RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W RPL9BP51401 191 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W YGL185CP53100 379 aa3.22□□□□□ -1.89
NSP1YJL041W PUS2P53167 370 aa3.22□□□□□ -1.89
NSP1YJL041W PEX31P53203 462 aa3.22□□□□□ -1.89
NSP1YJL041W TIM13P53299 105 aa3.22□□□□□ -1.89
NSP1YJL041W SNO1Q03144 224 aa3.22□□□□□ -1.89
NSP1YJL041W CTK1Q03957 528 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W TRM12Q04235 462 aa3.22□□□□□ -1.89
NSP1YJL041W ECM18Q04623 453 aa3.22□□□□□ -1.89
NSP1YJL041W YMR315WQ04869 349 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W YLR446WQ06204 433 aa3.22□□□□□ -1.89
NSP1YJL041W CDD1Q06549 142 aa3.22□□□□□ -1.89
NSP1YJL041W FCF2Q12035 217 aaPredicted RBP3.22□□□□□ -1.89
NSP1YJL041W VAM3Q12241 283 aa3.22□□□□□ -1.89
NSP1YJL041W TPT1Q12272 230 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W YLR122CQ12312 125 aa3.22□□□□□ -1.89
NSP1YJL041W ATG5Q12380 294 aa3.22□□□□□ -1.89
NSP1YJL041W YLR361C-AQ3E795 98 aa3.22□□□□□ -1.89
NSP1YJL041W SUS1Q6WNK7 96 aa3.22□□□□□ -1.89
NSP1YJL041W HRP1Q99383 534 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W THP2O13539 261 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W ADE4P04046 510 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W SEC4P07560 215 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W PAU19P0CE85 124 aa3.22□□□□□ -1.89
NSP1YJL041W PAU21P0CE86 164 aa3.22□□□□□ -1.89
NSP1YJL041W PAU22P0CE87 164 aa3.22□□□□□ -1.89
NSP1YJL041W ERD1P16151 362 aa3.22□□□□□ -1.89
NSP1YJL041W EST1P17214 699 aaPredicted RBP3.22□□□□□ -1.89
NSP1YJL041W SCL1P21243 252 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W MEK1P24719 497 aaPredicted RBP3.22□□□□□ -1.89
NSP1YJL041W YCR023CP25351 611 aa3.22□□□□□ -1.89
NSP1YJL041W PAU3P25610 124 aa3.22□□□□□ -1.89
NSP1YJL041W YCR099CP25657 155 aa3.22□□□□□ -1.89
NSP1YJL041W TSA1P34760 196 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W DAD2P36162 133 aa3.22□□□□□ -1.89
NSP1YJL041W FLO10P36170 1169 aa3.22□□□□□ -1.89
NSP1YJL041W ATG8P38182 117 aaRIP-Chip data3.22□□□□□ -1.89not detected
NSP1YJL041W YJL218WP40892 196 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W PFA3P42836 336 aa3.22□□□□□ -1.89
NSP1YJL041W OTU1P43558 301 aa3.22□□□□□ -1.89
NSP1YJL041W YGL235WP53071 178 aa3.22□□□□□ -1.89
NSP1YJL041W YGR079WP53249 370 aa3.22□□□□□ -1.89
NSP1YJL041W DUS1P53759 423 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W YLR460CP54007 376 aa3.22□□□□□ -1.89
NSP1YJL041W VPS28Q02767 242 aa3.22□□□□□ -1.89
NSP1YJL041W DIG1Q03063 452 aaKnown RBP3.22□□□□□ -1.89
NSP1YJL041W RIM13Q03792 727 aa3.22□□□□□ -1.89
NSP1YJL041W THI74Q04083 370 aa3.22□□□□□ -1.89
NSP1YJL041W SHH3Q04487 196 aa3.22□□□□□ -1.89
NSP1YJL041W YDR056CQ12025 205 aa3.22□□□□□ -1.89
NSP1YJL041W POM34Q12445 299 aa3.22□□□□□ -1.89
NSP1YJL041W CDC33P07260 213 aaKnown RBP3.21□□□□□ -1.89
NSP1YJL041W TY2A-LR1P0C2J4 438 aa3.21□□□□□ -1.89
NSP1YJL041W RPS18AP0CX55 146 aaKnown RBP3.21□□□□□ -1.89
NSP1YJL041W RPS18BP0CX56 146 aaPredicted RBP3.21□□□□□ -1.89
NSP1YJL041W TY2A-FP0CX61 438 aa3.21□□□□□ -1.89
NSP1YJL041W TY2A-GR2P0CX62 438 aa3.21□□□□□ -1.89
NSP1YJL041W GCY1P14065 312 aaKnown RBP RIP-Chip data3.21□□□□□ -1.89not detected
NSP1YJL041W APE1P14904 514 aa3.21□□□□□ -1.89
NSP1YJL041W CKS1P20486 150 aaKnown RBP3.21□□□□□ -1.89
NSP1YJL041W TY2A-CP25383 438 aa3.21□□□□□ -1.89
NSP1YJL041W PUT3P25502 979 aaPredicted RBP3.21□□□□□ -1.89
NSP1YJL041W PPZ1P26570 692 aa3.21□□□□□ -1.89
NSP1YJL041W INO2P26798 304 aa3.21□□□□□ -1.89
NSP1YJL041W CAT2P32796 670 aaKnown RBP3.21□□□□□ -1.89
NSP1YJL041W YOR062CP36025 268 aa3.21□□□□□ -1.89
NSP1YJL041W YKR075CP36155 307 aa3.21□□□□□ -1.89
NSP1YJL041W MRPL36P36531 177 aa3.21□□□□□ -1.89
NSP1YJL041W YPS6P40583 537 aa3.21□□□□□ -1.89
NSP1YJL041W SPG5P42933 373 aa3.21□□□□□ -1.89
NSP1YJL041W YJL132WP47014 750 aa3.21□□□□□ -1.89
NSP1YJL041W YHC3P47040 408 aa3.21□□□□□ -1.89
NSP1YJL041W IRC8P47046 822 aa3.21□□□□□ -1.89
NSP1YJL041W INN1P53901 409 aa3.21□□□□□ -1.89
NSP1YJL041W GPI15P53961 229 aa3.21□□□□□ -1.89
NSP1YJL041W YNL033WP53964 284 aa3.21□□□□□ -1.89
NSP1YJL041W YNL019CP53975 284 aa3.21□□□□□ -1.89
NSP1YJL041W TGL2P54857 326 aa3.21□□□□□ -1.89
NSP1YJL041W CYT2Q00873 224 aa3.21□□□□□ -1.89
NSP1YJL041W TY2A-DR2Q03483 438 aa3.21□□□□□ -1.89
NSP1YJL041W GIS1Q03833 894 aa3.21□□□□□ -1.89
NSP1YJL041W SCW10Q04951 389 aa3.21□□□□□ -1.89
NSP1YJL041W ATG33Q06485 197 aa3.21□□□□□ -1.89
NSP1YJL041W ANT1Q06497 328 aa3.21□□□□□ -1.89
NSP1YJL041W HEM25Q07534 307 aa3.21□□□□□ -1.89
NSP1YJL041W TY2A-BQ12260 438 aa3.21□□□□□ -1.89
NSP1YJL041W TY2A-OR2Q12293 438 aa3.21□□□□□ -1.89
NSP1YJL041W TY2A-DR1Q12392 438 aa3.21□□□□□ -1.89
NSP1YJL041W TY2A-OR1Q12439 438 aa3.21□□□□□ -1.89
NSP1YJL041W ERG27Q12452 347 aaKnown RBP3.21□□□□□ -1.89
NSP1YJL041W MRPL23Q12487 163 aaPredicted RBP3.21□□□□□ -1.89
NSP1YJL041W TY2A-DR3Q99303 438 aa3.21□□□□□ -1.89
NSP1YJL041W ILV5P06168 395 aaKnown RBP3.21□□□□□ -1.9
NSP1YJL041W PUT1P09368 476 aa3.21□□□□□ -1.9
NSP1YJL041W YPR170W-BP0C5R9 85 aa3.21□□□□□ -1.9
NSP1YJL041W OLE1P21147 510 aaKnown RBP3.21□□□□□ -1.9
NSP1YJL041W SEC22P22214 214 aa3.21□□□□□ -1.9
NSP1YJL041W SLM5P25345 492 aaKnown RBP3.21□□□□□ -1.9
NSP1YJL041W RRP7P25368 297 aaPredicted RBP3.21□□□□□ -1.9
NSP1YJL041W PUP3P25451 205 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms