RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W QCR7P00128 127 aa3.76□□□□□ -1.81
SOF1YLL011W RFA3P26755 122 aaKnown RBP3.76□□□□□ -1.81
SOF1YLL011W DEP1P31385 405 aa3.76□□□□□ -1.81
SOF1YLL011W ATS1P31386 333 aa3.76□□□□□ -1.81
SOF1YLL011W AST1P35183 429 aa3.76□□□□□ -1.81
SOF1YLL011W YAT2P40017 923 aa3.76□□□□□ -1.81
SOF1YLL011W ASI3P53983 676 aa3.76□□□□□ -1.81
SOF1YLL011W RPM2Q02773 1202 aa3.76□□□□□ -1.81
SOF1YLL011W YMR010WQ03687 405 aa3.76□□□□□ -1.81
SOF1YLL011W DSE3Q08729 430 aa3.76□□□□□ -1.81
SOF1YLL011W TAF10Q12030 206 aa3.76□□□□□ -1.81
SOF1YLL011W THP3Q12049 470 aaKnown RBP3.76□□□□□ -1.81
SOF1YLL011W SME1Q12330 94 aaPredicted RBP3.76□□□□□ -1.81
SOF1YLL011W TFC7Q12415 435 aa3.76□□□□□ -1.81
SOF1YLL011W HTZ1Q12692 134 aaKnown RBP3.76□□□□□ -1.81
SOF1YLL011W HEM4P06174 275 aa3.75□□□□□ -1.81
SOF1YLL011W RPL20AP0CX23 172 aaKnown RBP3.75□□□□□ -1.81
SOF1YLL011W RPL20BP0CX24 172 aaPredicted RBP3.75□□□□□ -1.81
SOF1YLL011W HOM6P31116 359 aaKnown RBP3.75□□□□□ -1.81
SOF1YLL011W KTI12P34253 313 aaKnown RBP3.75□□□□□ -1.81
SOF1YLL011W MET30P39014 640 aa3.75□□□□□ -1.81
SOF1YLL011W DIM1P41819 318 aaKnown RBP3.75□□□□□ -1.81
SOF1YLL011W NIF3P53081 288 aa3.75□□□□□ -1.81
SOF1YLL011W IBD2P53892 351 aa3.75□□□□□ -1.81
SOF1YLL011W DPP1Q05521 289 aa3.75□□□□□ -1.81
SOF1YLL011W YPR091CQ06833 770 aa3.75□□□□□ -1.81
SOF1YLL011W FCY22Q12119 530 aa3.75□□□□□ -1.81
SOF1YLL011W AYT1Q12226 474 aa3.75□□□□□ -1.81
SOF1YLL011W YCT1Q12235 531 aa3.75□□□□□ -1.81
SOF1YLL011W RPS3P05750 240 aaKnown RBP3.74□□□□□ -1.81
SOF1YLL011W RPL35AP0CX84 120 aaKnown RBP3.74□□□□□ -1.81
SOF1YLL011W RPL35BP0CX85 120 aaKnown RBP3.74□□□□□ -1.81
SOF1YLL011W MRS3P10566 314 aa3.74□□□□□ -1.81
SOF1YLL011W RNA14P25298 677 aaKnown RBP3.74□□□□□ -1.81
SOF1YLL011W CUE1P38428 203 aa3.74□□□□□ -1.81
SOF1YLL011W NDT80P38830 627 aa3.74□□□□□ -1.81
SOF1YLL011W PET8P38921 284 aa3.74□□□□□ -1.81
SOF1YLL011W PEX22P39718 180 aa3.74□□□□□ -1.81
SOF1YLL011W NCA3P46955 337 aa3.74□□□□□ -1.81
SOF1YLL011W ADO1P47143 340 aaKnown RBP3.74□□□□□ -1.81
SOF1YLL011W YPS5P53057 165 aa3.74□□□□□ -1.81
SOF1YLL011W SUR7P54003 302 aa3.74□□□□□ -1.81
SOF1YLL011W TRM44Q02648 567 aaKnown RBP3.74□□□□□ -1.81
SOF1YLL011W CTF19Q02732 369 aa3.74□□□□□ -1.81
SOF1YLL011W RNY1Q02933 434 aaKnown RBP3.74□□□□□ -1.81
SOF1YLL011W DIG1Q03063 452 aaKnown RBP3.74□□□□□ -1.81
SOF1YLL011W ARC18Q05933 178 aaKnown RBP3.74□□□□□ -1.81
SOF1YLL011W PEX30Q06169 523 aa3.74□□□□□ -1.81
SOF1YLL011W MHR1Q06630 226 aa3.74□□□□□ -1.81
SOF1YLL011W MRX9Q07349 420 aaKnown RBP3.74□□□□□ -1.81
SOF1YLL011W YOR114WQ12219 294 aa3.74□□□□□ -1.81
SOF1YLL011W UTP10P42945 1769 aaKnown RBP3.74□□□□□ -1.81
SOF1YLL011W RPL28P02406 149 aaKnown RBP3.73□□□□□ -1.81
SOF1YLL011W CYC3P06182 269 aa3.73□□□□□ -1.81
SOF1YLL011W YFL068WP0CX99 160 aa3.73□□□□□ -1.81
SOF1YLL011W YLL066W-AP0CY00 160 aa3.73□□□□□ -1.81
SOF1YLL011W YLL067W-AP0CY01 160 aa3.73□□□□□ -1.81
SOF1YLL011W ATR1P13090 542 aa3.73□□□□□ -1.81
SOF1YLL011W FBA1P14540 359 aaKnown RBP3.73□□□□□ -1.81
SOF1YLL011W SNF6P18888 332 aa3.73□□□□□ -1.81
SOF1YLL011W CKA2P19454 339 aa3.73□□□□□ -1.81
SOF1YLL011W CDC10P25342 322 aaKnown RBP3.73□□□□□ -1.81
SOF1YLL011W FUN26P31381 517 aa3.73□□□□□ -1.81
SOF1YLL011W PMT2P31382 759 aa3.73□□□□□ -1.81
SOF1YLL011W JEN1P36035 616 aa3.73□□□□□ -1.81
SOF1YLL011W YBP1P38315 674 aa3.73□□□□□ -1.81
SOF1YLL011W MAM33P40513 266 aa3.73□□□□□ -1.81
SOF1YLL011W MDV1P47025 714 aa3.73□□□□□ -1.81
SOF1YLL011W SKI8Q02793 397 aaPredicted RBP3.73□□□□□ -1.81
SOF1YLL011W PRM15Q03262 622 aa3.73□□□□□ -1.81
SOF1YLL011W GMC1Q04399 608 aa3.73□□□□□ -1.81
SOF1YLL011W TRP1P00912 224 aa3.73□□□□□ -1.81
SOF1YLL011W RPS18AP0CX55 146 aaKnown RBP3.73□□□□□ -1.81
SOF1YLL011W RPS18BP0CX56 146 aaPredicted RBP3.73□□□□□ -1.81
SOF1YLL011W YAK1P14680 807 aa3.73□□□□□ -1.81
SOF1YLL011W PRX1P34227 261 aaKnown RBP3.73□□□□□ -1.81
SOF1YLL011W VPS51P36116 164 aa3.73□□□□□ -1.81
SOF1YLL011W YBR096WP38256 230 aa3.73□□□□□ -1.81
SOF1YLL011W IKI1P38874 309 aa3.73□□□□□ -1.81
SOF1YLL011W RPR2P40571 144 aa3.73□□□□□ -1.81
SOF1YLL011W MOB2P43563 287 aa3.73□□□□□ -1.81
SOF1YLL011W IBA57P47158 497 aa3.73□□□□□ -1.81
SOF1YLL011W MGA1P53050 456 aa3.73□□□□□ -1.81
SOF1YLL011W TPN1P53099 579 aa3.73□□□□□ -1.81
SOF1YLL011W YGL159WP53110 370 aa3.73□□□□□ -1.81
SOF1YLL011W ALG13P53178 202 aa3.73□□□□□ -1.81
SOF1YLL011W WSC2P53832 503 aa3.73□□□□□ -1.81
SOF1YLL011W MRS2Q01926 470 aa3.73□□□□□ -1.81
SOF1YLL011W YLR446WQ06204 433 aa3.73□□□□□ -1.81
SOF1YLL011W YDL114WQ07530 308 aa3.73□□□□□ -1.81
SOF1YLL011W RSA1Q08932 381 aa3.73□□□□□ -1.81
SOF1YLL011W VIK1Q12045 647 aa3.73□□□□□ -1.81
SOF1YLL011W YGK3Q12222 375 aaPredicted RBP3.73□□□□□ -1.81
SOF1YLL011W JLP1Q12358 412 aa3.73□□□□□ -1.81
SOF1YLL011W SNU23Q12368 194 aaPredicted RBP3.73□□□□□ -1.81
SOF1YLL011W YDL199CQ12407 687 aa3.73□□□□□ -1.81
SOF1YLL011W PRM4Q12498 284 aa3.73□□□□□ -1.81
SOF1YLL011W YPL119C-AQ3E751 87 aa3.73□□□□□ -1.81
SOF1YLL011W PMD1P32634 1753 aa3.73□□□□□ -1.81
SOF1YLL011W MLP1Q02455 1875 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 129.1 ms