RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT1	YKL145W	RRG9	P40156	214 aa		4.99	□□□□□ -1.61
RPT1	YKL145W	COG5	P53951	403 aa		4.99	□□□□□ -1.61
RPT1	YKL145W	STD1	Q02794	444 aa		4.99	□□□□□ -1.61
RPT1	YKL145W	YMD8	Q03697	442 aa		4.99	□□□□□ -1.61
RPT1	YKL145W	ATG17	Q06410	417 aa		4.99	□□□□□ -1.61
RPT1	YKL145W	YPR172W	Q06608	200 aa		4.99	□□□□□ -1.61
RPT1	YKL145W	SOR2	Q07786	357 aa		4.99	□□□□□ -1.61
RPT1	YKL145W	PSF1	Q12488	208 aa		4.99	□□□□□ -1.61
RPT1	YKL145W	YPL119C-A	Q3E751	87 aa		4.99	□□□□□ -1.61
RPT1	YKL145W	YIL046W-A	Q3E7Z4	54 aa		4.99	□□□□□ -1.61
RPT1	YKL145W	TOR2	P32600	2474 aa	Known RBP	4.99	□□□□□ -1.61
RPT1	YKL145W	NFT1	P0CE68	1218 aa		4.98	□□□□□ -1.61
RPT1	YKL145W	YOL163W	P0CF20	169 aa		4.98	□□□□□ -1.61
RPT1	YKL145W	RPL20A	P0CX23	172 aa	Known RBP	4.98	□□□□□ -1.61
RPT1	YKL145W	RPL20B	P0CX24	172 aa	Predicted RBP	4.98	□□□□□ -1.61
RPT1	YKL145W	SEC62	P21825	274 aa		4.98	□□□□□ -1.61
RPT1	YKL145W	GAS1	P22146	559 aa	Known RBP	4.98	□□□□□ -1.61
RPT1	YKL145W	STP22	P25604	385 aa		4.98	□□□□□ -1.61
RPT1	YKL145W	ITR2	P30606	609 aa		4.98	□□□□□ -1.61
RPT1	YKL145W	QDR3	P38227	689 aa		4.98	□□□□□ -1.61
RPT1	YKL145W	SBE22	P38814	852 aa		4.98	□□□□□ -1.61
RPT1	YKL145W	PEX18	P38855	283 aa		4.98	□□□□□ -1.61
RPT1	YKL145W	AST2	P39945	430 aa	Known RBP	4.98	□□□□□ -1.61
RPT1	YKL145W	GAT2	P40209	560 aa		4.98	□□□□□ -1.61
RPT1	YKL145W	GCN20	P43535	752 aa	Known RBP	4.98	□□□□□ -1.61
RPT1	YKL145W	SNO3	P43544	222 aa		4.98	□□□□□ -1.61
RPT1	YKL145W	APS3	P47064	194 aa		4.98	□□□□□ -1.61
RPT1	YKL145W	DBP6	P53734	629 aa	Known RBP	4.98	□□□□□ -1.61
RPT1	YKL145W	ASI1	P54074	624 aa		4.98	□□□□□ -1.61
RPT1	YKL145W	YDL211C	Q12121	372 aa		4.98	□□□□□ -1.61
RPT1	YKL145W	PST2	Q12335	198 aa	Known RBP	4.98	□□□□□ -1.61
RPT1	YKL145W	MED11	Q99278	115 aa		4.98	□□□□□ -1.61
RPT1	YKL145W	POL2	P21951	2222 aa	Known RBP	4.98	□□□□□ -1.61
RPT1	YKL145W	RAD52	P06778	471 aa	Known RBP	4.97	□□□□□ -1.61
RPT1	YKL145W	BAR1	P12630	587 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	MAK32	P23060	363 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	YCR100C	P25606	316 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	ASF2	P32448	525 aa	Predicted RBP	4.97	□□□□□ -1.61
RPT1	YKL145W	ECM25	P32525	599 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	RPC34	P32910	317 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	YKL070W	P36087	169 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	RRP4	P38792	359 aa	Known RBP	4.97	□□□□□ -1.61
RPT1	YKL145W	SOP4	P39543	234 aa	Predicted RBP	4.97	□□□□□ -1.61
RPT1	YKL145W	SYG1	P40528	902 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	SAS2	P40963	338 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	YJR011C	P47086	261 aa	Predicted RBP	4.97	□□□□□ -1.61
RPT1	YKL145W	BAT2	P47176	376 aa	Known RBP	4.97	□□□□□ -1.61
RPT1	YKL145W	MPA43	P53583	542 aa	Predicted RBP	4.97	□□□□□ -1.61
RPT1	YKL145W	COS1	P53822	381 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	APM1	Q00776	475 aa	Predicted RBP	4.97	□□□□□ -1.61
RPT1	YKL145W	YOR214C	Q12282	236 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	PRP46	Q12417	451 aa	Predicted RBP	4.97	□□□□□ -1.61
RPT1	YKL145W	CAR2	P07991	424 aa	Known RBP	4.97	□□□□□ -1.61
RPT1	YKL145W	RPL40A	P0CH08	128 aa	Known RBP	4.97	□□□□□ -1.61
RPT1	YKL145W	RPL40B	P0CH09	128 aa	Known RBP	4.97	□□□□□ -1.61
RPT1	YKL145W	ERD2	P18414	219 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	SNF6	P18888	332 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	HMX1	P32339	317 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	ECM4	P36156	370 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	RTC2	P38279	296 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	GOS1	P38736	223 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	ISC1	P40015	477 aa	Known RBP	4.97	□□□□□ -1.61
RPT1	YKL145W	KRE29	P40026	464 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	RIB4	P50861	169 aa	Predicted RBP	4.97	□□□□□ -1.61
RPT1	YKL145W	YGL185C	P53100	379 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	DUG3	P53871	357 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	NCE101	Q02820	53 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	SNZ1	Q03148	297 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	SPC3	Q12133	184 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	YGK3	Q12222	375 aa	Predicted RBP	4.97	□□□□□ -1.61
RPT1	YKL145W	TPO4	Q12256	659 aa		4.97	□□□□□ -1.61
RPT1	YKL145W	CSF1	Q12150	2958 aa		4.96	□□□□□ -1.62
RPT1	YKL145W	YOL162W	P0CF19	215 aa		4.96	□□□□□ -1.62
RPT1	YKL145W	TFS1	P14306	219 aa		4.96	□□□□□ -1.62
RPT1	YKL145W	RPS5	P26783	225 aa	Known RBP	4.96	□□□□□ -1.62
RPT1	YKL145W	PMT2	P31382	759 aa		4.96	□□□□□ -1.62
RPT1	YKL145W	EMP70	P32802	667 aa		4.96	□□□□□ -1.62
RPT1	YKL145W	RPS20	P38701	121 aa	Known RBP	4.96	□□□□□ -1.62
RPT1	YKL145W	LEU5	P38702	357 aa		4.96	□□□□□ -1.62
RPT1	YKL145W	IPT1	P38954	527 aa		4.96	□□□□□ -1.62
RPT1	YKL145W	SEH1	P53011	349 aa	Known RBP	4.96	□□□□□ -1.62
RPT1	YKL145W	MPP6	P53725	186 aa	Predicted RBP	4.96	□□□□□ -1.62
RPT1	YKL145W	CAB5	Q03941	241 aa		4.96	□□□□□ -1.62
RPT1	YKL145W	SEI1	Q06058	285 aa		4.96	□□□□□ -1.62
RPT1	YKL145W	RRG8	Q06109	277 aa		4.96	□□□□□ -1.62
RPT1	YKL145W	BRX1	Q08235	291 aa	Known RBP	4.96	□□□□□ -1.62
RPT1	YKL145W	IRA2	P19158	3079 aa		4.95	□□□□□ -1.62
RPT1	YKL145W	MET2	P08465	486 aa		4.95	□□□□□ -1.62
RPT1	YKL145W	SSA3	P09435	649 aa	Known RBP	4.95	□□□□□ -1.62
RPT1	YKL145W	IDP1	P21954	428 aa	Known RBP	4.95	□□□□□ -1.62
RPT1	YKL145W	OAC1	P32332	324 aa		4.95	□□□□□ -1.62
RPT1	YKL145W	VMA6	P32366	345 aa	Known RBP	4.95	□□□□□ -1.62
RPT1	YKL145W	YKR015C	P36111	568 aa		4.95	□□□□□ -1.62
RPT1	YKL145W	YHR122W	P38829	231 aa		4.95	□□□□□ -1.62
RPT1	YKL145W	YNL208W	P40159	199 aa	Known RBP	4.95	□□□□□ -1.62
RPT1	YKL145W	YLR460C	P54007	376 aa		4.95	□□□□□ -1.62
RPT1	YKL145W	NUP49	Q02199	472 aa		4.95	□□□□□ -1.62
RPT1	YKL145W	URC2	Q04411	772 aa		4.95	□□□□□ -1.62
RPT1	YKL145W	ELP6	Q04868	273 aa		4.95	□□□□□ -1.62
RPT1	YKL145W	RDR1	Q08904	546 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 67.5 ms