RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C YOS9Q99220 542 aa2.24□□□□□ -2.05
SRD1YCR018C XRN1P22147 1528 aaKnown RBP2.23□□□□□ -2.05
SRD1YCR018C RAD3P06839 778 aa2.23□□□□□ -2.05
SRD1YCR018C PHO80P20052 293 aa2.23□□□□□ -2.05
SRD1YCR018C ALK2P32789 676 aaPredicted RBP2.23□□□□□ -2.05
SRD1YCR018C AST1P35183 429 aa2.23□□□□□ -2.05
SRD1YCR018C POP8P38208 133 aa2.23□□□□□ -2.05
SRD1YCR018C ATG12P38316 186 aa2.23□□□□□ -2.05
SRD1YCR018C NPT1P39683 429 aaKnown RBP2.23□□□□□ -2.05
SRD1YCR018C YIL059CP40520 121 aa2.23□□□□□ -2.05
SRD1YCR018C SYS1P41544 203 aa2.23□□□□□ -2.05
SRD1YCR018C RPL10P41805 221 aaKnown RBP2.23□□□□□ -2.05
SRD1YCR018C BNA6P43619 295 aa2.23□□□□□ -2.05
SRD1YCR018C RPE1P46969 238 aa2.23□□□□□ -2.05
SRD1YCR018C RSM27P53305 110 aa2.23□□□□□ -2.05
SRD1YCR018C MNT4P53745 580 aa2.23□□□□□ -2.05
SRD1YCR018C YDR209CQ03480 137 aa2.23□□□□□ -2.05
SRD1YCR018C YLR173WQ06247 608 aa2.23□□□□□ -2.05
SRD1YCR018C YDL144CQ07589 356 aa2.23□□□□□ -2.05
SRD1YCR018C SSN2P38931 1420 aa2.23□□□□□ -2.05
SRD1YCR018C BUD4P47136 1447 aa2.23□□□□□ -2.05
SRD1YCR018C RRT12P25381 491 aa2.22□□□□□ -2.05
SRD1YCR018C ATG15P25641 520 aa2.22□□□□□ -2.05
SRD1YCR018C YAR1P46683 200 aa2.22□□□□□ -2.05
SRD1YCR018C ZRG17P53735 605 aa2.22□□□□□ -2.05
SRD1YCR018C CDC14Q00684 551 aa2.22□□□□□ -2.05
SRD1YCR018C YPL264CQ08980 353 aa2.22□□□□□ -2.05
SRD1YCR018C MDS3P53094 1487 aa2.21□□□□□ -2.06
SRD1YCR018C MSF1P08425 469 aa2.21□□□□□ -2.06
SRD1YCR018C RPL4AP10664 362 aaKnown RBP2.21□□□□□ -2.06
SRD1YCR018C YAK1P14680 807 aa2.21□□□□□ -2.06
SRD1YCR018C TAF2P23255 1407 aa2.21□□□□□ -2.06
SRD1YCR018C CWP1P28319 239 aa2.21□□□□□ -2.06
SRD1YCR018C ERG2P32352 222 aa2.21□□□□□ -2.06
SRD1YCR018C ARO4P32449 370 aaKnown RBP2.21□□□□□ -2.06
SRD1YCR018C YHL044WP38727 235 aa2.21□□□□□ -2.06
SRD1YCR018C BIG1P38813 335 aa2.21□□□□□ -2.06
SRD1YCR018C SPT8P38915 602 aa2.21□□□□□ -2.06
SRD1YCR018C ECO1P43605 281 aa2.21□□□□□ -2.06
SRD1YCR018C RPL4BP49626 362 aaKnown RBP2.21□□□□□ -2.06
SRD1YCR018C UFD1P53044 361 aa2.21□□□□□ -2.06
SRD1YCR018C MRPL50P53724 139 aa2.21□□□□□ -2.06
SRD1YCR018C YNL134CP53912 376 aaKnown RBP2.21□□□□□ -2.06
SRD1YCR018C PEX10Q05568 337 aa2.21□□□□□ -2.06
SRD1YCR018C SME1Q12330 94 aaPredicted RBP2.21□□□□□ -2.06
SRD1YCR018C STH1P32597 1359 aa2.21□□□□□ -2.06
SRD1YCR018C THO2P53552 1597 aaKnown RBP2.2□□□□□ -2.06
SRD1YCR018C RPP0P05317 312 aaKnown RBP2.2□□□□□ -2.06
SRD1YCR018C CDC42P19073 191 aa2.2□□□□□ -2.06
SRD1YCR018C VPS3P23643 1011 aa2.2□□□□□ -2.06
SRD1YCR018C PRE7P23724 241 aaKnown RBP2.2□□□□□ -2.06
SRD1YCR018C RPT5P33297 434 aaKnown RBP2.2□□□□□ -2.06
SRD1YCR018C YBL081WP38180 368 aaKnown RBP2.2□□□□□ -2.06
SRD1YCR018C HEK2P38199 381 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
SRD1YCR018C PRS2P38620 318 aaKnown RBP2.2□□□□□ -2.06
SRD1YCR018C YHI9P38765 294 aa2.2□□□□□ -2.06
SRD1YCR018C YHR045WP38775 560 aa2.2□□□□□ -2.06
SRD1YCR018C SER33P40510 469 aa2.2□□□□□ -2.06
SRD1YCR018C PFS2P42841 465 aaKnown RBP2.2□□□□□ -2.06
SRD1YCR018C COS4P43542 379 aa2.2□□□□□ -2.06
SRD1YCR018C LIA1P47120 325 aaKnown RBP2.2□□□□□ -2.06
SRD1YCR018C NBP1P52919 319 aaPredicted RBP2.2□□□□□ -2.06
SRD1YCR018C SLX9P53251 210 aaPredicted RBP2.2□□□□□ -2.06
SRD1YCR018C MAL13P53338 473 aa2.2□□□□□ -2.06
SRD1YCR018C FMP41P53889 259 aaKnown RBP2.2□□□□□ -2.06
SRD1YCR018C OSH6Q02201 448 aa2.2□□□□□ -2.06
SRD1YCR018C SDC1Q03323 175 aa2.2□□□□□ -2.06
SRD1YCR018C EBS1Q03466 884 aaKnown RBP2.2□□□□□ -2.06
SRD1YCR018C YPR195CQ06594 109 aa2.2□□□□□ -2.06
SRD1YCR018C SDO1Q07953 250 aaKnown RBP2.2□□□□□ -2.06
SRD1YCR018C YPR063CQ12160 140 aa2.2□□□□□ -2.06
SRD1YCR018C YPL119C-AQ3E751 87 aa2.2□□□□□ -2.06
SRD1YCR018C AI5_BETAQ9ZZX0 354 aa2.2□□□□□ -2.06
SRD1YCR018C CCH1P50077 2039 aa2.19□□□□□ -2.06
SRD1YCR018C YEL009C-AA0A023PZF2 135 aa2.19□□□□□ -2.06
SRD1YCR018C QRI5P32344 111 aa2.19□□□□□ -2.06
SRD1YCR018C PRS4P38063 326 aaPredicted RBP2.19□□□□□ -2.06
SRD1YCR018C MED8P38304 223 aa2.19□□□□□ -2.06
SRD1YCR018C BUD13P46947 266 aaPredicted RBP2.19□□□□□ -2.06
SRD1YCR018C YNL095CP53932 642 aa2.19□□□□□ -2.06
SRD1YCR018C TVP15Q03860 143 aa2.19□□□□□ -2.06
SRD1YCR018C YOR029WQ12243 111 aa2.19□□□□□ -2.06
SRD1YCR018C REV3P14284 1504 aa2.18□□□□□ -2.06
SRD1YCR018C YOL163WP0CF20 169 aa2.18□□□□□ -2.06
SRD1YCR018C RNA15P25299 296 aaPredicted RBP2.18□□□□□ -2.06
SRD1YCR018C TKL2P33315 681 aa2.18□□□□□ -2.06
SRD1YCR018C PRY2P36110 329 aa2.18□□□□□ -2.06
SRD1YCR018C FMC1P40491 155 aa2.18□□□□□ -2.06
SRD1YCR018C YFR045WP43617 309 aa2.18□□□□□ -2.06
SRD1YCR018C NUP84P52891 726 aa2.18□□□□□ -2.06
SRD1YCR018C NBP35P52920 328 aa2.18□□□□□ -2.06
SRD1YCR018C SWS2P53937 143 aa2.18□□□□□ -2.06
SRD1YCR018C ASI3P53983 676 aa2.18□□□□□ -2.06
SRD1YCR018C PET117Q02771 107 aa2.18□□□□□ -2.06
SRD1YCR018C PAM18Q07914 168 aa2.18□□□□□ -2.06
SRD1YCR018C SGT2Q12118 346 aaKnown RBP2.18□□□□□ -2.06
SRD1YCR018C ATG5Q12380 294 aa2.18□□□□□ -2.06
SRD1YCR018C PRM7Q12459 698 aa2.18□□□□□ -2.06
SRD1YCR018C NUP157P40064 1391 aaKnown RBP2.18□□□□□ -2.06
SRD1YCR018C PEP1P32319 1579 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 129.7 ms