RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 CACNA2D3Q8IZS8 1091 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 SAAL1Q96ER3 474 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 XPO6Q96QU8 1125 aaKnown RBP12.69□□□□□ -0.38
C11orf54-215ENST00000617482 NUP85Q9BW27 656 aa12.69□□□□□ -0.38
C11orf54-215ENST00000617482 ZNF70Q9UC06 446 aaPredicted RBP12.69□□□□□ -0.38
C11orf54-215ENST00000617482 NOCTQ9UK39 431 aaKnown RBP12.69□□□□□ -0.38
C11orf54-215ENST00000617482 SCAF8Q9UPN6 1271 aaKnown RBP12.69□□□□□ -0.38
C11orf54-215ENST00000617482 PFASO15067 1338 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 ANKRD63C9JTQ0 380 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 CALCAP01258 141 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 PAEPP09466 180 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 NUDT17P0C025 328 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 CHN1P15882 459 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 YWHABP31946 246 aaKnown RBP12.68□□□□□ -0.38
C11orf54-215ENST00000617482 CLUL1Q15846 466 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 TKFCQ3LXA3 575 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 SPDYCQ5MJ68 293 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 FAM160B2Q86V87 743 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 FAM71AQ8IYT1 594 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 ZNF564Q8TBZ8 553 aaPredicted RBP12.68□□□□□ -0.38
C11orf54-215ENST00000617482 TATDN2Q93075 761 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 RPS6KC1Q96S38 1066 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 KIFC3Q9BVG8 833 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 PCYOX1Q9UHG3 505 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 FEM1BQ9UK73 627 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 ZBTB12Q9Y330 459 aaPredicted RBP12.68□□□□□ -0.38
C11orf54-215ENST00000617482 CCDC169A6NNP5 214 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 DNM1LO00429 736 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 PODXLO00592 558 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 P4HA2O15460 535 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 RGS16O15492 202 aaPredicted RBP12.68□□□□□ -0.38
C11orf54-215ENST00000617482 RARAP10276 462 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 HSD17B4P51659 736 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 IRX3P78415 501 aaPredicted RBP12.68□□□□□ -0.38
C11orf54-215ENST00000617482 FMO1Q01740 532 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 TNIP1Q15025 636 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 DLGAP5Q15398 846 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 UGCGQ16739 394 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 ERMARDQ5T6L9 678 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 FAM102BQ5T8I3 360 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 GKAP1Q5VSY0 366 aaPredicted RBP12.68□□□□□ -0.38
C11orf54-215ENST00000617482 CCDC25Q86WR0 208 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 C3orf20Q8ND61 904 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 FAM151AQ8WW52 585 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 CCDC114Q96M63 670 aa12.68□□□□□ -0.38
C11orf54-215ENST00000617482 CNOT10Q9H9A5 744 aaKnown RBP12.68□□□□□ -0.38
C11orf54-215ENST00000617482 AGO4Q9HCK5 861 aaKnown RBP12.68□□□□□ -0.38
C11orf54-215ENST00000617482 MYH11P35749 1972 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 DRD4P21917 467 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 ADSSP30520 456 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 COILP38432 576 aaPredicted RBP12.67□□□□□ -0.38
C11orf54-215ENST00000617482 CAP2P40123 477 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 CDR1P51861 262 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 MRPS9P82933 396 aaKnown RBP12.67□□□□□ -0.38
C11orf54-215ENST00000617482 GTF2BQ00403 316 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 SNRNP35Q16560 246 aaKnown RBP12.67□□□□□ -0.38
C11orf54-215ENST00000617482 PLA2G4FQ68DD2 849 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 STYK1Q6J9G0 422 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 SLC13A5Q86YT5 568 aaPredicted RBP12.67□□□□□ -0.38
C11orf54-215ENST00000617482 EPS8L3Q8TE67 593 aaKnown RBP12.67□□□□□ -0.38
C11orf54-215ENST00000617482 CD101Q93033 1021 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 ZNF653Q96CK0 615 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 CHMP6Q96FZ7 201 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 WNT8AQ9H1J5 351 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 TOPORSQ9NS56 1045 aaPredicted RBP12.67□□□□□ -0.38
C11orf54-215ENST00000617482 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.67□□□□□ -0.38
C11orf54-215ENST00000617482 MTRF1LQ9UGC7 380 aaKnown RBP12.67□□□□□ -0.38
C11orf54-215ENST00000617482 DBR1Q9UK59 544 aaKnown RBP12.67□□□□□ -0.38
C11orf54-215ENST00000617482 PCDHA3Q9Y5H8 950 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 ZNF536O15090 1300 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 C21orf2O43822 256 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 MAPTP10636 758 aaKnown RBP12.67□□□□□ -0.38
C11orf54-215ENST00000617482 GZMAP12544 262 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 ALAS1P13196 640 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 CYP11B1P15538 503 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 HSPA6P17066 643 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 EIF2AK2P19525 551 aaKnown RBP12.67□□□□□ -0.38
C11orf54-215ENST00000617482 MFAP3P55082 362 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 MTMR1Q13613 665 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 ALCAMQ13740 583 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 PHLDB2Q86SQ0 1253 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 DHX38Q92620 1227 aaKnown RBP12.67□□□□□ -0.38
C11orf54-215ENST00000617482 PGM2Q96G03 612 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 CCDC113Q9H0I3 377 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 ADAM7Q9H2U9 754 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 MTUS1Q9ULD2 1270 aa12.67□□□□□ -0.38
C11orf54-215ENST00000617482 C5orf60A6NFR6 353 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 CLDN3O15551 220 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 ICAM1P05362 532 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 MYCLP12524 364 aaPredicted RBP12.66□□□□□ -0.38
C11orf54-215ENST00000617482 DGKZQ13574 1117 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 SNX1Q13596 522 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 TCEAL1Q15170 157 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 C12orf56Q8IXR9 622 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 C7orf43Q8WVR3 580 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 C1orf54Q8WWF1 131 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 CLEC4DQ8WXI8 215 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 VTI1AQ96AJ9 217 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 FAM84AQ96KN4 292 aa12.66□□□□□ -0.38
C11orf54-215ENST00000617482 FAM129AQ9BZQ8 928 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms