RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W QCR6P00127 147 aa1.95□□□□□ -2.1
SSF1YHR066W ARG80P07249 177 aa1.95□□□□□ -2.1
SSF1YHR066W CWP1P28319 239 aa1.95□□□□□ -2.1
SSF1YHR066W SUA5P32579 426 aa1.95□□□□□ -2.1
SSF1YHR066W GCG1P32656 232 aaKnown RBP1.95□□□□□ -2.1
SSF1YHR066W SKG6P32900 734 aaPredicted RBP1.95□□□□□ -2.1
SSF1YHR066W SMF2P38778 549 aa1.95□□□□□ -2.1
SSF1YHR066W RRG9P40156 214 aa1.95□□□□□ -2.1
SSF1YHR066W SHQ1P40486 507 aaPredicted RBP1.95□□□□□ -2.1
SSF1YHR066W YFL040WP43562 540 aa1.95□□□□□ -2.1
SSF1YHR066W BNA6P43619 295 aa1.95□□□□□ -2.1
SSF1YHR066W MRX5P47007 382 aa1.95□□□□□ -2.1
SSF1YHR066W NRM1P53718 249 aa1.95□□□□□ -2.1
SSF1YHR066W ZRG17P53735 605 aa1.95□□□□□ -2.1
SSF1YHR066W INP2Q03824 705 aa1.95□□□□□ -2.1
SSF1YHR066W YMR244WQ04018 355 aa1.95□□□□□ -2.1
SSF1YHR066W GMC2Q06201 188 aa1.95□□□□□ -2.1
SSF1YHR066W BTS1Q12051 335 aa1.95□□□□□ -2.1
SSF1YHR066W YDL211CQ12121 372 aa1.95□□□□□ -2.1
SSF1YHR066W ATG31Q12421 196 aa1.95□□□□□ -2.1
SSF1YHR066W APC1P53886 1748 aa1.95□□□□□ -2.1
SSF1YHR066W CFT1Q06632 1357 aaKnown RBP1.94□□□□□ -2.1
SSF1YHR066W NUP192P47054 1683 aa1.94□□□□□ -2.1
SSF1YHR066W SNF2P22082 1703 aa1.94□□□□□ -2.1
SSF1YHR066W CKA2P19454 339 aa1.94□□□□□ -2.1
SSF1YHR066W YSR3P23501 404 aa1.94□□□□□ -2.1
SSF1YHR066W VPS3P23643 1011 aa1.94□□□□□ -2.1
SSF1YHR066W RBK1P25332 333 aa1.94□□□□□ -2.1
SSF1YHR066W SWD2P36104 329 aaPredicted RBP1.94□□□□□ -2.1
SSF1YHR066W EFM1P38732 585 aa1.94□□□□□ -2.1
SSF1YHR066W TCD1P38756 429 aa1.94□□□□□ -2.1
SSF1YHR066W BDH1P39714 382 aa1.94□□□□□ -2.1
SSF1YHR066W RTR1P40084 226 aaPredicted RBP1.94□□□□□ -2.1
SSF1YHR066W MSS2P40990 351 aa1.94□□□□□ -2.1
SSF1YHR066W AGP3P43548 558 aa1.94□□□□□ -2.1
SSF1YHR066W KEL2P50090 882 aa1.94□□□□□ -2.1
SSF1YHR066W INP1Q03694 420 aa1.94□□□□□ -2.1
SSF1YHR066W ECM19Q06011 112 aa1.94□□□□□ -2.1
SSF1YHR066W BER1Q06688 274 aaKnown RBP1.94□□□□□ -2.1
SSF1YHR066W PBP4Q07362 185 aaKnown RBP1.94□□□□□ -2.1
SSF1YHR066W APC9Q12107 265 aa1.94□□□□□ -2.1
SSF1YHR066W YOR029WQ12243 111 aa1.94□□□□□ -2.1
SSF1YHR066W SSK22P25390 1331 aaPredicted RBP1.94□□□□□ -2.1
SSF1YHR066W FAS2P19097 1887 aaKnown RBP1.94□□□□□ -2.1
SSF1YHR066W JIP3O13555 125 aa1.93□□□□□ -2.1
SSF1YHR066W ATP6P00854 259 aa1.93□□□□□ -2.1
SSF1YHR066W REP1P03871 373 aa1.93□□□□□ -2.1
SSF1YHR066W HPR1P17629 752 aaKnown RBP1.93□□□□□ -2.1
SSF1YHR066W MRPL25P23369 157 aa1.93□□□□□ -2.1
SSF1YHR066W YCR016WP25617 290 aaKnown RBP1.93□□□□□ -2.1
SSF1YHR066W RPB9P27999 122 aa1.93□□□□□ -2.1
SSF1YHR066W KRE6P32486 720 aa1.93□□□□□ -2.1
SSF1YHR066W CBF5P33322 483 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
SSF1YHR066W BMH2P34730 273 aaKnown RBP1.93□□□□□ -2.1
SSF1YHR066W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
SSF1YHR066W BIG1P38813 335 aa1.93□□□□□ -2.1
SSF1YHR066W YIR035CP40579 254 aa1.93□□□□□ -2.1
SSF1YHR066W OTU1P43558 301 aa1.93□□□□□ -2.1
SSF1YHR066W PGA2P53903 129 aa1.93□□□□□ -2.1
SSF1YHR066W YPL080CQ02826 108 aa1.93□□□□□ -2.1
SSF1YHR066W YMR209CQ03648 457 aa1.93□□□□□ -2.1
SSF1YHR066W UTP15Q04305 513 aaKnown RBP1.93□□□□□ -2.1
SSF1YHR066W ATG38Q05789 226 aaKnown RBP1.93□□□□□ -2.1
SSF1YHR066W YLR283WQ05867 314 aa1.93□□□□□ -2.1
SSF1YHR066W GIS3Q12418 502 aa1.93□□□□□ -2.1
SSF1YHR066W TDH2P00358 332 aaKnown RBP1.92□□□□□ -2.1
SSF1YHR066W RAD3P06839 778 aa1.92□□□□□ -2.1
SSF1YHR066W SPS100P13130 326 aa1.92□□□□□ -2.1
SSF1YHR066W MET16P18408 261 aaPredicted RBP1.92□□□□□ -2.1
SSF1YHR066W RRT12P25381 491 aa1.92□□□□□ -2.1
SSF1YHR066W ITR2P30606 609 aa1.92□□□□□ -2.1
SSF1YHR066W ZRT1P32804 376 aa1.92□□□□□ -2.1
SSF1YHR066W ZRT3P34240 503 aa1.92□□□□□ -2.1
SSF1YHR066W AST1P35183 429 aa1.92□□□□□ -2.1
SSF1YHR066W PRS4P38063 326 aaPredicted RBP1.92□□□□□ -2.1
SSF1YHR066W RCK1P38622 512 aa1.92□□□□□ -2.1
SSF1YHR066W YHR035WP38769 630 aa1.92□□□□□ -2.1
SSF1YHR066W COA1P40452 197 aa1.92□□□□□ -2.1
SSF1YHR066W COS4P43542 379 aa1.92□□□□□ -2.1
SSF1YHR066W PMT4P46971 762 aa1.92□□□□□ -2.1
SSF1YHR066W RAD17P48581 401 aa1.92□□□□□ -2.1
SSF1YHR066W CGR1P53188 120 aa1.92□□□□□ -2.1
SSF1YHR066W SMD1Q02260 146 aaPredicted RBP1.92□□□□□ -2.1
SSF1YHR066W IRC4Q03036 179 aa1.92□□□□□ -2.1
SSF1YHR066W YPR172WQ06608 200 aa1.92□□□□□ -2.1
SSF1YHR066W YLR012CQ07927 99 aa1.92□□□□□ -2.1
SSF1YHR066W SDO1Q07953 250 aaKnown RBP1.92□□□□□ -2.1
SSF1YHR066W MIM1Q08176 113 aa1.92□□□□□ -2.1
SSF1YHR066W ERP3Q12403 225 aa1.92□□□□□ -2.1
SSF1YHR066W DFM1Q12743 341 aaKnown RBP1.92□□□□□ -2.1
SSF1YHR066W MHP1P43638 1398 aa1.92□□□□□ -2.1
SSF1YHR066W CDC36P06100 191 aaPredicted RBP1.91□□□□□ -2.1
SSF1YHR066W RPL31AP0C2H8 113 aaKnown RBP1.91□□□□□ -2.1
SSF1YHR066W MATALPHA1P0CY06 175 aa1.91□□□□□ -2.1
SSF1YHR066W HMLALPHA1P0CY07 175 aa1.91□□□□□ -2.1
SSF1YHR066W CTA1P15202 515 aa1.91□□□□□ -2.1
SSF1YHR066W MER1P16523 270 aa1.91□□□□□ -2.1
SSF1YHR066W DAL82P21705 255 aa1.91□□□□□ -2.1
SSF1YHR066W RPS5P26783 225 aaKnown RBP1.91□□□□□ -2.1
SSF1YHR066W FMP48P53233 369 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms