RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C YKR051WP36142 418 aa4.12□□□□□ -1.75
GDE1YPL110C YHL044WP38727 235 aa4.12□□□□□ -1.75
GDE1YPL110C YMR144WP40214 342 aaKnown RBP4.12□□□□□ -1.75
GDE1YPL110C BIO3P50277 480 aa4.12□□□□□ -1.75
GDE1YPL110C ARG5,6Q01217 863 aa4.12□□□□□ -1.75
GDE1YPL110C YMR209CQ03648 457 aa4.12□□□□□ -1.75
GDE1YPL110C YDR132CQ03900 495 aa4.12□□□□□ -1.75
GDE1YPL110C SEN15Q04675 128 aa4.12□□□□□ -1.75
GDE1YPL110C NBP2Q12163 236 aa4.12□□□□□ -1.75
GDE1YPL110C YDL177CQ12257 170 aa4.12□□□□□ -1.75
GDE1YPL110C TY1A-BLQ12266 440 aa4.12□□□□□ -1.75
GDE1YPL110C YPR145C-AQ2V2P0 78 aa4.12□□□□□ -1.75
GDE1YPL110C CKS1P20486 150 aaKnown RBP4.11□□□□□ -1.75
GDE1YPL110C YCR015CP25616 317 aa4.11□□□□□ -1.75
GDE1YPL110C CLB6P32943 380 aa4.11□□□□□ -1.75
GDE1YPL110C YKL107WP34251 309 aa4.11□□□□□ -1.75
GDE1YPL110C TAT1P38085 619 aa4.11□□□□□ -1.75
GDE1YPL110C DBP8P38719 431 aa4.11□□□□□ -1.75
GDE1YPL110C SNU13P39990 126 aaKnown RBP4.11□□□□□ -1.75
GDE1YPL110C FMP52P40008 231 aa4.11□□□□□ -1.75
GDE1YPL110C YER189WP40104 122 aa4.11□□□□□ -1.75
GDE1YPL110C ARG2P40360 574 aa4.11□□□□□ -1.75
GDE1YPL110C YHC3P47040 408 aa4.11□□□□□ -1.75
GDE1YPL110C IKS1P47042 667 aa4.11□□□□□ -1.75
GDE1YPL110C UBP16Q02863 499 aa4.11□□□□□ -1.75
GDE1YPL110C SRT1Q03175 343 aa4.11□□□□□ -1.75
GDE1YPL110C YDL199CQ12407 687 aa4.11□□□□□ -1.75
GDE1YPL110C AHA1Q12449 350 aaKnown RBP4.11□□□□□ -1.75
GDE1YPL110C RPL13AQ12690 199 aaPredicted RBP4.11□□□□□ -1.75
GDE1YPL110C YGL194C-AQ2V2P6 80 aa4.11□□□□□ -1.75
GDE1YPL110C UBR2Q07963 1872 aa4.11□□□□□ -1.75
GDE1YPL110C HVG1P0CE11 249 aa4.11□□□□□ -1.75
GDE1YPL110C SAC7P17121 654 aa4.11□□□□□ -1.75
GDE1YPL110C UGX2P32772 223 aa4.11□□□□□ -1.75
GDE1YPL110C CAT2P32796 670 aaKnown RBP4.11□□□□□ -1.75
GDE1YPL110C FRE2P36033 711 aa4.11□□□□□ -1.75
GDE1YPL110C YBR241CP38142 488 aa4.11□□□□□ -1.75
GDE1YPL110C CHS7P38843 316 aa4.11□□□□□ -1.75
GDE1YPL110C YER158CP40095 573 aa4.11□□□□□ -1.75
GDE1YPL110C TAX4P47030 604 aa4.11□□□□□ -1.75
GDE1YPL110C TAH11P47112 604 aa4.11□□□□□ -1.75
GDE1YPL110C DIA3P52290 468 aa4.11□□□□□ -1.75
GDE1YPL110C YPL067CQ02754 198 aa4.11□□□□□ -1.75
GDE1YPL110C GOT1Q03554 138 aa4.11□□□□□ -1.75
GDE1YPL110C CDC6P09119 513 aa4.11□□□□□ -1.75
GDE1YPL110C RPL24BP24000 155 aaKnown RBP4.11□□□□□ -1.75
GDE1YPL110C ERG9P29704 444 aa4.11□□□□□ -1.75
GDE1YPL110C DCW1P36091 449 aa4.11□□□□□ -1.75
GDE1YPL110C CTP1P38152 299 aa4.11□□□□□ -1.75
GDE1YPL110C YBL086CP38177 466 aa4.11□□□□□ -1.75
GDE1YPL110C AIM33Q04516 312 aa4.11□□□□□ -1.75
GDE1YPL110C GAS5Q08193 484 aa4.11□□□□□ -1.75
GDE1YPL110C THI20Q08224 551 aa4.11□□□□□ -1.75
GDE1YPL110C LCB4Q12246 624 aa4.11□□□□□ -1.75
GDE1YPL110C HAP3P13434 144 aa4.1□□□□□ -1.75
GDE1YPL110C ATP10P18496 279 aa4.1□□□□□ -1.75
GDE1YPL110C MF(ALPHA)2P32435 120 aa4.1□□□□□ -1.75
GDE1YPL110C ERG28P40030 148 aa4.1□□□□□ -1.75
GDE1YPL110C YIL012WP40551 113 aa4.1□□□□□ -1.75
GDE1YPL110C ERJ5P43613 295 aaPredicted RBP4.1□□□□□ -1.75
GDE1YPL110C CHA4P43634 648 aa4.1□□□□□ -1.75
GDE1YPL110C UBC7Q02159 165 aa4.1□□□□□ -1.75
GDE1YPL110C VPS28Q02767 242 aa4.1□□□□□ -1.75
GDE1YPL110C YMR315WQ04869 349 aaKnown RBP4.1□□□□□ -1.75
GDE1YPL110C PPH21P23594 369 aa4.1□□□□□ -1.75
GDE1YPL110C SDH4P37298 181 aa4.1□□□□□ -1.75
GDE1YPL110C ARN2P38724 620 aa4.1□□□□□ -1.75
GDE1YPL110C BNA2P47125 453 aa4.1□□□□□ -1.75
GDE1YPL110C MNN10P50108 393 aaKnown RBP4.1□□□□□ -1.75
GDE1YPL110C YGL114WP53134 725 aa4.1□□□□□ -1.75
GDE1YPL110C GTR2P53290 341 aa4.1□□□□□ -1.75
GDE1YPL110C DOT1Q04089 582 aaKnown RBP4.1□□□□□ -1.75
GDE1YPL110C PIN3Q06449 215 aa4.1□□□□□ -1.75
GDE1YPL110C FCY22Q12119 530 aa4.1□□□□□ -1.75
GDE1YPL110C SPE4Q12455 300 aa4.1□□□□□ -1.75
GDE1YPL110C SFG1Q12507 346 aa4.1□□□□□ -1.75
GDE1YPL110C SPT15P13393 240 aaKnown RBP4.1□□□□□ -1.75
GDE1YPL110C PUT3P25502 979 aaPredicted RBP4.1□□□□□ -1.75
GDE1YPL110C MAC1P35192 417 aa4.1□□□□□ -1.75
GDE1YPL110C FLO10P36170 1169 aa4.1□□□□□ -1.75
GDE1YPL110C ATG8P38182 117 aaRIP-Chip data4.1□□□□□ -1.75not detected
GDE1YPL110C EHT1P38295 451 aa4.1□□□□□ -1.75
GDE1YPL110C DOG2P38773 246 aa4.1□□□□□ -1.75
GDE1YPL110C IPT1P38954 527 aa4.1□□□□□ -1.75
GDE1YPL110C PAN6P40459 309 aa4.1□□□□□ -1.75
GDE1YPL110C YNL140CP53910 189 aa4.1□□□□□ -1.75
GDE1YPL110C TPS1Q00764 495 aaKnown RBP4.1□□□□□ -1.75
GDE1YPL110C TMA23Q03525 211 aa4.1□□□□□ -1.75
GDE1YPL110C TY1A-MR1Q04215 440 aa4.1□□□□□ -1.75
GDE1YPL110C PAM18Q07914 168 aa4.1□□□□□ -1.75
GDE1YPL110C TEN1Q07921 160 aa4.1□□□□□ -1.75
GDE1YPL110C YPL119C-AQ3E751 87 aa4.1□□□□□ -1.75
GDE1YPL110C HRP1Q99383 534 aaKnown RBP4.1□□□□□ -1.75
GDE1YPL110C COX2P00410 251 aa4.09□□□□□ -1.75
GDE1YPL110C NUC1P08466 329 aa4.09□□□□□ -1.75
GDE1YPL110C BET2P20133 325 aa4.09□□□□□ -1.75
GDE1YPL110C MAG1P22134 296 aaKnown RBP4.09□□□□□ -1.75
GDE1YPL110C MLF3P32047 452 aa4.09□□□□□ -1.75
GDE1YPL110C EMP24P32803 203 aaKnown RBP4.09□□□□□ -1.75
GDE1YPL110C THI2P38141 450 aa4.09□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms