RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W ISD11Q6Q560 94 aa1.46□□□□□ -2.18
VPS52YDR484W YAL064W-BO13512 126 aa1.45□□□□□ -2.18
VPS52YDR484W FRS2P15625 503 aaKnown RBP1.45□□□□□ -2.18
VPS52YDR484W DBP3P20447 523 aaKnown RBP1.45□□□□□ -2.18
VPS52YDR484W ATG15P25641 520 aa1.45□□□□□ -2.18
VPS52YDR484W EBP2P36049 427 aaKnown RBP1.45□□□□□ -2.18
VPS52YDR484W MRX5P47007 382 aa1.45□□□□□ -2.18
VPS52YDR484W OST3P48439 350 aa1.45□□□□□ -2.18
VPS52YDR484W TRM44Q02648 567 aaKnown RBP1.45□□□□□ -2.18
VPS52YDR484W SEC10Q06245 871 aa1.45□□□□□ -2.18
VPS52YDR484W MRPL23Q12487 163 aaPredicted RBP1.45□□□□□ -2.18
VPS52YDR484W RPS3P05750 240 aaKnown RBP1.44□□□□□ -2.18
VPS52YDR484W RPC40P07703 335 aaKnown RBP1.44□□□□□ -2.18
VPS52YDR484W YSR3P23501 404 aa1.44□□□□□ -2.18
VPS52YDR484W PEX3P28795 441 aa1.44□□□□□ -2.18
VPS52YDR484W BMH1P29311 267 aaKnown RBP1.44□□□□□ -2.18
VPS52YDR484W PEX18P38855 283 aa1.44□□□□□ -2.18
VPS52YDR484W PCL7P40186 285 aa1.44□□□□□ -2.18
VPS52YDR484W YJR141WP47172 347 aaPredicted RBP1.44□□□□□ -2.18
VPS52YDR484W YGL185CP53100 379 aa1.44□□□□□ -2.18
VPS52YDR484W PEX31P53203 462 aa1.44□□□□□ -2.18
VPS52YDR484W PER33Q12144 273 aa1.44□□□□□ -2.18
VPS52YDR484W PAN1P32521 1480 aa1.44□□□□□ -2.18
VPS52YDR484W ATG12P38316 186 aa1.44□□□□□ -2.18
VPS52YDR484W RRF1P38771 230 aa1.44□□□□□ -2.18
VPS52YDR484W YER188WP40103 239 aa1.44□□□□□ -2.18
VPS52YDR484W MND1P53102 219 aa1.44□□□□□ -2.18
VPS52YDR484W RGM1Q00453 211 aa1.44□□□□□ -2.18
VPS52YDR484W SDC1Q03323 175 aa1.44□□□□□ -2.18
VPS52YDR484W VBA1Q04301 562 aa1.44□□□□□ -2.18
VPS52YDR484W SFH1Q06168 426 aa1.44□□□□□ -2.18
VPS52YDR484W FMP16Q12497 93 aa1.44□□□□□ -2.18
VPS52YDR484W TDH1P00360 332 aaKnown RBP1.43□□□□□ -2.18
VPS52YDR484W CSG2P35206 410 aa1.43□□□□□ -2.18
VPS52YDR484W YKL070WP36087 169 aa1.43□□□□□ -2.18
VPS52YDR484W SPT8P38915 602 aa1.43□□□□□ -2.18
VPS52YDR484W SHC1P39000 512 aa1.43□□□□□ -2.18
VPS52YDR484W FMP41P53889 259 aaKnown RBP1.43□□□□□ -2.18
VPS52YDR484W YOS9Q99220 542 aa1.43□□□□□ -2.18
VPS52YDR484W SNF6P18888 332 aa1.42□□□□□ -2.18
VPS52YDR484W HMT1P38074 348 aa1.42□□□□□ -2.18
VPS52YDR484W TIM21P53220 239 aa1.42□□□□□ -2.18
VPS52YDR484W ERV25P54837 211 aaKnown RBP1.42□□□□□ -2.18
VPS52YDR484W SPP2Q02521 185 aa1.42□□□□□ -2.18
VPS52YDR484W YPL039WQ03080 316 aa1.42□□□□□ -2.18
VPS52YDR484W FCF1Q05498 189 aaPredicted RBP1.42□□□□□ -2.18
VPS52YDR484W SSA3P09435 649 aaKnown RBP1.42□□□□□ -2.18
VPS52YDR484W CLB6P32943 380 aa1.42□□□□□ -2.18
VPS52YDR484W COY1P34237 679 aa1.42□□□□□ -2.18
VPS52YDR484W ARN2P38724 620 aa1.42□□□□□ -2.18
VPS52YDR484W MED6P38782 295 aa1.42□□□□□ -2.18
VPS52YDR484W FMP33P46998 180 aa1.42□□□□□ -2.18
VPS52YDR484W PIR5P46999 287 aa1.42□□□□□ -2.18
VPS52YDR484W SSU72P53538 206 aaPredicted RBP1.42□□□□□ -2.18
VPS52YDR484W LOA1Q06508 300 aa1.42□□□□□ -2.18
VPS52YDR484W YOL019WQ08157 551 aa1.42□□□□□ -2.18
VPS52YDR484W TY3A-GQ12173 290 aa1.42□□□□□ -2.18
VPS52YDR484W SMT3Q12306 101 aaKnown RBP1.42□□□□□ -2.18
VPS52YDR484W AGC1Q12482 902 aa1.42□□□□□ -2.18
VPS52YDR484W TY3A-IQ99219 290 aa1.42□□□□□ -2.18
VPS52YDR484W RPL4AP10664 362 aaKnown RBP1.41□□□□□ -2.18
VPS52YDR484W HSM3P38348 480 aa1.41□□□□□ -2.18
VPS52YDR484W NPT1P39683 429 aaKnown RBP1.41□□□□□ -2.18
VPS52YDR484W MNN5P46982 586 aa1.41□□□□□ -2.18
VPS52YDR484W TAD2P47058 250 aa1.41□□□□□ -2.18
VPS52YDR484W RPL4BP49626 362 aaKnown RBP1.41□□□□□ -2.18
VPS52YDR484W SLX9P53251 210 aaPredicted RBP1.41□□□□□ -2.18
VPS52YDR484W LSB1P53281 241 aa1.41□□□□□ -2.18
VPS52YDR484W MYO5Q04439 1219 aaKnown RBP1.41□□□□□ -2.18
VPS52YDR484W SPO77Q06134 477 aa1.41□□□□□ -2.18
VPS52YDR484W GMC2Q06201 188 aa1.41□□□□□ -2.18
VPS52YDR484W YBL112CQ3E7Y4 105 aa1.41□□□□□ -2.18
VPS52YDR484W RPL26AP05743 127 aaKnown RBP1.4□□□□□ -2.18
VPS52YDR484W TOM40P23644 387 aaKnown RBP1.4□□□□□ -2.18
VPS52YDR484W POF1P25576 258 aa1.4□□□□□ -2.18
VPS52YDR484W SFC1P33303 322 aa1.4□□□□□ -2.18
VPS52YDR484W YGP1P38616 354 aaKnown RBP1.4□□□□□ -2.18
VPS52YDR484W TEM1P38987 245 aa1.4□□□□□ -2.18
VPS52YDR484W SER33P40510 469 aa1.4□□□□□ -2.18
VPS52YDR484W NIF3P53081 288 aa1.4□□□□□ -2.18
VPS52YDR484W RPL26BP53221 127 aaKnown RBP1.4□□□□□ -2.18
VPS52YDR484W MNT4P53745 580 aa1.4□□□□□ -2.18
VPS52YDR484W AI5_BETAQ9ZZX0 354 aa1.4□□□□□ -2.18
VPS52YDR484W DPM1P14020 267 aaKnown RBP1.4□□□□□ -2.19
VPS52YDR484W MET16P18408 261 aaPredicted RBP1.4□□□□□ -2.19
VPS52YDR484W DRE2P36152 348 aa1.4□□□□□ -2.19
VPS52YDR484W EMC2P47133 292 aaKnown RBP1.4□□□□□ -2.19
VPS52YDR484W DSK2P48510 373 aa1.4□□□□□ -2.19
VPS52YDR484W GRH1Q04410 372 aaKnown RBP1.4□□□□□ -2.19
VPS52YDR484W CTR3Q06686 241 aa1.4□□□□□ -2.19
VPS52YDR484W RDS3Q06835 107 aaPredicted RBP1.4□□□□□ -2.19
VPS52YDR484W SSK22P25390 1331 aaPredicted RBP1.4□□□□□ -2.19
VPS52YDR484W RAD3P06839 778 aa1.39□□□□□ -2.19
VPS52YDR484W DPB2P24482 689 aaPredicted RBP1.39□□□□□ -2.19
VPS52YDR484W YHR045WP38775 560 aa1.39□□□□□ -2.19
VPS52YDR484W AGX1P43567 385 aa1.39□□□□□ -2.19
VPS52YDR484W NBP35P52920 328 aa1.39□□□□□ -2.19
VPS52YDR484W KAP114P53067 1004 aa1.39□□□□□ -2.19
VPS52YDR484W SWS2P53937 143 aa1.39□□□□□ -2.19
VPS52YDR484W YMR166CQ03829 368 aa1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms