RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeastyeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIF2YBR103W TRM12Q04235 462 aa4.55□□□□□ -1.68
SIF2YBR103W SSK1Q07084 712 aa4.55□□□□□ -1.68
SIF2YBR103W YOR365CQ08844 703 aa4.55□□□□□ -1.68
SIF2YBR103W YGK3Q12222 375 aaPredicted RBP4.55□□□□□ -1.68
SIF2YBR103W VAM3Q12241 283 aa4.55□□□□□ -1.68
SIF2YBR103W TY2A-BQ12260 438 aa4.55□□□□□ -1.68
SIF2YBR103W YLR126CQ12288 251 aa4.55□□□□□ -1.68
SIF2YBR103W TY2A-OR2Q12293 438 aa4.55□□□□□ -1.68
SIF2YBR103W TY2A-DR1Q12392 438 aa4.55□□□□□ -1.68
SIF2YBR103W ISA2Q12425 185 aa4.55□□□□□ -1.68
SIF2YBR103W TY2A-OR1Q12439 438 aa4.55□□□□□ -1.68
SIF2YBR103W RTN2Q12443 393 aa4.55□□□□□ -1.68
SIF2YBR103W COA6Q3E846 104 aa4.55□□□□□ -1.68
SIF2YBR103W TY2A-DR3Q99303 438 aa4.55□□□□□ -1.68
SIF2YBR103W GAL4P04386 881 aa4.54□□□□□ -1.68
SIF2YBR103W ATP5P09457 212 aa4.54□□□□□ -1.68
SIF2YBR103W NAM2P11325 894 aa4.54□□□□□ -1.68
SIF2YBR103W PHO80P20052 293 aa4.54□□□□□ -1.68
SIF2YBR103W PRE7P23724 241 aaKnown RBP4.54□□□□□ -1.68
SIF2YBR103W SNC1P31109 117 aa4.54□□□□□ -1.68
SIF2YBR103W SNU114P36048 1008 aaKnown RBP4.54□□□□□ -1.68
SIF2YBR103W YKL162CP36052 402 aa4.54□□□□□ -1.68
SIF2YBR103W HAT2P39984 401 aa4.54□□□□□ -1.68
SIF2YBR103W POG1P40473 351 aa4.54□□□□□ -1.68
SIF2YBR103W YAR1P46683 200 aa4.54□□□□□ -1.68
SIF2YBR103W YJR154WP47181 346 aa4.54□□□□□ -1.68
SIF2YBR103W YGR168CP53293 376 aa4.54□□□□□ -1.68
SIF2YBR103W RHO3Q00245 231 aaKnown RBP4.54□□□□□ -1.68
SIF2YBR103W CTK1Q03957 528 aaKnown RBP4.54□□□□□ -1.68
SIF2YBR103W EMI1Q04406 187 aa4.54□□□□□ -1.68
SIF2YBR103W YML096WQ04489 525 aa4.54□□□□□ -1.68
SIF2YBR103W TDA6Q06466 467 aa4.54□□□□□ -1.68
SIF2YBR103W SNA4Q07549 140 aa4.54□□□□□ -1.68
SIF2YBR103W MFG1Q07684 458 aa4.54□□□□□ -1.68
SIF2YBR103W AIM6Q07716 390 aa4.54□□□□□ -1.68
SIF2YBR103W ENT4Q07872 247 aa4.54□□□□□ -1.68
SIF2YBR103W SDO1Q07953 250 aaKnown RBP4.54□□□□□ -1.68
SIF2YBR103W PFK27Q12471 397 aaPredicted RBP4.54□□□□□ -1.68
SIF2YBR103W SKS1Q12505 502 aa4.54□□□□□ -1.68
SIF2YBR103W YDL085C-AQ3E7B7 68 aaKnown RBP4.54□□□□□ -1.68
SIF2YBR103W HXK2P04807 486 aaKnown RBP4.54□□□□□ -1.68
SIF2YBR103W ARG80P07249 177 aa4.54□□□□□ -1.68
SIF2YBR103W NHP6AP11632 93 aaKnown RBP4.54□□□□□ -1.68
SIF2YBR103W SNF6P18888 332 aa4.54□□□□□ -1.68
SIF2YBR103W PPH21P23594 369 aa4.54□□□□□ -1.68
SIF2YBR103W YCR099CP25657 155 aa4.54□□□□□ -1.68
SIF2YBR103W BUB3P26449 341 aa4.54□□□□□ -1.68
SIF2YBR103W TIP20P33891 701 aa4.54□□□□□ -1.68
SIF2YBR103W THI80P35202 319 aa4.54□□□□□ -1.68
SIF2YBR103W APL3P38065 1025 aa4.54□□□□□ -1.68
SIF2YBR103W EHT1P38295 451 aa4.54□□□□□ -1.68
SIF2YBR103W RPP1P38786 293 aa4.54□□□□□ -1.68
SIF2YBR103W PHO90P39535 881 aa4.54□□□□□ -1.68
SIF2YBR103W YAL037WP39728 267 aa4.54□□□□□ -1.68
SIF2YBR103W VRG4P40107 337 aa4.54□□□□□ -1.68
SIF2YBR103W LTP1P40347 161 aa4.54□□□□□ -1.68
SIF2YBR103W YJL068CP40363 299 aa4.54□□□□□ -1.68
SIF2YBR103W FMC1P40491 155 aa4.54□□□□□ -1.68
SIF2YBR103W GAT1P43574 510 aa4.54□□□□□ -1.68
SIF2YBR103W CIS3P47001 227 aa4.54□□□□□ -1.68
SIF2YBR103W YJR011CP47086 261 aaPredicted RBP4.54□□□□□ -1.68
SIF2YBR103W RPN14P53196 417 aa4.54□□□□□ -1.68
SIF2YBR103W CSL4P53859 292 aaPredicted RBP4.54□□□□□ -1.68
SIF2YBR103W YDR366CP87287 132 aa4.54□□□□□ -1.68
SIF2YBR103W APM1Q00776 475 aaPredicted RBP4.54□□□□□ -1.68
SIF2YBR103W DIG2Q03373 323 aaKnown RBP4.54□□□□□ -1.68
SIF2YBR103W YMR130WQ04223 302 aa4.54□□□□□ -1.68
SIF2YBR103W YHC1Q05900 231 aaKnown RBP4.54□□□□□ -1.68
SIF2YBR103W TMA10Q06177 86 aa4.54□□□□□ -1.68
SIF2YBR103W YLR179CQ06252 201 aaKnown RBP4.54□□□□□ -1.68
SIF2YBR103W MED7Q08278 222 aa4.54□□□□□ -1.68
SIF2YBR103W YDL176WQ12027 708 aa4.54□□□□□ -1.68
SIF2YBR103W NUS1Q12063 375 aa4.54□□□□□ -1.68
SIF2YBR103W SUL2Q12325 893 aa4.54□□□□□ -1.68
SIF2YBR103W PST2Q12335 198 aaKnown RBP4.54□□□□□ -1.68
SIF2YBR103W RKM5Q12367 367 aa4.54□□□□□ -1.68
SIF2YBR103W YDL199CQ12407 687 aa4.54□□□□□ -1.68
SIF2YBR103W THP2O13539 261 aaKnown RBP4.53□□□□□ -1.68
SIF2YBR103W RPL1AP0CX43 217 aaKnown RBP4.53□□□□□ -1.68
SIF2YBR103W RPL1BP0CX44 217 aaKnown RBP4.53□□□□□ -1.68
SIF2YBR103W SEC59P20048 519 aa4.53□□□□□ -1.68
SIF2YBR103W BUB2P26448 306 aaPredicted RBP4.53□□□□□ -1.68
SIF2YBR103W GAR1P28007 205 aaKnown RBP4.53□□□□□ -1.68
SIF2YBR103W FET3P38993 636 aa4.53□□□□□ -1.68
SIF2YBR103W YEL073CP39974 107 aa4.53□□□□□ -1.68
SIF2YBR103W FAU1P40099 211 aa4.53□□□□□ -1.68
SIF2YBR103W SSU1P41930 458 aa4.53□□□□□ -1.68
SIF2YBR103W AIM22P47051 409 aa4.53□□□□□ -1.68
SIF2YBR103W YGR250CP53316 781 aaKnown RBP4.53□□□□□ -1.68
SIF2YBR103W MPA43P53583 542 aaPredicted RBP4.53□□□□□ -1.68
SIF2YBR103W TEX1P53851 422 aaKnown RBP4.53□□□□□ -1.68
SIF2YBR103W CTL1Q03220 320 aaKnown RBP4.53□□□□□ -1.68
SIF2YBR103W TVP18Q04767 167 aa4.53□□□□□ -1.68
SIF2YBR103W HRP1Q99383 534 aaKnown RBP4.53□□□□□ -1.68
SIF2YBR103W MDM35O60200 86 aa4.52□□□□□ -1.69
SIF2YBR103W ADH2P00331 348 aaKnown RBP4.52□□□□□ -1.69
SIF2YBR103W RHO2P06781 192 aa4.52□□□□□ -1.69
SIF2YBR103W PEP4P07267 405 aaKnown RBP4.52□□□□□ -1.69
SIF2YBR103W HAP3P13434 144 aa4.52□□□□□ -1.69
SIF2YBR103W GCY1P14065 312 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms