RNA–Protein interactions for RNA: YLR465C

BSC3, Transcript of Dubious open reading frame, yeast

Gene BSC3, Length 309 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BSC3	YLR465C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.66	□□□□□ -2.3	not detected
BSC3	YLR465C	SWD2	P36104	329 aa	Predicted RBP	0.66	□□□□□ -2.3
BSC3	YLR465C	DSE2	P38844	325 aa		0.66	□□□□□ -2.3
BSC3	YLR465C	FET3	P38993	636 aa		0.66	□□□□□ -2.3
BSC3	YLR465C	FMP41	P53889	259 aa	Known RBP	0.66	□□□□□ -2.3
BSC3	YLR465C	RCF1	Q03713	159 aa		0.66	□□□□□ -2.3
BSC3	YLR465C	MHT1	Q12525	324 aa		0.66	□□□□□ -2.3
BSC3	YLR465C	YMR316C-A	I2HB70	103 aa		0.65	□□□□□ -2.31
BSC3	YLR465C	SUA5	P32579	426 aa		0.65	□□□□□ -2.31
BSC3	YLR465C	SPT4	P32914	102 aa	Predicted RBP	0.65	□□□□□ -2.31
BSC3	YLR465C	GDH2	P33327	1092 aa	Known RBP	0.65	□□□□□ -2.31
BSC3	YLR465C	YKL063C	P35725	167 aa		0.65	□□□□□ -2.31
BSC3	YLR465C	NIF3	P53081	288 aa		0.65	□□□□□ -2.31
BSC3	YLR465C	PDR16	P53860	351 aa	Known RBP	0.65	□□□□□ -2.31
BSC3	YLR465C	NUP49	Q02199	472 aa		0.65	□□□□□ -2.31
BSC3	YLR465C	YMR111C	Q04461	462 aa	Predicted RBP	0.65	□□□□□ -2.31
BSC3	YLR465C	GEP5	Q12393	293 aa		0.65	□□□□□ -2.31
BSC3	YLR465C	RNP1	P32385	249 aa		0.64	□□□□□ -2.31
BSC3	YLR465C	HMT1	P38074	348 aa		0.64	□□□□□ -2.31
BSC3	YLR465C	YER135C	P40082	130 aa		0.64	□□□□□ -2.31
BSC3	YLR465C	MPP10	P47083	593 aa	Known RBP	0.64	□□□□□ -2.31
BSC3	YLR465C	NUP57	P48837	541 aa		0.64	□□□□□ -2.31
BSC3	YLR465C	SMT3	Q12306	101 aa	Known RBP	0.64	□□□□□ -2.31
BSC3	YLR465C	SAS5	Q99314	248 aa		0.64	□□□□□ -2.31
BSC3	YLR465C	RAS2	P01120	322 aa	Known RBP	0.63	□□□□□ -2.31
BSC3	YLR465C	RAD3	P06839	778 aa		0.63	□□□□□ -2.31
BSC3	YLR465C	CAM1	P29547	415 aa	Known RBP	0.63	□□□□□ -2.31
BSC3	YLR465C	DRE2	P36152	348 aa		0.63	□□□□□ -2.31
BSC3	YLR465C	YHB1	P39676	399 aa	Known RBP	0.63	□□□□□ -2.31
BSC3	YLR465C	MDM34	P53083	459 aa		0.63	□□□□□ -2.31
BSC3	YLR465C	DAD3	P69850	94 aa		0.63	□□□□□ -2.31
BSC3	YLR465C	PRM15	Q03262	622 aa		0.63	□□□□□ -2.31
BSC3	YLR465C	VPS60	Q03390	229 aa		0.63	□□□□□ -2.31
BSC3	YLR465C	PSY3	Q12318	242 aa		0.63	□□□□□ -2.31
BSC3	YLR465C	PAA1	Q12447	191 aa	Known RBP	0.63	□□□□□ -2.31
BSC3	YLR465C	PET494	P07390	489 aa	Predicted RBP	0.62	□□□□□ -2.31
BSC3	YLR465C	RPC37	P36121	282 aa		0.62	□□□□□ -2.31
BSC3	YLR465C	MAL32	P38158	584 aa		0.62	□□□□□ -2.31
BSC3	YLR465C	SWC5	P38326	303 aa		0.62	□□□□□ -2.31
BSC3	YLR465C	YIA6	P40556	373 aa		0.62	□□□□□ -2.31
BSC3	YLR465C	CIS3	P47001	227 aa		0.62	□□□□□ -2.31
BSC3	YLR465C	MAL12	P53341	584 aa		0.62	□□□□□ -2.31
BSC3	YLR465C	TAF9	Q05027	157 aa		0.62	□□□□□ -2.31
BSC3	YLR465C	ASR1	Q06834	288 aa		0.62	□□□□□ -2.31
BSC3	YLR465C	PST1	Q12355	444 aa		0.62	□□□□□ -2.31
BSC3	YLR465C	UBR2	Q07963	1872 aa		0.61	□□□□□ -2.31
BSC3	YLR465C	PPH21	P23594	369 aa		0.61	□□□□□ -2.31
BSC3	YLR465C	UIP5	P36137	443 aa		0.61	□□□□□ -2.31
BSC3	YLR465C	APE4	P38821	490 aa		0.61	□□□□□ -2.31
BSC3	YLR465C	TEM1	P38987	245 aa		0.61	□□□□□ -2.31
BSC3	YLR465C	AIM20	P40451	204 aa		0.61	□□□□□ -2.31
BSC3	YLR465C	YJL028W	P47062	111 aa		0.61	□□□□□ -2.31
BSC3	YLR465C	COX16	P47081	118 aa		0.61	□□□□□ -2.31
BSC3	YLR465C	YPL077C	Q02831	240 aa		0.61	□□□□□ -2.31
BSC3	YLR465C	FBA1	P14540	359 aa	Known RBP	0.6	□□□□□ -2.31
BSC3	YLR465C	CCA1	P21269	546 aa		0.6	□□□□□ -2.31
BSC3	YLR465C	SMI1	P32566	505 aa		0.6	□□□□□ -2.31
BSC3	YLR465C	SWI3	P32591	825 aa		0.6	□□□□□ -2.31
BSC3	YLR465C	BLI1	P35727	113 aa		0.6	□□□□□ -2.31
BSC3	YLR465C	END3	P39013	349 aa		0.6	□□□□□ -2.31
BSC3	YLR465C	NAS2	P40555	220 aa		0.6	□□□□□ -2.31
BSC3	YLR465C	BOP2	Q06150	570 aa		0.6	□□□□□ -2.31
BSC3	YLR465C	POM33	Q12164	279 aa		0.6	□□□□□ -2.31
BSC3	YLR465C	CDC37	P06101	506 aa	Known RBP	0.59	□□□□□ -2.31
BSC3	YLR465C	MSS116	P15424	664 aa	Known RBP	0.59	□□□□□ -2.31
BSC3	YLR465C	GLE2	P40066	365 aa		0.59	□□□□□ -2.31
BSC3	YLR465C	AGX1	P43567	385 aa		0.59	□□□□□ -2.31
BSC3	YLR465C	AAH1	P53909	347 aa		0.59	□□□□□ -2.31
BSC3	YLR465C	SDC1	Q03323	175 aa		0.59	□□□□□ -2.31
BSC3	YLR465C	MGR3	Q04472	501 aa		0.59	□□□□□ -2.31
BSC3	YLR465C	LOA1	Q06508	300 aa		0.59	□□□□□ -2.31
BSC3	YLR465C	SLD7	Q08457	257 aa		0.59	□□□□□ -2.31
BSC3	YLR465C	SIA1	Q12212	622 aa		0.59	□□□□□ -2.31
BSC3	YLR465C	DCN1	Q12395	269 aa		0.59	□□□□□ -2.31
BSC3	YLR465C	CAR2	P07991	424 aa	Known RBP	0.58	□□□□□ -2.32
BSC3	YLR465C	COS2	P0CX12	379 aa		0.58	□□□□□ -2.32
BSC3	YLR465C	COS3	P0CX13	379 aa		0.58	□□□□□ -2.32
BSC3	YLR465C	POX1	P13711	748 aa		0.58	□□□□□ -2.32
BSC3	YLR465C	VMA2	P16140	517 aa	Known RBP	0.58	□□□□□ -2.32
BSC3	YLR465C	PET18	P25362	215 aa		0.58	□□□□□ -2.32
BSC3	YLR465C	RPL5	P26321	297 aa	Known RBP	0.58	□□□□□ -2.32
BSC3	YLR465C	NPT1	P39683	429 aa	Known RBP	0.58	□□□□□ -2.32
BSC3	YLR465C	SSO2	P39926	295 aa		0.58	□□□□□ -2.32
BSC3	YLR465C	VTC1	P40046	129 aa	RIP-Chip data	0.58	□□□□□ -2.32	not detected
BSC3	YLR465C	CDC40	P40968	455 aa	Predicted RBP	0.58	□□□□□ -2.32
BSC3	YLR465C	LOH1	P47055	219 aa		0.58	□□□□□ -2.32
BSC3	YLR465C	GTO1	P48239	356 aa		0.58	□□□□□ -2.32
BSC3	YLR465C	MZM1	Q03429	123 aa	Predicted RBP	0.58	□□□□□ -2.32
BSC3	YLR465C	VPS20	Q04272	221 aa		0.58	□□□□□ -2.32
BSC3	YLR465C	PGC1	Q08959	321 aa		0.58	□□□□□ -2.32
BSC3	YLR465C	SPT7	P35177	1332 aa		0.58	□□□□□ -2.32
BSC3	YLR465C	RPS3	P05750	240 aa	Known RBP	0.57	□□□□□ -2.32
BSC3	YLR465C	SAR1	P20606	190 aa	Known RBP	0.57	□□□□□ -2.32
BSC3	YLR465C	SCL1	P21243	252 aa	Known RBP	0.57	□□□□□ -2.32
BSC3	YLR465C	TDA11	P38854	504 aa		0.57	□□□□□ -2.32
BSC3	YLR465C	BMT5	P40493	336 aa		0.57	□□□□□ -2.32
BSC3	YLR465C	VOA1	P53262	265 aa		0.57	□□□□□ -2.32
BSC3	YLR465C	YDR286C	Q05530	114 aa		0.57	□□□□□ -2.32
BSC3	YLR465C	YLR297W	Q05899	129 aa		0.57	□□□□□ -2.32
BSC3	YLR465C	FKS1	P38631	1876 aa	Known RBP	0.56	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms