RNA–Protein interactions for RNA: YLR439W

MRPL4, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRPL4, Length 960 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPL4	YLR439W	GAS3	Q03655	524 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	SRL1	Q08673	210 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	YOP1	Q12402	180 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	SPO24	Q3E752	67 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	YIL002W-A	Q3E7Z5	69 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	YSF3	P0C074	85 aa	Predicted RBP	4.57	□□□□□ -1.68
MRPL4	YLR439W	PUT3	P25502	979 aa	Predicted RBP	4.57	□□□□□ -1.68
MRPL4	YLR439W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
MRPL4	YLR439W	MNN9	P39107	395 aa	Known RBP	4.57	□□□□□ -1.68
MRPL4	YLR439W	FAA2	P39518	744 aa		4.57	□□□□□ -1.68
MRPL4	YLR439W	AIM20	P40451	204 aa		4.57	□□□□□ -1.68
MRPL4	YLR439W	SIM1	P40472	476 aa		4.57	□□□□□ -1.68
MRPL4	YLR439W	YIL001W	P40560	513 aa		4.57	□□□□□ -1.68
MRPL4	YLR439W	YGR067C	P53243	804 aa		4.57	□□□□□ -1.68
MRPL4	YLR439W	SMP3	Q04174	516 aa		4.57	□□□□□ -1.68
MRPL4	YLR439W	HPT1	Q04178	221 aa	Known RBP	4.57	□□□□□ -1.68
MRPL4	YLR439W	YMR111C	Q04461	462 aa	Predicted RBP	4.57	□□□□□ -1.68
MRPL4	YLR439W	APC4	Q04601	652 aa		4.57	□□□□□ -1.68
MRPL4	YLR439W	GAS2	Q06135	555 aa		4.57	□□□□□ -1.68
MRPL4	YLR439W	BLM10	P43583	2143 aa		4.57	□□□□□ -1.68
MRPL4	YLR439W	FLO9	P39712	1322 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	STE7	P06784	515 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	YFR010W-A	P0C5N0	62 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	CAP2	P13517	287 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	CPR1	P14832	162 aa	Known RBP	4.56	□□□□□ -1.68
MRPL4	YLR439W	DBP3	P20447	523 aa	Known RBP	4.56	□□□□□ -1.68
MRPL4	YLR439W	EXG1	P23776	448 aa	Known RBP	4.56	□□□□□ -1.68
MRPL4	YLR439W	PET18	P25362	215 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	ERG9	P29704	444 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	VPS21	P36017	210 aa	Known RBP	4.56	□□□□□ -1.68
MRPL4	YLR439W	DTR1	P38125	572 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	CHK1	P38147	527 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	HSM3	P38348	480 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	YMR144W	P40214	342 aa	Known RBP	4.56	□□□□□ -1.68
MRPL4	YLR439W	APS3	P47064	194 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	WSC2	P53832	503 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	RMI1	Q02685	241 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	ERP1	Q05359	219 aa	Known RBP	4.56	□□□□□ -1.68
MRPL4	YLR439W	YLR446W	Q06204	433 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	RIF2	Q06208	395 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	YPR172W	Q06608	200 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	APC2	Q12440	853 aa		4.56	□□□□□ -1.68
MRPL4	YLR439W	TRX3	P25372	127 aa		4.55	□□□□□ -1.68
MRPL4	YLR439W	STP22	P25604	385 aa		4.55	□□□□□ -1.68
MRPL4	YLR439W	YCR090C	P25654	182 aa	Known RBP	4.55	□□□□□ -1.68
MRPL4	YLR439W	ZIP1	P31111	875 aa		4.55	□□□□□ -1.68
MRPL4	YLR439W	MNS1	P32906	549 aa		4.55	□□□□□ -1.68
MRPL4	YLR439W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
MRPL4	YLR439W	GEP4	P38812	185 aa		4.55	□□□□□ -1.68
MRPL4	YLR439W	MTC6	P38849	526 aa		4.55	□□□□□ -1.68
MRPL4	YLR439W	COA1	P40452	197 aa		4.55	□□□□□ -1.68
MRPL4	YLR439W	UTP25	P40498	721 aa	Known RBP	4.55	□□□□□ -1.68
MRPL4	YLR439W	YRB1	P41920	201 aa	Known RBP	4.55	□□□□□ -1.68
MRPL4	YLR439W	PRM10	P42946	383 aa		4.55	□□□□□ -1.68
MRPL4	YLR439W	YFL067W	P43537	175 aa		4.55	□□□□□ -1.68
MRPL4	YLR439W	YLR460C	P54007	376 aa		4.55	□□□□□ -1.68
MRPL4	YLR439W	TVP15	Q03860	143 aa		4.55	□□□□□ -1.68
MRPL4	YLR439W	MSC3	Q05812	728 aa		4.55	□□□□□ -1.68
MRPL4	YLR439W	SEC10	Q06245	871 aa		4.55	□□□□□ -1.68
MRPL4	YLR439W	MRPL35	Q06678	367 aa		4.55	□□□□□ -1.68
MRPL4	YLR439W	THP3	Q12049	470 aa	Known RBP	4.55	□□□□□ -1.68
MRPL4	YLR439W	YPL245W	Q12179	454 aa	Known RBP	4.55	□□□□□ -1.68
MRPL4	YLR439W	AIM45	Q12480	344 aa	Known RBP	4.55	□□□□□ -1.68
MRPL4	YLR439W	YPR064W	Q12492	139 aa		4.55	□□□□□ -1.68
MRPL4	YLR439W	CDC23	P16522	626 aa		4.54	□□□□□ -1.68
MRPL4	YLR439W	BMT2	P38278	337 aa		4.54	□□□□□ -1.68
MRPL4	YLR439W	RTC2	P38279	296 aa		4.54	□□□□□ -1.68
MRPL4	YLR439W	SOK1	P40317	901 aa		4.54	□□□□□ -1.68
MRPL4	YLR439W	ALB1	P47019	175 aa	Predicted RBP	4.54	□□□□□ -1.68
MRPL4	YLR439W	TAF6	P53040	516 aa		4.54	□□□□□ -1.68
MRPL4	YLR439W	RCF2	P53721	224 aa		4.54	□□□□□ -1.68
MRPL4	YLR439W	IBD2	P53892	351 aa		4.54	□□□□□ -1.68
MRPL4	YLR439W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
MRPL4	YLR439W	CAB5	Q03941	241 aa		4.54	□□□□□ -1.68
MRPL4	YLR439W	YLR413W	Q06689	675 aa		4.54	□□□□□ -1.68
MRPL4	YLR439W	MRPL23	Q12487	163 aa	Predicted RBP	4.54	□□□□□ -1.68
MRPL4	YLR439W	MET2	P08465	486 aa		4.53	□□□□□ -1.68
MRPL4	YLR439W	CBS2	P14905	389 aa		4.53	□□□□□ -1.68
MRPL4	YLR439W	RPC19	P28000	142 aa	Known RBP	4.53	□□□□□ -1.68
MRPL4	YLR439W	YEF1	P32622	495 aa		4.53	□□□□□ -1.68
MRPL4	YLR439W	VPS51	P36116	164 aa		4.53	□□□□□ -1.68
MRPL4	YLR439W	MIX23	P38162	196 aa		4.53	□□□□□ -1.68
MRPL4	YLR439W	YHR122W	P38829	231 aa		4.53	□□□□□ -1.68
MRPL4	YLR439W	YHB1	P39676	399 aa	Known RBP	4.53	□□□□□ -1.68
MRPL4	YLR439W	WWM1	P43582	211 aa	Known RBP	4.53	□□□□□ -1.68
MRPL4	YLR439W	NCA3	P46955	337 aa		4.53	□□□□□ -1.68
MRPL4	YLR439W	EFM5	P53200	248 aa	Known RBP	4.53	□□□□□ -1.68
MRPL4	YLR439W	YNL140C	P53910	189 aa		4.53	□□□□□ -1.68
MRPL4	YLR439W	HXT11	P54862	567 aa		4.53	□□□□□ -1.68
MRPL4	YLR439W	YPR091C	Q06833	770 aa		4.53	□□□□□ -1.68
MRPL4	YLR439W	NDE2	Q07500	545 aa		4.53	□□□□□ -1.68
MRPL4	YLR439W	RSA1	Q08932	381 aa		4.53	□□□□□ -1.68
MRPL4	YLR439W	GET4	Q12125	312 aa		4.53	□□□□□ -1.68
MRPL4	YLR439W	PRP46	Q12417	451 aa	Predicted RBP	4.53	□□□□□ -1.68
MRPL4	YLR439W	NOT5	Q12514	560 aa	Predicted RBP	4.53	□□□□□ -1.68
MRPL4	YLR439W	Q0144	Q9ZZW2	109 aa		4.53	□□□□□ -1.68
MRPL4	YLR439W	SPT3	P06844	337 aa		4.52	□□□□□ -1.69
MRPL4	YLR439W	SPS100	P13130	326 aa		4.52	□□□□□ -1.69
MRPL4	YLR439W	MCK1	P21965	375 aa	Known RBP	4.52	□□□□□ -1.69
MRPL4	YLR439W	PTC1	P35182	281 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms