RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C CTR3Q06686 241 aa3.43□□□□□ -1.86
LSM6YDR378C YPL150WQ12152 901 aa3.43□□□□□ -1.86
LSM6YDR378C HIS1P00498 297 aaKnown RBP3.42□□□□□ -1.86
LSM6YDR378C IME2P32581 645 aa3.42□□□□□ -1.86
LSM6YDR378C YBL081WP38180 368 aaKnown RBP3.42□□□□□ -1.86
LSM6YDR378C COA1P40452 197 aa3.42□□□□□ -1.86
LSM6YDR378C TVP15Q03860 143 aa3.42□□□□□ -1.86
LSM6YDR378C KAP95Q06142 861 aaKnown RBP3.42□□□□□ -1.86
LSM6YDR378C MRX4Q12467 430 aa3.42□□□□□ -1.86
LSM6YDR378C YOS9Q99220 542 aa3.42□□□□□ -1.86
LSM6YDR378C ERG2P32352 222 aa3.41□□□□□ -1.86
LSM6YDR378C ALK2P32789 676 aaPredicted RBP3.41□□□□□ -1.86
LSM6YDR378C YHI9P38765 294 aa3.41□□□□□ -1.86
LSM6YDR378C MNT4P53745 580 aa3.41□□□□□ -1.86
LSM6YDR378C ATC1Q04005 294 aa3.41□□□□□ -1.86
LSM6YDR378C YDR114CQ04597 100 aa3.41□□□□□ -1.86
LSM6YDR378C ARV1Q06541 321 aa3.41□□□□□ -1.86
LSM6YDR378C ATG5Q12380 294 aa3.41□□□□□ -1.86
LSM6YDR378C MRP1P10662 321 aaKnown RBP3.4□□□□□ -1.87
LSM6YDR378C TRM7P38238 310 aaKnown RBP3.4□□□□□ -1.87
LSM6YDR378C ATG12P38316 186 aa3.4□□□□□ -1.87
LSM6YDR378C SMC2P38989 1170 aaKnown RBP3.4□□□□□ -1.87
LSM6YDR378C NPT1P39683 429 aaKnown RBP3.4□□□□□ -1.87
LSM6YDR378C SCC4P40090 624 aa3.4□□□□□ -1.87
LSM6YDR378C YJL118WP47022 219 aa3.4□□□□□ -1.87
LSM6YDR378C FMP41P53889 259 aaKnown RBP3.4□□□□□ -1.87
LSM6YDR378C ALG11P53954 548 aaKnown RBP3.4□□□□□ -1.87
LSM6YDR378C CDC14Q00684 551 aa3.4□□□□□ -1.87
LSM6YDR378C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
LSM6YDR378C PRR2Q12310 699 aa3.4□□□□□ -1.87
LSM6YDR378C YPR096CO13587 100 aa3.39□□□□□ -1.87
LSM6YDR378C RPL4AP10664 362 aaKnown RBP3.39□□□□□ -1.87
LSM6YDR378C DDI1P40087 428 aa3.39□□□□□ -1.87
LSM6YDR378C RPL4BP49626 362 aaKnown RBP3.39□□□□□ -1.87
LSM6YDR378C MIG2P53035 382 aa3.39□□□□□ -1.87
LSM6YDR378C ALG9P53868 555 aaKnown RBP3.39□□□□□ -1.87
LSM6YDR378C SDC1Q03323 175 aa3.39□□□□□ -1.87
LSM6YDR378C COX2P00410 251 aa3.38□□□□□ -1.87
LSM6YDR378C RPP0P05317 312 aaKnown RBP3.38□□□□□ -1.87
LSM6YDR378C DAL82P21705 255 aa3.38□□□□□ -1.87
LSM6YDR378C YUH1P35127 236 aa3.38□□□□□ -1.87
LSM6YDR378C SPL2P38839 148 aa3.38□□□□□ -1.87
LSM6YDR378C PRM9P39551 298 aa3.38□□□□□ -1.87
LSM6YDR378C SER33P40510 469 aa3.38□□□□□ -1.87
LSM6YDR378C HSH155P49955 971 aaKnown RBP3.38□□□□□ -1.87
LSM6YDR378C OST6Q03723 332 aa3.38□□□□□ -1.87
LSM6YDR378C COX20Q04935 205 aa3.38□□□□□ -1.87
LSM6YDR378C LOA1Q06508 300 aa3.38□□□□□ -1.87
LSM6YDR378C BTS1Q12051 335 aa3.38□□□□□ -1.87
LSM6YDR378C SME1Q12330 94 aaPredicted RBP3.38□□□□□ -1.87
LSM6YDR378C SUR2P38992 349 aa3.37□□□□□ -1.87
LSM6YDR378C SPO73P40031 143 aa3.37□□□□□ -1.87
LSM6YDR378C YJR012CP47087 207 aa3.37□□□□□ -1.87
LSM6YDR378C YNL095CP53932 642 aa3.37□□□□□ -1.87
LSM6YDR378C RLP24Q07915 199 aaKnown RBP3.37□□□□□ -1.87
LSM6YDR378C YEL009C-AA0A023PZF2 135 aa3.36□□□□□ -1.87
LSM6YDR378C POL30P15873 258 aaKnown RBP3.36□□□□□ -1.87
LSM6YDR378C HMT1P38074 348 aa3.36□□□□□ -1.87
LSM6YDR378C RPL10P41805 221 aaKnown RBP3.36□□□□□ -1.87
LSM6YDR378C ADH6Q04894 360 aaKnown RBP3.36□□□□□ -1.87
LSM6YDR378C RFM1Q12192 310 aa3.36□□□□□ -1.87
LSM6YDR378C TIM22Q12328 207 aa3.36□□□□□ -1.87
LSM6YDR378C AI5_BETAQ9ZZX0 354 aa3.36□□□□□ -1.87
LSM6YDR378C NUP157P40064 1391 aaKnown RBP3.36□□□□□ -1.87
LSM6YDR378C MET2P08465 486 aa3.35□□□□□ -1.87
LSM6YDR378C YAR1P46683 200 aa3.35□□□□□ -1.87
LSM6YDR378C YJL144WP47009 104 aa3.35□□□□□ -1.87
LSM6YDR378C NBP35P52920 328 aa3.35□□□□□ -1.87
LSM6YDR378C YGL088WP53151 121 aa3.35□□□□□ -1.87
LSM6YDR378C SLX9P53251 210 aaPredicted RBP3.35□□□□□ -1.87
LSM6YDR378C SWS2P53937 143 aa3.35□□□□□ -1.87
LSM6YDR378C YOL107WQ12239 342 aa3.35□□□□□ -1.87
LSM6YDR378C ISD11Q6Q560 94 aa3.35□□□□□ -1.87
LSM6YDR378C STH1P32597 1359 aa3.35□□□□□ -1.87
LSM6YDR378C INO80P53115 1489 aa3.35□□□□□ -1.87
LSM6YDR378C RSR1P13856 272 aa3.34□□□□□ -1.87
LSM6YDR378C CSG2P35206 410 aa3.34□□□□□ -1.87
LSM6YDR378C HEK2P38199 381 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
LSM6YDR378C MAL13P53338 473 aa3.34□□□□□ -1.87
LSM6YDR378C YPL039WQ03080 316 aa3.34□□□□□ -1.87
LSM6YDR378C PEX10Q05568 337 aa3.34□□□□□ -1.87
LSM6YDR378C RRT8Q08219 342 aa3.34□□□□□ -1.87
LSM6YDR378C ZWF1P11412 505 aaKnown RBP3.33□□□□□ -1.88
LSM6YDR378C RRT12P25381 491 aa3.33□□□□□ -1.88
LSM6YDR378C CAB3P36076 571 aa3.33□□□□□ -1.88
LSM6YDR378C ARN2P38724 620 aa3.33□□□□□ -1.88
LSM6YDR378C PAN1P32521 1480 aa3.33□□□□□ -1.88
LSM6YDR378C MSF1P08425 469 aa3.32□□□□□ -1.88
LSM6YDR378C VPS3P23643 1011 aa3.32□□□□□ -1.88
LSM6YDR378C RSA4P25382 515 aaKnown RBP3.32□□□□□ -1.88
LSM6YDR378C BMH1P29311 267 aaKnown RBP3.32□□□□□ -1.88
LSM6YDR378C PRS2P38620 318 aaKnown RBP3.32□□□□□ -1.88
LSM6YDR378C OST3P48439 350 aa3.32□□□□□ -1.88
LSM6YDR378C EBS1Q03466 884 aaKnown RBP3.32□□□□□ -1.88
LSM6YDR378C YDR209CQ03480 137 aa3.32□□□□□ -1.88
LSM6YDR378C CTS2Q06350 511 aa3.32□□□□□ -1.88
LSM6YDR378C MIG1P27705 504 aa3.31□□□□□ -1.88
LSM6YDR378C YHL049CP38722 271 aa3.31□□□□□ -1.88
LSM6YDR378C NIF3P53081 288 aa3.31□□□□□ -1.88
LSM6YDR378C YOL019WQ08157 551 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms