RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	GAS3	Q03655	524 aa		5.62	□□□□□ -1.51
TIF1	YKR059W	NDE2	Q07500	545 aa		5.62	□□□□□ -1.51
TIF1	YKR059W	YMR030W-A	Q3E760	96 aa		5.62	□□□□□ -1.51
TIF1	YKR059W	STE7	P06784	515 aa		5.61	□□□□□ -1.51
TIF1	YKR059W	SSC1	P0CS90	654 aa	Known RBP	5.61	□□□□□ -1.51
TIF1	YKR059W	RPS16A	P0CX51	143 aa	Known RBP	5.61	□□□□□ -1.51
TIF1	YKR059W	RPS16B	P0CX52	143 aa	Known RBP	5.61	□□□□□ -1.51
TIF1	YKR059W	TRX3	P25372	127 aa		5.61	□□□□□ -1.51
TIF1	YKR059W	YCR016W	P25617	290 aa	Known RBP	5.61	□□□□□ -1.51
TIF1	YKR059W	YCR090C	P25654	182 aa	Known RBP	5.61	□□□□□ -1.51
TIF1	YKR059W	ITR2	P30606	609 aa		5.61	□□□□□ -1.51
TIF1	YKR059W	PPZ2	P33329	710 aa		5.61	□□□□□ -1.51
TIF1	YKR059W	RPS1A	P33442	255 aa	Known RBP	5.61	□□□□□ -1.51
TIF1	YKR059W	OM14	P38325	134 aa		5.61	□□□□□ -1.51
TIF1	YKR059W	FAA2	P39518	744 aa		5.61	□□□□□ -1.51
TIF1	YKR059W	YHB1	P39676	399 aa	Known RBP	5.61	□□□□□ -1.51
TIF1	YKR059W	PSA1	P41940	361 aa	Known RBP	5.61	□□□□□ -1.51
TIF1	YKR059W	RAD17	P48581	401 aa		5.61	□□□□□ -1.51
TIF1	YKR059W	POP6	P53218	158 aa		5.61	□□□□□ -1.51
TIF1	YKR059W	SLH1	P53327	1967 aa	Known RBP	5.61	□□□□□ -1.51
TIF1	YKR059W	SRL4	Q03085	281 aa		5.61	□□□□□ -1.51
TIF1	YKR059W	YPR174C	Q06616	221 aa	Predicted RBP	5.61	□□□□□ -1.51
TIF1	YKR059W	MDM32	Q12171	622 aa		5.61	□□□□□ -1.51
TIF1	YKR059W	YPL245W	Q12179	454 aa	Known RBP	5.61	□□□□□ -1.51
TIF1	YKR059W	SEC14	P24280	304 aa	Known RBP	5.6	□□□□□ -1.51
TIF1	YKR059W	YEF1	P32622	495 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	BMT2	P38278	337 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	FLO5	P38894	1075 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	YER085C	P40058	173 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	YIL024C	P40543	189 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	YIL001W	P40560	513 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	AZF1	P41696	914 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	RPL10	P41805	221 aa	Known RBP	5.6	□□□□□ -1.51
TIF1	YKR059W	EFM5	P53200	248 aa	Known RBP	5.6	□□□□□ -1.51
TIF1	YKR059W	IBD2	P53892	351 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	LSM3	P57743	89 aa	Known RBP	5.6	□□□□□ -1.51
TIF1	YKR059W	RSC9	Q03124	581 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	GMC2	Q06201	188 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	YPL199C	Q08954	240 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	ATX2	Q12067	313 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	BSC1	Q12140	328 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	CRC1	Q12289	327 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	PRP46	Q12417	451 aa	Predicted RBP	5.6	□□□□□ -1.51
TIF1	YKR059W	MHT1	Q12525	324 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	YCL012C	Q8J0M4	134 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	YOS9	Q99220	542 aa		5.6	□□□□□ -1.51
TIF1	YKR059W	MRPL25	P23369	157 aa		5.59	□□□□□ -1.51
TIF1	YKR059W	RVS161	P25343	265 aa	Known RBP	5.59	□□□□□ -1.51
TIF1	YKR059W	ETR1	P38071	380 aa		5.59	□□□□□ -1.51
TIF1	YKR059W	GEP4	P38812	185 aa		5.59	□□□□□ -1.51
TIF1	YKR059W	MIC19	P43594	170 aa		5.59	□□□□□ -1.51
TIF1	YKR059W	SFH5	P47008	294 aa		5.59	□□□□□ -1.51
TIF1	YKR059W	NAS6	P50086	228 aa		5.59	□□□□□ -1.51
TIF1	YKR059W	LST7	P53237	242 aa		5.59	□□□□□ -1.51
TIF1	YKR059W	MRPL50	P53724	139 aa		5.59	□□□□□ -1.51
TIF1	YKR059W	BER1	Q06688	274 aa	Known RBP	5.59	□□□□□ -1.51
TIF1	YKR059W	YPR064W	Q12492	139 aa		5.59	□□□□□ -1.51
TIF1	YKR059W	UBA3	Q99344	299 aa		5.59	□□□□□ -1.51
TIF1	YKR059W	CDC36	P06100	191 aa	Predicted RBP	5.58	□□□□□ -1.52
TIF1	YKR059W	YAP1	P19880	650 aa	Known RBP	5.58	□□□□□ -1.52
TIF1	YKR059W	ITR1	P30605	584 aa		5.58	□□□□□ -1.52
TIF1	YKR059W	PCL6	P40038	420 aa		5.58	□□□□□ -1.52
TIF1	YKR059W	MSS2	P40990	351 aa		5.58	□□□□□ -1.52
TIF1	YKR059W	YNL320W	P42840	284 aa		5.58	□□□□□ -1.52
TIF1	YKR059W	AIM24	P47127	394 aa		5.58	□□□□□ -1.52
TIF1	YKR059W	YGR067C	P53243	804 aa		5.58	□□□□□ -1.52
TIF1	YKR059W	MAL13	P53338	473 aa		5.58	□□□□□ -1.52
TIF1	YKR059W	RCF2	P53721	224 aa		5.58	□□□□□ -1.52
TIF1	YKR059W	RMI1	Q02685	241 aa		5.58	□□□□□ -1.52
TIF1	YKR059W	RTT103	Q05543	409 aa		5.58	□□□□□ -1.52
TIF1	YKR059W	CTS2	Q06350	511 aa		5.58	□□□□□ -1.52
TIF1	YKR059W	YET3	Q07451	203 aa		5.58	□□□□□ -1.52
TIF1	YKR059W	ESA1	Q08649	445 aa		5.58	□□□□□ -1.52
TIF1	YKR059W	YPL247C	Q12523	523 aa		5.58	□□□□□ -1.52
TIF1	YKR059W	CBS2	P14905	389 aa		5.57	□□□□□ -1.52
TIF1	YKR059W	PUT3	P25502	979 aa	Predicted RBP	5.57	□□□□□ -1.52
TIF1	YKR059W	ARO4	P32449	370 aa	Known RBP	5.57	□□□□□ -1.52
TIF1	YKR059W	PHA2	P32452	334 aa		5.57	□□□□□ -1.52
TIF1	YKR059W	ZUO1	P32527	433 aa	Known RBP	5.57	□□□□□ -1.52
TIF1	YKR059W	GLC7	P32598	312 aa	Known RBP	5.57	□□□□□ -1.52
TIF1	YKR059W	LOS1	P33418	1100 aa	Predicted RBP	5.57	□□□□□ -1.52
TIF1	YKR059W	SWD2	P36104	329 aa	Predicted RBP	5.57	□□□□□ -1.52
TIF1	YKR059W	MST28	P39552	234 aa		5.57	□□□□□ -1.52
TIF1	YKR059W	YRB1	P41920	201 aa	Known RBP	5.57	□□□□□ -1.52
TIF1	YKR059W	ECO1	P43605	281 aa		5.57	□□□□□ -1.52
TIF1	YKR059W	ALB1	P47019	175 aa	Predicted RBP	5.57	□□□□□ -1.52
TIF1	YKR059W	PXR1	P53335	271 aa	Predicted RBP	5.57	□□□□□ -1.52
TIF1	YKR059W	MNT4	P53745	580 aa		5.57	□□□□□ -1.52
TIF1	YKR059W	SKI8	Q02793	397 aa	Predicted RBP	5.57	□□□□□ -1.52
TIF1	YKR059W	YMR010W	Q03687	405 aa		5.57	□□□□□ -1.52
TIF1	YKR059W	CSN9	Q03981	162 aa		5.57	□□□□□ -1.52
TIF1	YKR059W	GTO3	Q04806	366 aa		5.57	□□□□□ -1.52
TIF1	YKR059W	GET4	Q12125	312 aa		5.57	□□□□□ -1.52
TIF1	YKR059W	MRP1	P10662	321 aa	Known RBP	5.56	□□□□□ -1.52
TIF1	YKR059W	UTR1	P21373	530 aa		5.56	□□□□□ -1.52
TIF1	YKR059W	POP5	P28005	173 aa		5.56	□□□□□ -1.52
TIF1	YKR059W	TOA2	P32774	122 aa		5.56	□□□□□ -1.52
TIF1	YKR059W	SIP2	P34164	415 aa	Known RBP	5.56	□□□□□ -1.52
TIF1	YKR059W	YKR015C	P36111	568 aa		5.56	□□□□□ -1.52
TIF1	YKR059W	YHK8	P38776	514 aa		5.56	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms