RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C HIP1P06775 603 aa8.68□□□□□ -1.02
SPT20YOL148C HAP4P14064 554 aa8.68□□□□□ -1.02
SPT20YOL148C PRE9P23638 258 aaKnown RBP8.68□□□□□ -1.02
SPT20YOL148C IRS4P36115 615 aaKnown RBP8.68□□□□□ -1.02
SPT20YOL148C GPI16P38875 610 aa8.68□□□□□ -1.02
SPT20YOL148C TIM17P39515 158 aa8.68□□□□□ -1.02
SPT20YOL148C FLX1P40464 311 aa8.68□□□□□ -1.02
SPT20YOL148C PRY3P47033 881 aa8.68□□□□□ -1.02
SPT20YOL148C ADO1P47143 340 aaKnown RBP8.68□□□□□ -1.02
SPT20YOL148C RNH70P53331 553 aa8.68□□□□□ -1.02
SPT20YOL148C PAL1Q05518 499 aaKnown RBP8.68□□□□□ -1.02
SPT20YOL148C RDR1Q08904 546 aa8.68□□□□□ -1.02
SPT20YOL148C YCR100CP25606 316 aa8.67□□□□□ -1.02
SPT20YOL148C NTF2P33331 125 aaKnown RBP8.67□□□□□ -1.02
SPT20YOL148C DBP8P38719 431 aa8.67□□□□□ -1.02
SPT20YOL148C GET2P40056 285 aa8.67□□□□□ -1.02
SPT20YOL148C AVT4P50944 713 aa8.67□□□□□ -1.02
SPT20YOL148C MPA43P53583 542 aaPredicted RBP8.67□□□□□ -1.02
SPT20YOL148C YIF1P53845 314 aaKnown RBP8.67□□□□□ -1.02
SPT20YOL148C APM1Q00776 475 aaPredicted RBP8.67□□□□□ -1.02
SPT20YOL148C CCE1Q03702 353 aa8.67□□□□□ -1.02
SPT20YOL148C DPB4Q04603 196 aaKnown RBP8.67□□□□□ -1.02
SPT20YOL148C PDH1Q12428 516 aaKnown RBP8.67□□□□□ -1.02
SPT20YOL148C SPS4P09937 338 aa8.66□□□□□ -1.02
SPT20YOL148C PPH21P23594 369 aa8.66□□□□□ -1.02
SPT20YOL148C POT1P27796 417 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02not detected
SPT20YOL148C FUN19P28003 413 aaPredicted RBP8.66□□□□□ -1.02
SPT20YOL148C YEF1P32622 495 aa8.66□□□□□ -1.02
SPT20YOL148C SGE1P33335 543 aa8.66□□□□□ -1.02
SPT20YOL148C YEL068CP39977 110 aa8.66□□□□□ -1.02
SPT20YOL148C YOR378WQ08902 515 aa8.66□□□□□ -1.02
SPT20YOL148C YLR422WQ06409 1932 aa8.66□□□□□ -1.02
SPT20YOL148C RPS21AP0C0V8 87 aaKnown RBP8.66□□□□□ -1.02
SPT20YOL148C POP8P38208 133 aa8.66□□□□□ -1.02
SPT20YOL148C AIM3P38266 947 aaKnown RBP8.66□□□□□ -1.02
SPT20YOL148C YHR097CP38809 366 aaKnown RBP8.66□□□□□ -1.02
SPT20YOL148C SPC25P40014 221 aa8.66□□□□□ -1.02
SPT20YOL148C YIL060WP40519 144 aa8.66□□□□□ -1.02
SPT20YOL148C SEH1P53011 349 aaKnown RBP8.66□□□□□ -1.02
SPT20YOL148C FPK1P53739 893 aa8.66□□□□□ -1.02
SPT20YOL148C SMX3P54999 86 aaPredicted RBP8.66□□□□□ -1.02
SPT20YOL148C YOR114WQ12219 294 aa8.66□□□□□ -1.02
SPT20YOL148C FYV7Q12247 151 aa8.66□□□□□ -1.02
SPT20YOL148C YLR146W-AQ2V2P1 62 aa8.66□□□□□ -1.02
SPT20YOL148C COX19Q3E731 98 aa8.66□□□□□ -1.02
SPT20YOL148C PNO1Q99216 274 aaKnown RBP8.66□□□□□ -1.02
SPT20YOL148C TPI1P00942 248 aaKnown RBP8.65□□□□□ -1.02
SPT20YOL148C SCEIP03882 235 aa8.65□□□□□ -1.02
SPT20YOL148C CPA1P07258 411 aaKnown RBP8.65□□□□□ -1.02
SPT20YOL148C TY1A-HP0C2I4 478 aaKnown RBP8.65□□□□□ -1.02
SPT20YOL148C GEX1P25596 615 aa8.65□□□□□ -1.02
SPT20YOL148C YCR101CP25607 182 aa8.65□□□□□ -1.02
SPT20YOL148C PPZ2P33329 710 aa8.65□□□□□ -1.02
SPT20YOL148C GEX2P36173 615 aa8.65□□□□□ -1.02
SPT20YOL148C MGE1P38523 228 aa8.65□□□□□ -1.02
SPT20YOL148C UIP3P39547 235 aa8.65□□□□□ -1.02
SPT20YOL148C AGE2P40529 298 aa8.65□□□□□ -1.02
SPT20YOL148C SYS1P41544 203 aa8.65□□□□□ -1.02
SPT20YOL148C OTU1P43558 301 aa8.65□□□□□ -1.02
SPT20YOL148C CIN2P46670 268 aa8.65□□□□□ -1.02
SPT20YOL148C SAM37P50110 327 aa8.65□□□□□ -1.02
SPT20YOL148C UBC9P50623 157 aaPredicted RBP8.65□□□□□ -1.02
SPT20YOL148C MGA1P53050 456 aa8.65□□□□□ -1.02
SPT20YOL148C VPS62P53285 467 aa8.65□□□□□ -1.02
SPT20YOL148C CYT2Q00873 224 aa8.65□□□□□ -1.02
SPT20YOL148C YDC1Q02896 317 aa8.65□□□□□ -1.02
SPT20YOL148C RRT7Q07829 113 aa8.65□□□□□ -1.02
SPT20YOL148C MEX67Q99257 599 aaKnown RBP8.65□□□□□ -1.02
SPT20YOL148C LAC1P28496 418 aa8.64□□□□□ -1.03
SPT20YOL148C MRPL27P36526 146 aaPredicted RBP8.64□□□□□ -1.03
SPT20YOL148C EHT1P38295 451 aa8.64□□□□□ -1.03
SPT20YOL148C SUR2P38992 349 aa8.64□□□□□ -1.03
SPT20YOL148C SLZ1P40167 298 aa8.64□□□□□ -1.03
SPT20YOL148C AZF1P41696 914 aa8.64□□□□□ -1.03
SPT20YOL148C YGL204CP53089 101 aa8.64□□□□□ -1.03
SPT20YOL148C PIR1Q03178 341 aa8.64□□□□□ -1.03
SPT20YOL148C YOR365CQ08844 703 aa8.64□□□□□ -1.03
SPT20YOL148C TMA17Q12513 150 aa8.64□□□□□ -1.03
SPT20YOL148C STE7P06784 515 aa8.64□□□□□ -1.03
SPT20YOL148C SNF5P18480 905 aa8.64□□□□□ -1.03
SPT20YOL148C SEC62P21825 274 aa8.64□□□□□ -1.03
SPT20YOL148C ADH7P25377 361 aa8.64□□□□□ -1.03
SPT20YOL148C OAR1P35731 278 aa8.64□□□□□ -1.03
SPT20YOL148C HMT1P38074 348 aa8.64□□□□□ -1.03
SPT20YOL148C SFH5P47008 294 aa8.64□□□□□ -1.03
SPT20YOL148C NIF3P53081 288 aa8.64□□□□□ -1.03
SPT20YOL148C SLX9P53251 210 aaPredicted RBP8.64□□□□□ -1.03
SPT20YOL148C TMA23Q03525 211 aa8.64□□□□□ -1.03
SPT20YOL148C YMR310CQ04867 317 aaPredicted RBP8.64□□□□□ -1.03
SPT20YOL148C YDL177CQ12257 170 aa8.64□□□□□ -1.03
SPT20YOL148C AGC1Q12482 902 aa8.64□□□□□ -1.03
SPT20YOL148C YPR014CQ6B0W2 109 aa8.64□□□□□ -1.03
SPT20YOL148C CHO1P08456 276 aa8.63□□□□□ -1.03
SPT20YOL148C MCK1P21965 375 aaKnown RBP8.63□□□□□ -1.03
SPT20YOL148C POP5P28005 173 aa8.63□□□□□ -1.03
SPT20YOL148C MAL32P38158 584 aa8.63□□□□□ -1.03
SPT20YOL148C APQ12P40532 138 aa8.63□□□□□ -1.03
SPT20YOL148C MAL12P53341 584 aa8.63□□□□□ -1.03
SPT20YOL148C CTF19Q02732 369 aa8.63□□□□□ -1.03
SPT20YOL148C YDR415CQ04033 374 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms