RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W PFA5Q03289 374 aa5.14□□□□□ -1.59
VMS1YDR049W FRQ1Q06389 190 aa5.14□□□□□ -1.59
VMS1YDR049W TPO4Q12256 659 aa5.14□□□□□ -1.59
VMS1YDR049W FOL3Q12676 427 aaPredicted RBP5.14□□□□□ -1.59
VMS1YDR049W BCY1P07278 416 aaKnown RBP5.13□□□□□ -1.59
VMS1YDR049W EXO70P19658 623 aa5.13□□□□□ -1.59
VMS1YDR049W GSP1P32835 219 aaKnown RBP5.13□□□□□ -1.59
VMS1YDR049W GSP2P32836 220 aaKnown RBP5.13□□□□□ -1.59
VMS1YDR049W YIA6P40556 373 aa5.13□□□□□ -1.59
VMS1YDR049W YMR166CQ03829 368 aa5.13□□□□□ -1.59
VMS1YDR049W TPO3Q06451 622 aa5.13□□□□□ -1.59
VMS1YDR049W SSK1Q07084 712 aa5.13□□□□□ -1.59
VMS1YDR049W YKL033W-AQ86ZR7 236 aa5.13□□□□□ -1.59
VMS1YDR049W MEX67Q99257 599 aaKnown RBP5.13□□□□□ -1.59
VMS1YDR049W YRF1-1P0CX20 1796 aa5.13□□□□□ -1.59
VMS1YDR049W YRF1-5P0CX21 1796 aa5.13□□□□□ -1.59
VMS1YDR049W YRF1-8P0CX22 1796 aa5.13□□□□□ -1.59
VMS1YDR049W SUC2P00724 532 aa5.13□□□□□ -1.59
VMS1YDR049W CTA1P15202 515 aa5.13□□□□□ -1.59
VMS1YDR049W CLB2P24869 491 aa5.13□□□□□ -1.59
VMS1YDR049W RRG9P40156 214 aa5.13□□□□□ -1.59
VMS1YDR049W KEG1P43614 200 aa5.13□□□□□ -1.59
VMS1YDR049W HMS2P47175 358 aa5.13□□□□□ -1.59
VMS1YDR049W TRM9P49957 279 aa5.13□□□□□ -1.59
VMS1YDR049W CDH1P53197 566 aa5.13□□□□□ -1.59
VMS1YDR049W MPA43P53583 542 aaPredicted RBP5.13□□□□□ -1.59
VMS1YDR049W AAT1Q01802 451 aa5.13□□□□□ -1.59
VMS1YDR049W RUB1Q03919 77 aa5.13□□□□□ -1.59
VMS1YDR049W YDL009CQ12210 107 aa5.13□□□□□ -1.59
VMS1YDR049W DET1Q99288 334 aaKnown RBP5.13□□□□□ -1.59
VMS1YDR049W CDC28P00546 298 aaKnown RBP5.12□□□□□ -1.59
VMS1YDR049W MRP2P10663 115 aaPredicted RBP5.12□□□□□ -1.59
VMS1YDR049W MCK1P21965 375 aaKnown RBP5.12□□□□□ -1.59
VMS1YDR049W PPH21P23594 369 aa5.12□□□□□ -1.59
VMS1YDR049W IFM1P25038 676 aa5.12□□□□□ -1.59
VMS1YDR049W THI80P35202 319 aa5.12□□□□□ -1.59
VMS1YDR049W YKL075CP36083 450 aa5.12□□□□□ -1.59
VMS1YDR049W FMP23P38231 175 aa5.12□□□□□ -1.59
VMS1YDR049W YBR096WP38256 230 aa5.12□□□□□ -1.59
VMS1YDR049W EFM1P38732 585 aa5.12□□□□□ -1.59
VMS1YDR049W PKR1Q03880 122 aaKnown RBP5.12□□□□□ -1.59
VMS1YDR049W SFH1Q06168 426 aa5.12□□□□□ -1.59
VMS1YDR049W YOP1Q12402 180 aa5.12□□□□□ -1.59
VMS1YDR049W YOL163WP0CF20 169 aa5.11□□□□□ -1.59
VMS1YDR049W STE4P18851 423 aa5.11□□□□□ -1.59
VMS1YDR049W TAH1P25638 111 aaPredicted RBP5.11□□□□□ -1.59
VMS1YDR049W SUA7P29055 345 aaPredicted RBP5.11□□□□□ -1.59
VMS1YDR049W LST4P34239 828 aa5.11□□□□□ -1.59
VMS1YDR049W MRPL28P36527 147 aa5.11□□□□□ -1.59
VMS1YDR049W YBR056WP38081 501 aa5.11□□□□□ -1.59
VMS1YDR049W RGI1P40043 161 aaPredicted RBP5.11□□□□□ -1.59
VMS1YDR049W GAT1P43574 510 aa5.11□□□□□ -1.59
VMS1YDR049W JJJ3P47138 172 aa5.11□□□□□ -1.59
VMS1YDR049W IMD3P50095 523 aaKnown RBP5.11□□□□□ -1.59
VMS1YDR049W MNN10P50108 393 aaKnown RBP5.11□□□□□ -1.59
VMS1YDR049W MRM2P53123 320 aa5.11□□□□□ -1.59
VMS1YDR049W SWC4P53201 476 aa5.11□□□□□ -1.59
VMS1YDR049W SMM1P53720 384 aaKnown RBP5.11□□□□□ -1.59
VMS1YDR049W PDR17P53844 350 aa5.11□□□□□ -1.59
VMS1YDR049W STP1Q00947 519 aa5.11□□□□□ -1.59
VMS1YDR049W INM2Q05533 292 aa5.11□□□□□ -1.59
VMS1YDR049W FYV7Q12247 151 aa5.11□□□□□ -1.59
VMS1YDR049W MMS1Q06211 1407 aa5.11□□□□□ -1.59
VMS1YDR049W YOR304C-AO14468 76 aa5.11□□□□□ -1.59
VMS1YDR049W BAR1P12630 587 aa5.11□□□□□ -1.59
VMS1YDR049W TFS1P14306 219 aa5.11□□□□□ -1.59
VMS1YDR049W GLN3P18494 730 aa5.11□□□□□ -1.59
VMS1YDR049W YCR023CP25351 611 aa5.11□□□□□ -1.59
VMS1YDR049W SPC34P36131 295 aa5.11□□□□□ -1.59
VMS1YDR049W TVP38P36164 337 aa5.11□□□□□ -1.59
VMS1YDR049W YBR053CP38235 358 aa5.11□□□□□ -1.59
VMS1YDR049W IPI1P38803 334 aaPredicted RBP5.11□□□□□ -1.59
VMS1YDR049W FCY21P40039 528 aa5.11□□□□□ -1.59
VMS1YDR049W FAU1P40099 211 aa5.11□□□□□ -1.59
VMS1YDR049W YER186CP40101 306 aa5.11□□□□□ -1.59
VMS1YDR049W AIM23P47015 356 aa5.11□□□□□ -1.59
VMS1YDR049W PCP1P53259 346 aa5.11□□□□□ -1.59
VMS1YDR049W ERG5P54781 538 aa5.11□□□□□ -1.59
VMS1YDR049W MAK3Q03503 176 aa5.11□□□□□ -1.59
VMS1YDR049W TRS23Q03784 219 aa5.11□□□□□ -1.59
VMS1YDR049W TDA6Q06466 467 aa5.11□□□□□ -1.59
VMS1YDR049W LDB18Q07887 179 aa5.11□□□□□ -1.59
VMS1YDR049W TAF10Q12030 206 aa5.11□□□□□ -1.59
VMS1YDR049W RPS2P25443 254 aaKnown RBP5.1□□□□□ -1.59
VMS1YDR049W BUB2P26448 306 aaPredicted RBP5.1□□□□□ -1.59
VMS1YDR049W RPL16BP26785 198 aaKnown RBP5.1□□□□□ -1.59
VMS1YDR049W MCR1P36060 302 aaKnown RBP5.1□□□□□ -1.59
VMS1YDR049W APL3P38065 1025 aa5.1□□□□□ -1.59
VMS1YDR049W ROT2P38138 954 aa5.1□□□□□ -1.59
VMS1YDR049W TRM7P38238 310 aaKnown RBP5.1□□□□□ -1.59
VMS1YDR049W MTC4P38335 694 aaKnown RBP5.1□□□□□ -1.59
VMS1YDR049W YGR151CP53287 111 aa5.1□□□□□ -1.59
VMS1YDR049W YNL040WP53960 456 aaPredicted RBP5.1□□□□□ -1.59
VMS1YDR049W SWP1Q02795 286 aa5.1□□□□□ -1.59
VMS1YDR049W RRS1Q08746 203 aaKnown RBP5.1□□□□□ -1.59
VMS1YDR049W RAX2Q12465 1220 aa5.1□□□□□ -1.59
VMS1YDR049W NUP1P20676 1076 aa5.09□□□□□ -1.59
VMS1YDR049W EPT1P22140 391 aa5.09□□□□□ -1.59
VMS1YDR049W ARO7P32178 256 aa5.09□□□□□ -1.59
VMS1YDR049W UTR4P32626 227 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms