RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeast

Gene SSS1, Length 243 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSS1	YDR086C	SAS5	Q99314	248 aa		0.46	□□□□□ -2.34
SSS1	YDR086C	CYR1	P08678	2026 aa	Known RBP	0.46	□□□□□ -2.34
SSS1	YDR086C	MDH2	P22133	377 aa		0.45	□□□□□ -2.34
SSS1	YDR086C	SUA5	P32579	426 aa		0.45	□□□□□ -2.34
SSS1	YDR086C	RXT2	P38255	430 aa		0.45	□□□□□ -2.34
SSS1	YDR086C	YBR220C	P38318	560 aa		0.45	□□□□□ -2.34
SSS1	YDR086C	VTC1	P40046	129 aa	RIP-Chip data	0.45	□□□□□ -2.34	not detected
SSS1	YDR086C	GDS1	P41913	522 aa		0.45	□□□□□ -2.34
SSS1	YDR086C	DBP9	Q06218	594 aa	Known RBP	0.45	□□□□□ -2.34
SSS1	YDR086C	SAM4	Q08985	325 aa	Known RBP	0.45	□□□□□ -2.34
SSS1	YDR086C	RPL18A	P0CX49	186 aa	Known RBP	0.44	□□□□□ -2.34
SSS1	YDR086C	RPL18B	P0CX50	186 aa	Known RBP	0.44	□□□□□ -2.34
SSS1	YDR086C	RNP1	P32385	249 aa		0.44	□□□□□ -2.34
SSS1	YDR086C	DOG1	P38774	246 aa		0.44	□□□□□ -2.34
SSS1	YDR086C	AAH1	P53909	347 aa		0.44	□□□□□ -2.34
SSS1	YDR086C	YMR209C	Q03648	457 aa		0.44	□□□□□ -2.34
SSS1	YDR086C	DPP1	Q05521	289 aa		0.44	□□□□□ -2.34
SSS1	YDR086C	FRE6	Q12473	712 aa		0.44	□□□□□ -2.34
SSS1	YDR086C	YMR316C-A	I2HB70	103 aa		0.43	□□□□□ -2.34
SSS1	YDR086C	POX1	P13711	748 aa		0.43	□□□□□ -2.34
SSS1	YDR086C	FPR1	P20081	114 aa	Known RBP	0.43	□□□□□ -2.34
SSS1	YDR086C	SCL1	P21243	252 aa	Known RBP	0.43	□□□□□ -2.34
SSS1	YDR086C	PEX4	P29340	183 aa		0.43	□□□□□ -2.34
SSS1	YDR086C	CAM1	P29547	415 aa	Known RBP	0.43	□□□□□ -2.34
SSS1	YDR086C	RPS0A	P32905	252 aa	Known RBP	0.43	□□□□□ -2.34
SSS1	YDR086C	YKL162C	P36052	402 aa		0.43	□□□□□ -2.34
SSS1	YDR086C	HMT1	P38074	348 aa		0.43	□□□□□ -2.34
SSS1	YDR086C	ARN2	P38724	620 aa		0.43	□□□□□ -2.34
SSS1	YDR086C	LIN1	P38852	340 aa	Predicted RBP	0.43	□□□□□ -2.34
SSS1	YDR086C	AGX1	P43567	385 aa		0.43	□□□□□ -2.34
SSS1	YDR086C	ERG25	P53045	309 aa		0.43	□□□□□ -2.34
SSS1	YDR086C	NIF3	P53081	288 aa		0.43	□□□□□ -2.34
SSS1	YDR086C	TAF9	Q05027	157 aa		0.43	□□□□□ -2.34
SSS1	YDR086C	APC9	Q12107	265 aa		0.43	□□□□□ -2.34
SSS1	YDR086C	YOR114W	Q12219	294 aa		0.43	□□□□□ -2.34
SSS1	YDR086C	GEP5	Q12393	293 aa		0.43	□□□□□ -2.34
SSS1	YDR086C	GAL3	P13045	520 aa		0.42	□□□□□ -2.34
SSS1	YDR086C	MSS116	P15424	664 aa	Known RBP	0.42	□□□□□ -2.34
SSS1	YDR086C	GLE2	P40066	365 aa		0.42	□□□□□ -2.34
SSS1	YDR086C	BMT5	P40493	336 aa		0.42	□□□□□ -2.34
SSS1	YDR086C	COX16	P47081	118 aa		0.42	□□□□□ -2.34
SSS1	YDR086C	CUE3	P53137	624 aa	Known RBP	0.42	□□□□□ -2.34
SSS1	YDR086C	YPL077C	Q02831	240 aa		0.42	□□□□□ -2.34
SSS1	YDR086C	VPS60	Q03390	229 aa		0.42	□□□□□ -2.34
SSS1	YDR086C	TAZ1	Q06510	381 aa		0.42	□□□□□ -2.34
SSS1	YDR086C	PBP4	Q07362	185 aa	Known RBP	0.42	□□□□□ -2.34
SSS1	YDR086C	RAS2	P01120	322 aa	Known RBP	0.41	□□□□□ -2.34
SSS1	YDR086C	RPS3	P05750	240 aa	Known RBP	0.41	□□□□□ -2.34
SSS1	YDR086C	DSF1	P0CX08	502 aa		0.41	□□□□□ -2.34
SSS1	YDR086C	YNR073C	P0CX09	502 aa		0.41	□□□□□ -2.34
SSS1	YDR086C	VMA2	P16140	517 aa	Known RBP	0.41	□□□□□ -2.34
SSS1	YDR086C	YKL063C	P35725	167 aa		0.41	□□□□□ -2.34
SSS1	YDR086C	SWD2	P36104	329 aa	Predicted RBP	0.41	□□□□□ -2.34
SSS1	YDR086C	RPC37	P36121	282 aa		0.41	□□□□□ -2.34
SSS1	YDR086C	OST2	P46964	130 aa		0.41	□□□□□ -2.34
SSS1	YDR086C	FMP41	P53889	259 aa	Known RBP	0.41	□□□□□ -2.34
SSS1	YDR086C	TRM44	Q02648	567 aa	Known RBP	0.41	□□□□□ -2.34
SSS1	YDR086C	SDC1	Q03323	175 aa		0.41	□□□□□ -2.34
SSS1	YDR086C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.41	□□□□□ -2.34	not detected
SSS1	YDR086C	RIO1	Q12196	484 aa	Known RBP	0.41	□□□□□ -2.34
SSS1	YDR086C	PST1	Q12355	444 aa		0.41	□□□□□ -2.34
SSS1	YDR086C	YER188C-A	P0C0V2	99 aa		0.4	□□□□□ -2.35
SSS1	YDR086C	SPT4	P32914	102 aa	Predicted RBP	0.4	□□□□□ -2.35
SSS1	YDR086C	KDX1	P36005	433 aa		0.4	□□□□□ -2.35
SSS1	YDR086C	LAS1	P36146	502 aa	Predicted RBP	0.4	□□□□□ -2.35
SSS1	YDR086C	SHC1	P39000	512 aa		0.4	□□□□□ -2.35
SSS1	YDR086C	NPT1	P39683	429 aa	Known RBP	0.4	□□□□□ -2.35
SSS1	YDR086C	AVT2	P39981	480 aa		0.4	□□□□□ -2.35
SSS1	YDR086C	YJL028W	P47062	111 aa		0.4	□□□□□ -2.35
SSS1	YDR086C	GTO1	P48239	356 aa		0.4	□□□□□ -2.35
SSS1	YDR086C	MDM34	P53083	459 aa		0.4	□□□□□ -2.35
SSS1	YDR086C	DBP6	P53734	629 aa	Known RBP	0.4	□□□□□ -2.35
SSS1	YDR086C	BUD25	P85052	153 aa		0.4	□□□□□ -2.35
SSS1	YDR086C	PEX10	Q05568	337 aa		0.4	□□□□□ -2.35
SSS1	YDR086C	PET494	P07390	489 aa	Predicted RBP	0.39	□□□□□ -2.35
SSS1	YDR086C	COS2	P0CX12	379 aa		0.39	□□□□□ -2.35
SSS1	YDR086C	COS3	P0CX13	379 aa		0.39	□□□□□ -2.35
SSS1	YDR086C	RPL2A	P0CX45	254 aa	Known RBP	0.39	□□□□□ -2.35
SSS1	YDR086C	RPL2B	P0CX46	254 aa	Known RBP	0.39	□□□□□ -2.35
SSS1	YDR086C	RPL5	P26321	297 aa	Known RBP	0.39	□□□□□ -2.35
SSS1	YDR086C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.39	□□□□□ -2.35	not detected
SSS1	YDR086C	MAL32	P38158	584 aa		0.39	□□□□□ -2.35
SSS1	YDR086C	SIF2	P38262	535 aa		0.39	□□□□□ -2.35
SSS1	YDR086C	YBR219C	P38317	127 aa		0.39	□□□□□ -2.35
SSS1	YDR086C	RPL13B	P40212	199 aa	Known RBP	0.39	□□□□□ -2.35
SSS1	YDR086C	YIA6	P40556	373 aa		0.39	□□□□□ -2.35
SSS1	YDR086C	PRM10	P42946	383 aa		0.39	□□□□□ -2.35
SSS1	YDR086C	YJR079W	P47126	109 aa		0.39	□□□□□ -2.35
SSS1	YDR086C	MAL12	P53341	584 aa		0.39	□□□□□ -2.35
SSS1	YDR086C	PDR16	P53860	351 aa	Known RBP	0.39	□□□□□ -2.35
SSS1	YDR086C	YNL050C	P53952	270 aa		0.39	□□□□□ -2.35
SSS1	YDR086C	MRPS8	Q03799	155 aa		0.39	□□□□□ -2.35
SSS1	YDR086C	BOP2	Q06150	570 aa		0.39	□□□□□ -2.35
SSS1	YDR086C	PML1	Q07930	204 aa	Predicted RBP	0.39	□□□□□ -2.35
SSS1	YDR086C	RPL13A	Q12690	199 aa	Predicted RBP	0.39	□□□□□ -2.35
SSS1	YDR086C	YAL064W-B	O13512	126 aa		0.38	□□□□□ -2.35
SSS1	YDR086C	ATP6	P00854	259 aa		0.38	□□□□□ -2.35
SSS1	YDR086C	VAR1	P02381	398 aa		0.38	□□□□□ -2.35
SSS1	YDR086C	DDI2	P0CH63	225 aa		0.38	□□□□□ -2.35
SSS1	YDR086C	DDI3	P0CH64	225 aa		0.38	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 163.1 ms