RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W RCF2P53721 224 aa3.32□□□□□ -1.88
NUP85YJR042W YPL077CQ02831 240 aa3.32□□□□□ -1.88
NUP85YJR042W SNX3Q08826 162 aaKnown RBP3.32□□□□□ -1.88
NUP85YJR042W RPL7BQ12213 244 aaKnown RBP3.32□□□□□ -1.88
NUP85YJR042W YOP1Q12402 180 aa3.32□□□□□ -1.88
NUP85YJR042W ERP3Q12403 225 aa3.32□□□□□ -1.88
NUP85YJR042W AMD1P15274 810 aaKnown RBP3.32□□□□□ -1.88
NUP85YJR042W PMT2P31382 759 aa3.32□□□□□ -1.88
NUP85YJR042W ACB1P31787 87 aa3.32□□□□□ -1.88
NUP85YJR042W CSE1P33307 960 aa3.32□□□□□ -1.88
NUP85YJR042W ECM8P38246 354 aa3.32□□□□□ -1.88
NUP85YJR042W LAG1P38703 411 aa3.32□□□□□ -1.88
NUP85YJR042W EDC3P39998 551 aaKnown RBP3.32□□□□□ -1.88
NUP85YJR042W DIM1P41819 318 aaKnown RBP3.32□□□□□ -1.88
NUP85YJR042W KEG1P43614 200 aa3.32□□□□□ -1.88
NUP85YJR042W TAD2P47058 250 aa3.32□□□□□ -1.88
NUP85YJR042W YPT32P51996 222 aaKnown RBP3.32□□□□□ -1.88
NUP85YJR042W LSG1P53145 640 aaKnown RBP3.32□□□□□ -1.88
NUP85YJR042W TOS8P53147 276 aa3.32□□□□□ -1.88
NUP85YJR042W PEX31P53203 462 aa3.32□□□□□ -1.88
NUP85YJR042W FRE4P53746 719 aa3.32□□□□□ -1.88
NUP85YJR042W SNO2P53823 222 aa3.32□□□□□ -1.88
NUP85YJR042W OSH6Q02201 448 aa3.32□□□□□ -1.88
NUP85YJR042W PEX12Q04370 399 aa3.32□□□□□ -1.88
NUP85YJR042W RIF2Q06208 395 aa3.32□□□□□ -1.88
NUP85YJR042W YET3Q07451 203 aa3.32□□□□□ -1.88
NUP85YJR042W IRC10Q08118 586 aa3.32□□□□□ -1.88
NUP85YJR042W POM33Q12164 279 aa3.32□□□□□ -1.88
NUP85YJR042W ACF2Q12168 779 aa3.32□□□□□ -1.88
NUP85YJR042W DCN1Q12395 269 aa3.32□□□□□ -1.88
NUP85YJR042W QCR2P07257 368 aa3.31□□□□□ -1.88
NUP85YJR042W MRP1P10662 321 aaKnown RBP3.31□□□□□ -1.88
NUP85YJR042W GPA2P10823 449 aa3.31□□□□□ -1.88
NUP85YJR042W GRX2P17695 143 aaKnown RBP3.31□□□□□ -1.88
NUP85YJR042W CHA1P25379 360 aaKnown RBP3.31□□□□□ -1.88
NUP85YJR042W VPH2P32341 215 aa3.31□□□□□ -1.88
NUP85YJR042W PEX2P32800 271 aa3.31□□□□□ -1.88
NUP85YJR042W SRY1P36007 326 aa3.31□□□□□ -1.88
NUP85YJR042W SRP14P38985 146 aa3.31□□□□□ -1.88
NUP85YJR042W VAB2P40003 282 aa3.31□□□□□ -1.88
NUP85YJR042W WWM1P43582 211 aaKnown RBP3.31□□□□□ -1.88
NUP85YJR042W MIC26P50087 233 aa3.31□□□□□ -1.88
NUP85YJR042W NQM1P53228 333 aaPredicted RBP3.31□□□□□ -1.88
NUP85YJR042W CPR8P53728 308 aa3.31□□□□□ -1.88
NUP85YJR042W YDL114WQ07530 308 aa3.31□□□□□ -1.88
NUP85YJR042W CYC7P00045 113 aa3.31□□□□□ -1.88
NUP85YJR042W GCY1P14065 312 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
NUP85YJR042W RNA15P25299 296 aaPredicted RBP3.31□□□□□ -1.88
NUP85YJR042W LSB5P25369 354 aa3.31□□□□□ -1.88
NUP85YJR042W SEC1P30619 724 aaKnown RBP3.31□□□□□ -1.88
NUP85YJR042W SPS18P32572 300 aa3.31□□□□□ -1.88
NUP85YJR042W SIP2P34164 415 aaKnown RBP3.31□□□□□ -1.88
NUP85YJR042W TSA1P34760 196 aaKnown RBP3.31□□□□□ -1.88
NUP85YJR042W YKL063CP35725 167 aa3.31□□□□□ -1.88
NUP85YJR042W MCH2P36032 473 aa3.31□□□□□ -1.88
NUP85YJR042W YCR041WP37265 110 aa3.31□□□□□ -1.88
NUP85YJR042W RPL10P41805 221 aaKnown RBP3.31□□□□□ -1.88
NUP85YJR042W VMA10P48836 114 aaKnown RBP3.31□□□□□ -1.88
NUP85YJR042W MRM2P53123 320 aa3.31□□□□□ -1.88
NUP85YJR042W CPD1P53314 239 aa3.31□□□□□ -1.88
NUP85YJR042W CAF40P53829 373 aa3.31□□□□□ -1.88
NUP85YJR042W SWS2P53937 143 aa3.31□□□□□ -1.88
NUP85YJR042W RNY1Q02933 434 aaKnown RBP3.31□□□□□ -1.88
NUP85YJR042W TVP15Q03860 143 aa3.31□□□□□ -1.88
NUP85YJR042W ARC18Q05933 178 aaKnown RBP3.31□□□□□ -1.88
NUP85YJR042W YLR012CQ07927 99 aa3.31□□□□□ -1.88
NUP85YJR042W AIM39Q08223 395 aa3.31□□□□□ -1.88
NUP85YJR042W YNG1Q08465 219 aa3.31□□□□□ -1.88
NUP85YJR042W MUM3Q08750 479 aa3.31□□□□□ -1.88
NUP85YJR042W AQY1P0CD91 305 aa3.3□□□□□ -1.88
NUP85YJR042W ERG4P25340 473 aa3.3□□□□□ -1.88
NUP85YJR042W YCR007CP25354 239 aa3.3□□□□□ -1.88
NUP85YJR042W CPR3P25719 182 aa3.3□□□□□ -1.88
NUP85YJR042W ZRT1P32804 376 aa3.3□□□□□ -1.88
NUP85YJR042W RIM2P38127 377 aa3.3□□□□□ -1.88
NUP85YJR042W TDA11P38854 504 aa3.3□□□□□ -1.88
NUP85YJR042W LYS1P38998 373 aaRIP-Chip data3.3□□□□□ -1.88not detected
NUP85YJR042W VRG4P40107 337 aa3.3□□□□□ -1.88
NUP85YJR042W SER33P40510 469 aa3.3□□□□□ -1.88
NUP85YJR042W YIL054WP40524 105 aa3.3□□□□□ -1.88
NUP85YJR042W UBC13P52490 153 aa3.3□□□□□ -1.88
NUP85YJR042W VHT1P53241 593 aa3.3□□□□□ -1.88
NUP85YJR042W GPI1P53306 609 aa3.3□□□□□ -1.88
NUP85YJR042W TMA10Q06177 86 aa3.3□□□□□ -1.88
NUP85YJR042W YDL218WQ07629 317 aa3.3□□□□□ -1.88
NUP85YJR042W HNT3Q08702 217 aa3.3□□□□□ -1.88
NUP85YJR042W YLR049CQ12110 428 aa3.3□□□□□ -1.88
NUP85YJR042W TPT1Q12272 230 aaKnown RBP3.3□□□□□ -1.88
NUP85YJR042W MEX67Q99257 599 aaKnown RBP3.3□□□□□ -1.88
NUP85YJR042W IZH4Q99393 312 aa3.3□□□□□ -1.88
NUP85YJR042W ITR2P30606 609 aa3.29□□□□□ -1.88
NUP85YJR042W TFC1P32367 649 aa3.29□□□□□ -1.88
NUP85YJR042W CAT2P32796 670 aaKnown RBP3.29□□□□□ -1.88
NUP85YJR042W SRP102P36057 244 aaPredicted RBP3.29□□□□□ -1.88
NUP85YJR042W YKR073CP36153 106 aa3.29□□□□□ -1.88
NUP85YJR042W YCR087C-AP37263 153 aa3.29□□□□□ -1.88
NUP85YJR042W DER1P38307 211 aa3.29□□□□□ -1.88
NUP85YJR042W YHR035WP38769 630 aa3.29□□□□□ -1.88
NUP85YJR042W PEP8P40335 379 aa3.29□□□□□ -1.88
NUP85YJR042W ASG7P46993 209 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms