RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	MED2	Q12124	431 aa		5.7	□□□□□ -1.5
VMA3	YEL027W	CDC39	P25655	2108 aa	Known RBP	5.69	□□□□□ -1.5
VMA3	YEL027W	BLM10	P43583	2143 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	SCEI	P03882	235 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	PRB1	P09232	635 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	MRP1	P10662	321 aa	Known RBP	5.69	□□□□□ -1.5
VMA3	YEL027W	STE18	P18852	110 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	MEK1	P24719	497 aa	Predicted RBP	5.69	□□□□□ -1.5
VMA3	YEL027W	MRPL39	P36533	70 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	CCZ1	P38273	704 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	PTH1	P38876	190 aa	Known RBP	5.69	□□□□□ -1.5
VMA3	YEL027W	RTT105	P40063	208 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	DPB11	P47027	764 aa	Predicted RBP	5.69	□□□□□ -1.5
VMA3	YEL027W	PMT5	P52867	743 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	RSM28	Q03430	361 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	TDA1	Q03533	586 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	YMR252C	Q04814	134 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	BRE4	Q07660	1125 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	TY1A-BL	Q12266	440 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	YDL180W	Q12301	547 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	RRI1	Q12468	440 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	YLR099W-A	Q3E798	87 aa		5.69	□□□□□ -1.5
VMA3	YEL027W	UTP20	P35194	2493 aa	Known RBP	5.69	□□□□□ -1.5
VMA3	YEL027W	RPS16A	P0CX51	143 aa	Known RBP	5.68	□□□□□ -1.5
VMA3	YEL027W	RPS16B	P0CX52	143 aa	Known RBP	5.68	□□□□□ -1.5
VMA3	YEL027W	MTH1	P35198	433 aa		5.68	□□□□□ -1.5
VMA3	YEL027W	SPT10	P35208	640 aa		5.68	□□□□□ -1.5
VMA3	YEL027W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
VMA3	YEL027W	PEX32	P38292	413 aa		5.68	□□□□□ -1.5
VMA3	YEL027W	SEN34	P39707	275 aa		5.68	□□□□□ -1.5
VMA3	YEL027W	BOL3	P39724	118 aa		5.68	□□□□□ -1.5
VMA3	YEL027W	YGL204C	P53089	101 aa		5.68	□□□□□ -1.5
VMA3	YEL027W	PCP1	P53259	346 aa		5.68	□□□□□ -1.5
VMA3	YEL027W	MTM1	P53320	366 aa		5.68	□□□□□ -1.5
VMA3	YEL027W	PET191	Q02772	108 aa		5.68	□□□□□ -1.5
VMA3	YEL027W	SSY1	Q03770	852 aa		5.68	□□□□□ -1.5
VMA3	YEL027W	HLR1	Q04429	423 aa		5.68	□□□□□ -1.5
VMA3	YEL027W	COQ11	Q05892	277 aa		5.68	□□□□□ -1.5
VMA3	YEL027W	RTC5	Q12108	567 aa	Known RBP	5.68	□□□□□ -1.5
VMA3	YEL027W	FOL3	Q12676	427 aa	Predicted RBP	5.68	□□□□□ -1.5
VMA3	YEL027W	GCN4	P03069	281 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	HEM4	P06174	275 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	SPS100	P13130	326 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	ITR1	P30605	584 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	PAU2	P32612	120 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	PPG1	P32838	368 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	SFK1	P35735	353 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	YBR096W	P38256	230 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	SDS24	P38314	527 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	YCK3	P39962	524 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	FCY21	P40039	528 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	AAD14	P42884	376 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	SLS1	P42900	643 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	PAM16	P42949	149 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	SCY1	P53009	804 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	ELA1	P53861	379 aa	Predicted RBP	5.67	□□□□□ -1.5
VMA3	YEL027W	YNL165W	P53891	406 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	ASI3	P53983	676 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	MRP51	Q02950	344 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	YMR265C	Q03508	461 aa	Known RBP	5.67	□□□□□ -1.5
VMA3	YEL027W	YAP6	Q03935	383 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	YDR387C	Q04162	555 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	RAF1	Q06891	181 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	NGL1	Q08213	363 aa	Known RBP	5.67	□□□□□ -1.5
VMA3	YEL027W	SUS1	Q6WNK7	96 aa		5.67	□□□□□ -1.5
VMA3	YEL027W	DBF2	P22204	572 aa		5.66	□□□□□ -1.5
VMA3	YEL027W	RPI1	P23250	407 aa	Known RBP	5.66	□□□□□ -1.5
VMA3	YEL027W	YCR016W	P25617	290 aa	Known RBP	5.66	□□□□□ -1.5
VMA3	YEL027W	MTR2	P34232	184 aa	Known RBP	5.66	□□□□□ -1.5
VMA3	YEL027W	CLG1	P35190	452 aa		5.66	□□□□□ -1.5
VMA3	YEL027W	FRM2	P37261	193 aa		5.66	□□□□□ -1.5
VMA3	YEL027W	YBR137W	P38276	179 aa		5.66	□□□□□ -1.5
VMA3	YEL027W	MTC6	P38849	526 aa		5.66	□□□□□ -1.5
VMA3	YEL027W	PUG1	P40100	303 aa		5.66	□□□□□ -1.5
VMA3	YEL027W	YMR144W	P40214	342 aa	Known RBP	5.66	□□□□□ -1.5
VMA3	YEL027W	TIR3	P40552	269 aa		5.66	□□□□□ -1.5
VMA3	YEL027W	LOH1	P47055	219 aa		5.66	□□□□□ -1.5
VMA3	YEL027W	MSE1	P48525	536 aa		5.66	□□□□□ -1.5
VMA3	YEL027W	IMD3	P50095	523 aa	Known RBP	5.66	□□□□□ -1.5
VMA3	YEL027W	RAI1	P53063	387 aa	Known RBP	5.66	□□□□□ -1.5
VMA3	YEL027W	SAM50	P53969	484 aa		5.66	□□□□□ -1.5
VMA3	YEL027W	YLR152C	P54072	576 aa		5.66	□□□□□ -1.5
VMA3	YEL027W	DIG2	Q03373	323 aa	Known RBP	5.66	□□□□□ -1.5
VMA3	YEL027W	MSS11	Q03825	758 aa		5.66	□□□□□ -1.5
VMA3	YEL027W	YBL113C	Q7M4S9	792 aa		5.66	□□□□□ -1.5
VMA3	YEL027W	SOD2	P00447	233 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	RPL6B	P05739	176 aa	Known RBP	5.65	□□□□□ -1.5
VMA3	YEL027W	HIS3	P06633	220 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	NAM2	P11325	894 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	STF2	P16965	84 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	SED4	P25365	1065 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	ZRT3	P34240	503 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	TMA19	P35691	167 aa	Known RBP	5.65	□□□□□ -1.5
VMA3	YEL027W	MBA1	P38300	278 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	YGP1	P38616	354 aa	Known RBP	5.65	□□□□□ -1.5
VMA3	YEL027W	DLS1	P40366	167 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	IDP2	P41939	412 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	SER2	P42941	309 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	ATG18	P43601	500 aa		5.65	□□□□□ -1.5
VMA3	YEL027W	YJR120W	P47157	116 aa		5.65	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms