RNA–Protein interactions for RNA: YOL145C

CTR9, Transcript of Component of the Paf1p complex involved in transcription elongation, yeastyeast

Gene CTR9, Length 3,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR9YOL145C FOL3Q12676 427 aaPredicted RBP1.36□□□□□ -2.19
CTR9YOL145C YCL012CQ8J0M4 134 aa1.36□□□□□ -2.19
CTR9YOL145C CDC36P06100 191 aaPredicted RBP1.36□□□□□ -2.19
CTR9YOL145C RPL35AP0CX84 120 aaKnown RBP1.36□□□□□ -2.19
CTR9YOL145C RPL35BP0CX85 120 aaKnown RBP1.36□□□□□ -2.19
CTR9YOL145C MER1P16523 270 aa1.36□□□□□ -2.19
CTR9YOL145C ZRT3P34240 503 aa1.36□□□□□ -2.19
CTR9YOL145C UTH1P36135 365 aa1.36□□□□□ -2.19
CTR9YOL145C PRE5P40302 234 aaKnown RBP1.36□□□□□ -2.19
CTR9YOL145C YIL012WP40551 113 aa1.36□□□□□ -2.19
CTR9YOL145C YJR012CP47087 207 aa1.36□□□□□ -2.19
CTR9YOL145C NBP35P52920 328 aa1.36□□□□□ -2.19
CTR9YOL145C YNL095CP53932 642 aa1.36□□□□□ -2.19
CTR9YOL145C YLR152CP54072 576 aa1.36□□□□□ -2.19
CTR9YOL145C YML018CQ03730 393 aa1.36□□□□□ -2.19
CTR9YOL145C YPL245WQ12179 454 aaKnown RBP1.36□□□□□ -2.19
CTR9YOL145C TIR4Q12218 487 aaPredicted RBP1.36□□□□□ -2.19
CTR9YOL145C YOS9Q99220 542 aa1.36□□□□□ -2.19
CTR9YOL145C MRP1P10662 321 aaKnown RBP1.35□□□□□ -2.19
CTR9YOL145C REV1P12689 985 aa1.35□□□□□ -2.19
CTR9YOL145C DBP7P36120 742 aaKnown RBP1.35□□□□□ -2.19
CTR9YOL145C MRX3P38172 270 aa1.35□□□□□ -2.19
CTR9YOL145C BMT2P38278 337 aa1.35□□□□□ -2.19
CTR9YOL145C GGC1P38988 300 aa1.35□□□□□ -2.19
CTR9YOL145C SEN34P39707 275 aa1.35□□□□□ -2.19
CTR9YOL145C RPC17P47076 161 aa1.35□□□□□ -2.19
CTR9YOL145C HOC1P47124 396 aa1.35□□□□□ -2.19
CTR9YOL145C YGL262WP53054 175 aa1.35□□□□□ -2.19
CTR9YOL145C YGL039WP53183 348 aaKnown RBP1.35□□□□□ -2.19
CTR9YOL145C ACT1P60010 375 aaKnown RBP1.35□□□□□ -2.19
CTR9YOL145C VPS60Q03390 229 aa1.35□□□□□ -2.19
CTR9YOL145C VHS1Q03785 461 aa1.35□□□□□ -2.19
CTR9YOL145C CDC123Q05791 360 aa1.35□□□□□ -2.19
CTR9YOL145C ECM19Q06011 112 aa1.35□□□□□ -2.19
CTR9YOL145C SPO77Q06134 477 aa1.35□□□□□ -2.19
CTR9YOL145C PLB3Q08108 686 aa1.35□□□□□ -2.19
CTR9YOL145C IKI3Q06706 1349 aaKnown RBP1.35□□□□□ -2.19
CTR9YOL145C YPK2P18961 677 aa1.35□□□□□ -2.19
CTR9YOL145C COX10P21592 462 aa1.35□□□□□ -2.19
CTR9YOL145C TAF14P35189 244 aa1.35□□□□□ -2.19
CTR9YOL145C SHE3P38272 425 aaKnown RBP1.35□□□□□ -2.19
CTR9YOL145C HIT1P46973 164 aa1.35□□□□□ -2.19
CTR9YOL145C EFM5P53200 248 aaKnown RBP1.35□□□□□ -2.19
CTR9YOL145C TRM44Q02648 567 aaKnown RBP1.35□□□□□ -2.19
CTR9YOL145C SDC1Q03323 175 aa1.35□□□□□ -2.19
CTR9YOL145C TAF9Q05027 157 aa1.35□□□□□ -2.19
CTR9YOL145C DFM1Q12743 341 aaKnown RBP1.35□□□□□ -2.19
CTR9YOL145C NCB2Q92317 146 aa1.35□□□□□ -2.19
CTR9YOL145C STH1P32597 1359 aa1.35□□□□□ -2.19
CTR9YOL145C ASP3-2P0CX77 362 aa1.34□□□□□ -2.19
CTR9YOL145C ASP3-3P0CX78 362 aa1.34□□□□□ -2.19
CTR9YOL145C ASP3-4P0CX79 362 aa1.34□□□□□ -2.19
CTR9YOL145C ASP3-1P0CZ17 362 aa1.34□□□□□ -2.19
CTR9YOL145C PBN1P25580 416 aa1.34□□□□□ -2.19
CTR9YOL145C YBL081WP38180 368 aaKnown RBP1.34□□□□□ -2.19
CTR9YOL145C GPI18P38211 433 aa1.34□□□□□ -2.19
CTR9YOL145C YHL049CP38722 271 aa1.34□□□□□ -2.19
CTR9YOL145C RPL10P41805 221 aaKnown RBP1.34□□□□□ -2.19
CTR9YOL145C ASG7P46993 209 aa1.34□□□□□ -2.19
CTR9YOL145C CUS2P53830 285 aaPredicted RBP1.34□□□□□ -2.19
CTR9YOL145C MRS2Q01926 470 aa1.34□□□□□ -2.19
CTR9YOL145C SSQ1Q05931 657 aaPredicted RBP1.34□□□□□ -2.19
CTR9YOL145C SEC10Q06245 871 aa1.34□□□□□ -2.19
CTR9YOL145C SME1Q12330 94 aaPredicted RBP1.34□□□□□ -2.19
CTR9YOL145C AI5_BETAQ9ZZX0 354 aa1.34□□□□□ -2.19
CTR9YOL145C HOM6P31116 359 aaKnown RBP1.34□□□□□ -2.19
CTR9YOL145C YOX1P34161 385 aa1.34□□□□□ -2.19
CTR9YOL145C JEN1P36035 616 aa1.34□□□□□ -2.19
CTR9YOL145C MIC12P38341 106 aa1.34□□□□□ -2.19
CTR9YOL145C DSN1P40568 576 aa1.34□□□□□ -2.19
CTR9YOL145C HAL1Q01766 294 aa1.34□□□□□ -2.19
CTR9YOL145C YMR166CQ03829 368 aa1.34□□□□□ -2.19
CTR9YOL145C UTP15Q04305 513 aaKnown RBP1.34□□□□□ -2.19
CTR9YOL145C DCR2Q05924 578 aa1.34□□□□□ -2.19
CTR9YOL145C PER33Q12144 273 aa1.34□□□□□ -2.19
CTR9YOL145C YPL119C-AQ3E751 87 aa1.34□□□□□ -2.19
CTR9YOL145C YAL064W-BO13512 126 aa1.34□□□□□ -2.2
CTR9YOL145C FUS3P16892 353 aaKnown RBP1.34□□□□□ -2.2
CTR9YOL145C IFM1P25038 676 aa1.34□□□□□ -2.2
CTR9YOL145C SPS19P32573 292 aaKnown RBP1.34□□□□□ -2.2
CTR9YOL145C HEK2P38199 381 aaKnown RBP RIP-Chip data1.34□□□□□ -2.2not detected
CTR9YOL145C MTW1P39731 289 aa1.34□□□□□ -2.2
CTR9YOL145C YRB2P40517 327 aa1.34□□□□□ -2.2
CTR9YOL145C ZRG17P53735 605 aa1.34□□□□□ -2.2
CTR9YOL145C YDR209CQ03480 137 aa1.34□□□□□ -2.2
CTR9YOL145C VIK1Q12045 647 aa1.34□□□□□ -2.2
CTR9YOL145C MON2P48563 1636 aaPredicted RBP1.33□□□□□ -2.2
CTR9YOL145C EPT1P22140 391 aa1.33□□□□□ -2.2
CTR9YOL145C IMP1P28627 190 aa1.33□□□□□ -2.2
CTR9YOL145C POP8P38208 133 aa1.33□□□□□ -2.2
CTR9YOL145C YJR079WP47126 109 aa1.33□□□□□ -2.2
CTR9YOL145C ASI3P53983 676 aa1.33□□□□□ -2.2
CTR9YOL145C DIA1P54005 336 aa1.33□□□□□ -2.2
CTR9YOL145C KRE28Q04431 385 aa1.33□□□□□ -2.2
CTR9YOL145C CSM4Q08955 156 aa1.33□□□□□ -2.2
CTR9YOL145C THP2O13539 261 aaKnown RBP1.33□□□□□ -2.2
CTR9YOL145C TPI1P00942 248 aaKnown RBP1.33□□□□□ -2.2
CTR9YOL145C CDC33P07260 213 aaKnown RBP1.33□□□□□ -2.2
CTR9YOL145C COS2P0CX12 379 aa1.33□□□□□ -2.2
CTR9YOL145C COS3P0CX13 379 aa1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms