPL111W	YNL010W	P53981	241 aa	Known RBP	4.82	□□□□□ -1.64
CAR1	YPL111W	GGA1	Q06336	557 aa		4.82	□□□□□ -1.64
CAR1	YPL111W	CTS2	Q06350	511 aa		4.82	□□□□□ -1.64
CAR1	YPL111W	GRE1	Q08969	168 aa		4.82	□□□□□ -1.64
CAR1	YPL111W	PAA1	Q12447	191 aa	Known RBP	4.82	□□□□□ -1.64
CAR1	YPL111W	EHD3	P28817	500 aa		4.81	□□□□□ -1.64
CAR1	YPL111W	YBR032W	P38223	100 aa		4.81	□□□□□ -1.64
CAR1	YPL111W	PRS3	P38689	320 aa	Known RBP	4.81	□□□□□ -1.64
CAR1	YPL111W	GAB1	P41733	394 aa		4.81	□□□□□ -1.64
CAR1	YPL111W	SLI1	P53304	468 aa		4.81	□□□□□ -1.64
CAR1	YPL111W	YDR476C	Q03362	224 aa		4.81	□□□□□ -1.64
CAR1	YPL111W	INP1	Q03694	420 aa		4.81	□□□□□ -1.64
CAR1	YPL111W	RIM13	Q03792	727 aa		4.81	□□□□□ -1.64
CAR1	YPL111W	RRP17	Q04031	235 aa	Predicted RBP	4.81	□□□□□ -1.64
CAR1	YPL111W	RAF1	Q06891	181 aa		4.81	□□□□□ -1.64
CAR1	YPL111W	YEH2	Q07950	538 aa		4.81	□□□□□ -1.64
CAR1	YPL111W	YOL131W	Q08270	108 aa		4.81	□□□□□ -1.64
CAR1	YPL111W	SLF1	Q12034	447 aa	Known RBP	4.81	□□□□□ -1.64
CAR1	YPL111W	ATG31	Q12421	196 aa		4.81	□□□□□ -1.64
CAR1	YPL111W	YKL018C-A	Q3E7A7	99 aa		4.81	□□□□□ -1.64
CAR1	YPL111W	TDH2	P00358	332 aa	Known RBP	4.8	□□□□□ -1.64
CAR1	YPL111W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
CAR1	YPL111W	NHP6B	P11633	99 aa	Known RBP	4.8	□□□□□ -1.64
CAR1	YPL111W	UTR1	P21373	530 aa		4.8	□□□□□ -1.64
CAR1	YPL111W	RHB1	P25378	209 aa		4.8	□□□□□ -1.64
CAR1	YPL111W	REC114	P32841	428 aa		4.8	□□□□□ -1.64
CAR1	YPL111W	RTC2	P38279	296 aa		4.8	□□□□□ -1.64
CAR1	YPL111W	TSC10	P38342	320 aa		4.8	□□□□□ -1.64
CAR1	YPL111W	YHR122W	P38829	231 aa		4.8	□□□□□ -1.64
CAR1	YPL111W	MBB1	P39534	108 aa		4.8	□□□□□ -1.64
CAR1	YPL111W	AVT7	P40501	490 aa		4.8	□□□□□ -1.64
CAR1	YPL111W	TAX4	P47030	604 aa		4.8	□□□□□ -1.64
CAR1	YPL111W	YPL039W	Q03080	316 aa		4.8	□□□□□ -1.64
CAR1	YPL111W	GIM5	Q04493	163 aa		4.8	□□□□□ -1.64
CAR1	YPL111W	YMR226C	Q05016	267 aa	Known RBP	4.8	□□□□□ -1.64
CAR1	YPL111W	YLR036C	Q07986	203 aa		4.8	□□□□□ -1.64
CAR1	YPL111W	GEP3	Q08622	556 aa		4.8	□□□□□ -1.64
CAR1	YPL111W	RDL1	Q12305	139 aa	Known RBP	4.8	□□□□□ -1.64
CAR1	YPL111W	NOT5	Q12514	560 aa	Predicted RBP	4.8	□□□□□ -1.64
CAR1	YPL111W	SAS5	Q99314	248 aa		4.8	□□□□□ -1.64
CAR1	YPL111W	AQY1	P0CD91	305 aa		4.79	□□□□□ -1.64
CAR1	YPL111W	RPL18A	P0CX49	186 aa	Known RBP	4.79	□□□□□ -1.64
CAR1	YPL111W	RPL18B	P0CX50	186 aa	Known RBP	4.79	□□□□□ -1.64
CAR1	YPL111W	MDH2	P22133	377 aa		4.79	□□□□□ -1.64
CAR1	YPL111W	YCP4	P25349	247 aa	Known RBP	4.79	□□□□□ -1.64
CAR1	YPL111W	PPA2	P28239	310 aa		4.79	□□□□□ -1.64
CAR1	YPL111W	NUP2	P32499	720 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms