RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C EXG2P52911 562 aa4.46□□□□□ -1.7
CAF4YKR036C ATF2P53296 535 aa4.46□□□□□ -1.7
CAF4YKR036C TDA7P53882 636 aaPredicted RBP4.46□□□□□ -1.7
CAF4YKR036C PIR3Q03180 325 aa4.46□□□□□ -1.7
CAF4YKR036C ARA2Q04212 335 aa4.46□□□□□ -1.7
CAF4YKR036C TY1A-MR1Q04215 440 aa4.46□□□□□ -1.7
CAF4YKR036C SPG3Q04398 127 aaPredicted RBP4.46□□□□□ -1.7
CAF4YKR036C AIM32Q04689 311 aa4.46□□□□□ -1.7
CAF4YKR036C RRP45Q05636 305 aaKnown RBP4.46□□□□□ -1.7
CAF4YKR036C SRO7Q12038 1033 aa4.46□□□□□ -1.7
CAF4YKR036C TY1A-BLQ12266 440 aa4.46□□□□□ -1.7
CAF4YKR036C TFC7Q12415 435 aa4.46□□□□□ -1.7
CAF4YKR036C NUM1Q00402 2748 aa4.45□□□□□ -1.7
CAF4YKR036C IRA2P19158 3079 aa4.45□□□□□ -1.7
CAF4YKR036C QCR7P00128 127 aa4.45□□□□□ -1.7
CAF4YKR036C ATG15P25641 520 aa4.45□□□□□ -1.7
CAF4YKR036C ATS1P31386 333 aa4.45□□□□□ -1.7
CAF4YKR036C EMC3P36039 253 aa4.45□□□□□ -1.7
CAF4YKR036C YPT35P38815 214 aaKnown RBP4.45□□□□□ -1.7
CAF4YKR036C AXL2P38928 823 aa4.45□□□□□ -1.7
CAF4YKR036C GAT2P40209 560 aa4.45□□□□□ -1.7
CAF4YKR036C HXT14P42833 540 aa4.45□□□□□ -1.7
CAF4YKR036C MDM34P53083 459 aa4.45□□□□□ -1.7
CAF4YKR036C APM1Q00776 475 aaPredicted RBP4.45□□□□□ -1.7
CAF4YKR036C YSA1Q01976 231 aa4.45□□□□□ -1.7
CAF4YKR036C YKR011CQ02209 353 aa4.45□□□□□ -1.7
CAF4YKR036C MRP51Q02950 344 aa4.45□□□□□ -1.7
CAF4YKR036C CTL1Q03220 320 aaKnown RBP4.45□□□□□ -1.7
CAF4YKR036C RIM13Q03792 727 aa4.45□□□□□ -1.7
CAF4YKR036C HLR1Q04429 423 aa4.45□□□□□ -1.7
CAF4YKR036C TVP18Q04767 167 aa4.45□□□□□ -1.7
CAF4YKR036C IPK1Q06667 281 aa4.45□□□□□ -1.7
CAF4YKR036C BER1Q06688 274 aaKnown RBP4.45□□□□□ -1.7
CAF4YKR036C IZH3Q07959 543 aa4.45□□□□□ -1.7
CAF4YKR036C MMT2Q08970 484 aa4.45□□□□□ -1.7
CAF4YKR036C BTS1Q12051 335 aa4.45□□□□□ -1.7
CAF4YKR036C POM33Q12164 279 aa4.45□□□□□ -1.7
CAF4YKR036C TRM13Q12383 476 aa4.45□□□□□ -1.7
CAF4YKR036C FRE6Q12473 712 aa4.45□□□□□ -1.7
CAF4YKR036C FSH3Q99369 266 aa4.45□□□□□ -1.7
CAF4YKR036C ACC1Q00955 2233 aaKnown RBP4.45□□□□□ -1.7
CAF4YKR036C ADH2P00331 348 aaKnown RBP4.44□□□□□ -1.7
CAF4YKR036C RAS1P01119 309 aa4.44□□□□□ -1.7
CAF4YKR036C RPP2BP02400 110 aaKnown RBP4.44□□□□□ -1.7
CAF4YKR036C MRPL4P36517 319 aa4.44□□□□□ -1.7
CAF4YKR036C POP8P38208 133 aa4.44□□□□□ -1.7
CAF4YKR036C RRP3P38712 501 aaKnown RBP4.44□□□□□ -1.7
CAF4YKR036C TAT2P38967 592 aa4.44□□□□□ -1.7
CAF4YKR036C PRP39P39682 629 aaKnown RBP4.44□□□□□ -1.7
CAF4YKR036C YIL165CP40446 119 aa4.44□□□□□ -1.7
CAF4YKR036C MOB2P43563 287 aa4.44□□□□□ -1.7
CAF4YKR036C PET130P47065 347 aa4.44□□□□□ -1.7
CAF4YKR036C VEL1P53058 206 aa4.44□□□□□ -1.7
CAF4YKR036C ALG12P53730 551 aa4.44□□□□□ -1.7
CAF4YKR036C RSM10Q03201 203 aa4.44□□□□□ -1.7
CAF4YKR036C YMR206WQ03695 313 aa4.44□□□□□ -1.7
CAF4YKR036C TY1A-DR2Q03964 440 aaKnown RBP4.44□□□□□ -1.7
CAF4YKR036C YDR415CQ04033 374 aaPredicted RBP4.44□□□□□ -1.7
CAF4YKR036C UTP15Q04305 513 aaKnown RBP4.44□□□□□ -1.7
CAF4YKR036C GSF2Q04697 403 aaKnown RBP4.44□□□□□ -1.7
CAF4YKR036C ARG7Q04728 441 aa4.44□□□□□ -1.7
CAF4YKR036C YMR252CQ04814 134 aa4.44□□□□□ -1.7
CAF4YKR036C ELP6Q04868 273 aa4.44□□□□□ -1.7
CAF4YKR036C CTR3Q06686 241 aa4.44□□□□□ -1.7
CAF4YKR036C SNA4Q07549 140 aa4.44□□□□□ -1.7
CAF4YKR036C BDS1Q08347 646 aa4.44□□□□□ -1.7
CAF4YKR036C NDD1Q08887 554 aa4.44□□□□□ -1.7
CAF4YKR036C FDH1Q08911 376 aa4.44□□□□□ -1.7
CAF4YKR036C YPL272CQ08984 517 aa4.44□□□□□ -1.7
CAF4YKR036C SNF5P18480 905 aa4.44□□□□□ -1.7
CAF4YKR036C ARF2P19146 181 aaKnown RBP4.44□□□□□ -1.7
CAF4YKR036C RFA1P22336 621 aaKnown RBP4.44□□□□□ -1.7
CAF4YKR036C CPR4P25334 318 aa4.44□□□□□ -1.7
CAF4YKR036C THI80P35202 319 aa4.44□□□□□ -1.7
CAF4YKR036C RMA1P36001 430 aaKnown RBP4.44□□□□□ -1.7
CAF4YKR036C OMA1P36163 345 aa4.44□□□□□ -1.7
CAF4YKR036C BAT1P38891 393 aaKnown RBP4.44□□□□□ -1.7
CAF4YKR036C TES1P41903 349 aaKnown RBP4.44□□□□□ -1.7
CAF4YKR036C SLX9P53251 210 aaPredicted RBP4.44□□□□□ -1.7
CAF4YKR036C MET31Q03081 177 aa4.44□□□□□ -1.7
CAF4YKR036C AVO2Q04749 426 aa4.44□□□□□ -1.7
CAF4YKR036C RNH202Q05635 350 aa4.44□□□□□ -1.7
CAF4YKR036C NOC4Q06512 552 aaPredicted RBP4.44□□□□□ -1.7
CAF4YKR036C AIM6Q07716 390 aa4.44□□□□□ -1.7
CAF4YKR036C AAD4Q07747 329 aa4.44□□□□□ -1.7
CAF4YKR036C PER33Q12144 273 aa4.44□□□□□ -1.7
CAF4YKR036C WSC3Q12215 556 aa4.44□□□□□ -1.7
CAF4YKR036C YLR118CQ12354 227 aa4.44□□□□□ -1.7
CAF4YKR036C ATG5Q12380 294 aa4.44□□□□□ -1.7
CAF4YKR036C YPR096CO13587 100 aa4.43□□□□□ -1.7
CAF4YKR036C GAL4P04386 881 aa4.43□□□□□ -1.7
CAF4YKR036C RPS31P05759 152 aaKnown RBP4.43□□□□□ -1.7
CAF4YKR036C PHO2P07269 559 aa4.43□□□□□ -1.7
CAF4YKR036C UBI4P0CG63 381 aaKnown RBP4.43□□□□□ -1.7
CAF4YKR036C PDX1P16451 410 aa4.43□□□□□ -1.7
CAF4YKR036C TIP1P27654 210 aaPredicted RBP4.43□□□□□ -1.7
CAF4YKR036C PUB1P32588 453 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
CAF4YKR036C ADD66P36040 267 aa4.43□□□□□ -1.7
CAF4YKR036C SRX1P36077 127 aa4.43□□□□□ -1.7
CAF4YKR036C PAU24P38155 120 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms