RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C SSU72P53538 206 aaPredicted RBP2.59□□□□□ -1.99
RPN8YOR261C YPL039WQ03080 316 aa2.59□□□□□ -1.99
RPN8YOR261C SDC1Q03323 175 aa2.59□□□□□ -1.99
RPN8YOR261C CDD1Q06549 142 aa2.59□□□□□ -1.99
RPN8YOR261C PAN1P32521 1480 aa2.58□□□□□ -2
RPN8YOR261C TDH1P00360 332 aaKnown RBP2.58□□□□□ -2
RPN8YOR261C TOM40P23644 387 aaKnown RBP2.58□□□□□ -2
RPN8YOR261C ATG12P38316 186 aa2.58□□□□□ -2
RPN8YOR261C CPD1P53314 239 aa2.58□□□□□ -2
RPN8YOR261C ARP5P53946 755 aa2.58□□□□□ -2
RPN8YOR261C VBA1Q04301 562 aa2.58□□□□□ -2
RPN8YOR261C CTS2Q06350 511 aa2.58□□□□□ -2
RPN8YOR261C RPS3P05750 240 aaKnown RBP2.57□□□□□ -2
RPN8YOR261C RPC40P07703 335 aaKnown RBP2.57□□□□□ -2
RPN8YOR261C RRT12P25381 491 aa2.57□□□□□ -2
RPN8YOR261C COY1P34237 679 aa2.57□□□□□ -2
RPN8YOR261C HMT1P38074 348 aa2.57□□□□□ -2
RPN8YOR261C YHI9P38765 294 aa2.57□□□□□ -2
RPN8YOR261C YJR141WP47172 347 aaPredicted RBP2.57□□□□□ -2
RPN8YOR261C PEX31P53203 462 aa2.57□□□□□ -2
RPN8YOR261C CDC14Q00684 551 aa2.57□□□□□ -2
RPN8YOR261C ISD11Q6Q560 94 aa2.57□□□□□ -2
RPN8YOR261C YMR316C-AI2HB70 103 aa2.56□□□□□ -2
RPN8YOR261C CLB6P32943 380 aa2.56□□□□□ -2
RPN8YOR261C CSG2P35206 410 aa2.56□□□□□ -2
RPN8YOR261C TRM44Q02648 567 aaKnown RBP2.56□□□□□ -2
RPN8YOR261C YPL150WQ12152 901 aa2.56□□□□□ -2
RPN8YOR261C NOT5Q12514 560 aaPredicted RBP2.56□□□□□ -2
RPN8YOR261C YAL064W-BO13512 126 aa2.55□□□□□ -2
RPN8YOR261C COS2P0CX12 379 aa2.55□□□□□ -2
RPN8YOR261C COS3P0CX13 379 aa2.55□□□□□ -2
RPN8YOR261C DPM1P14020 267 aaKnown RBP2.55□□□□□ -2
RPN8YOR261C ARN2P38724 620 aa2.55□□□□□ -2
RPN8YOR261C RRF1P38771 230 aa2.55□□□□□ -2
RPN8YOR261C SER33P40510 469 aa2.55□□□□□ -2
RPN8YOR261C FMP33P46998 180 aa2.55□□□□□ -2
RPN8YOR261C YNL050CP53952 270 aa2.55□□□□□ -2
RPN8YOR261C SFH1Q06168 426 aa2.55□□□□□ -2
RPN8YOR261C SEC10Q06245 871 aa2.55□□□□□ -2
RPN8YOR261C YLR413WQ06689 675 aa2.55□□□□□ -2
RPN8YOR261C RDS3Q06835 107 aaPredicted RBP2.55□□□□□ -2
RPN8YOR261C YOL019WQ08157 551 aa2.55□□□□□ -2
RPN8YOR261C YOR268CQ08734 132 aa2.55□□□□□ -2
RPN8YOR261C VPS68Q12016 184 aa2.55□□□□□ -2
RPN8YOR261C NUP157P40064 1391 aaKnown RBP2.54□□□□□ -2
RPN8YOR261C RPL26AP05743 127 aaKnown RBP2.54□□□□□ -2
RPN8YOR261C CAM1P29547 415 aaKnown RBP2.54□□□□□ -2
RPN8YOR261C YKL070WP36087 169 aa2.54□□□□□ -2
RPN8YOR261C MNN5P46982 586 aa2.54□□□□□ -2
RPN8YOR261C RPL26BP53221 127 aaKnown RBP2.54□□□□□ -2
RPN8YOR261C LSB1P53281 241 aa2.54□□□□□ -2
RPN8YOR261C PLB3Q08108 686 aa2.54□□□□□ -2
RPN8YOR261C MRPL23Q12487 163 aaPredicted RBP2.54□□□□□ -2
RPN8YOR261C FMP16Q12497 93 aa2.54□□□□□ -2
RPN8YOR261C YIL002W-AQ3E7Z5 69 aa2.54□□□□□ -2
RPN8YOR261C YEL009C-AA0A023PZF2 135 aa2.53□□□□□ -2
RPN8YOR261C RPP0P05317 312 aaKnown RBP2.53□□□□□ -2
RPN8YOR261C YSR3P23501 404 aa2.53□□□□□ -2
RPN8YOR261C ICL1P28240 557 aaPredicted RBP2.53□□□□□ -2
RPN8YOR261C PEX3P28795 441 aa2.53□□□□□ -2
RPN8YOR261C YJR146WP47174 117 aa2.53□□□□□ -2
RPN8YOR261C MND1P53102 219 aa2.53□□□□□ -2
RPN8YOR261C YMR166CQ03829 368 aa2.53□□□□□ -2
RPN8YOR261C POF1P25576 258 aa2.52□□□□□ -2.01
RPN8YOR261C DAL80P26343 269 aa2.52□□□□□ -2.01
RPN8YOR261C NBP35P52920 328 aa2.52□□□□□ -2.01
RPN8YOR261C ERV25P54837 211 aaKnown RBP2.52□□□□□ -2.01
RPN8YOR261C EGD1Q02642 157 aaKnown RBP2.52□□□□□ -2.01
RPN8YOR261C GRH1Q04410 372 aaKnown RBP2.52□□□□□ -2.01
RPN8YOR261C YOS9Q99220 542 aa2.52□□□□□ -2.01
RPN8YOR261C RPL4AP10664 362 aaKnown RBP2.51□□□□□ -2.01
RPN8YOR261C BMH1P29311 267 aaKnown RBP2.51□□□□□ -2.01
RPN8YOR261C RPL4BP49626 362 aaKnown RBP2.51□□□□□ -2.01
RPN8YOR261C SWS2P53937 143 aa2.51□□□□□ -2.01
RPN8YOR261C MYO5Q04439 1219 aaKnown RBP2.51□□□□□ -2.01
RPN8YOR261C ARV1Q06541 321 aa2.51□□□□□ -2.01
RPN8YOR261C AI5_BETAQ9ZZX0 354 aa2.51□□□□□ -2.01
RPN8YOR261C RAD10P06838 210 aa2.5□□□□□ -2.01
RPN8YOR261C DSK2P48510 373 aa2.5□□□□□ -2.01
RPN8YOR261C MNT4P53745 580 aa2.5□□□□□ -2.01
RPN8YOR261C SPP2Q02521 185 aa2.5□□□□□ -2.01
RPN8YOR261C PER33Q12144 273 aa2.5□□□□□ -2.01
RPN8YOR261C SMT3Q12306 101 aaKnown RBP2.5□□□□□ -2.01
RPN8YOR261C HSM3P38348 480 aa2.49□□□□□ -2.01
RPN8YOR261C MRX5P47007 382 aa2.49□□□□□ -2.01
RPN8YOR261C CGI121Q03705 181 aaKnown RBP2.49□□□□□ -2.01
RPN8YOR261C ATC1Q04005 294 aa2.49□□□□□ -2.01
RPN8YOR261C SPO77Q06134 477 aa2.49□□□□□ -2.01
RPN8YOR261C SUE1Q06524 206 aa2.49□□□□□ -2.01
RPN8YOR261C YPL247CQ12523 523 aa2.49□□□□□ -2.01
RPN8YOR261C BEM2P39960 2167 aaKnown RBP2.49□□□□□ -2.01
RPN8YOR261C GDH2P33327 1092 aaKnown RBP2.48□□□□□ -2.01
RPN8YOR261C YHL049CP38722 271 aa2.48□□□□□ -2.01
RPN8YOR261C YHR045WP38775 560 aa2.48□□□□□ -2.01
RPN8YOR261C NPT1P39683 429 aaKnown RBP2.48□□□□□ -2.01
RPN8YOR261C COG3P40094 801 aa2.48□□□□□ -2.01
RPN8YOR261C AGX1P43567 385 aa2.48□□□□□ -2.01
RPN8YOR261C CAB4P53332 305 aa2.48□□□□□ -2.01
RPN8YOR261C YOR283WQ12040 230 aaKnown RBP2.48□□□□□ -2.01
RPN8YOR261C SSA3P09435 649 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 59.4 ms