RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 POMGNT1Q8WZA1 660 aa22.58■■□□□ 1.21
LSM14A-202ENST00000540746 RUFY1Q96T51 708 aa22.58■■□□□ 1.21
LSM14A-202ENST00000540746 CARD9Q9H257 536 aa22.58■■□□□ 1.21
LSM14A-202ENST00000540746 SLITRK6Q9H5Y7 841 aa22.58■■□□□ 1.21
LSM14A-202ENST00000540746 CTTNBP2NLQ9P2B4 639 aa22.58■■□□□ 1.21
LSM14A-202ENST00000540746 SEPT9Q9UHD8 586 aaPredicted RBP22.58■■□□□ 1.21
LSM14A-202ENST00000540746 SSC5DA1L4H1 1573 aa22.58■■□□□ 1.21
LSM14A-202ENST00000540746 TTI1O43156 1089 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 SHOX2O60902 331 aaPredicted RBP22.57■■□□□ 1.2
LSM14A-202ENST00000540746 RTN2O75298 545 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 CLSTN1O94985 981 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 HSPA9P38646 679 aaKnown RBP22.57■■□□□ 1.2
LSM14A-202ENST00000540746 GPC3P51654 580 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 CUL1Q13616 776 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 TCEAL1Q15170 157 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 ZNF526Q8TF50 670 aaPredicted RBP22.57■■□□□ 1.2
LSM14A-202ENST00000540746 ACAD9Q9H845 621 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 CYP26B1Q9NR63 512 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 TMOD4Q9NZQ9 345 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 NFASCO94856 1347 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 SPDYE16A6NNV3 312 aaPredicted RBP22.57■■□□□ 1.2
LSM14A-202ENST00000540746 SPATA31C2B4DYI2 1134 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 ATMINO43313 823 aaPredicted RBP22.57■■□□□ 1.2
LSM14A-202ENST00000540746 DGAT1O75907 488 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 MMEP08473 750 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 MFAP3P55082 362 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 GPC5P78333 572 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 FMO1Q01740 532 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 CYP24A1Q07973 514 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 TMC2Q8TDI7 906 aa22.57■■□□□ 1.2
LSM14A-202ENST00000540746 HNRNPDLO14979 420 aaKnown RBP22.56■■□□□ 1.2
LSM14A-202ENST00000540746 COPB2P35606 906 aa22.56■■□□□ 1.2
LSM14A-202ENST00000540746 MARCKSL1P49006 195 aa22.56■■□□□ 1.2
LSM14A-202ENST00000540746 FSTL1Q12841 308 aa22.56■■□□□ 1.2
LSM14A-202ENST00000540746 AADACL2Q6P093 401 aa22.56■■□□□ 1.2
LSM14A-202ENST00000540746 SV2AQ7L0J3 742 aa22.56■■□□□ 1.2
LSM14A-202ENST00000540746 ADAT2Q7Z6V5 191 aaKnown RBP22.56■■□□□ 1.2
LSM14A-202ENST00000540746 FBXL13Q8NEE6 735 aa22.56■■□□□ 1.2
LSM14A-202ENST00000540746 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.56■■□□□ 1.2
LSM14A-202ENST00000540746 DHX38Q92620 1227 aaKnown RBP22.56■■□□□ 1.2
LSM14A-202ENST00000540746 KRT35Q92764 455 aa22.56■■□□□ 1.2
LSM14A-202ENST00000540746 ERVK-5Q9HDB9 667 aa22.56■■□□□ 1.2
LSM14A-202ENST00000540746 POLR2AP24928 1970 aaKnown RBP22.56■■□□□ 1.2
LSM14A-202ENST00000540746 DAPK3O43293 454 aa22.56■■□□□ 1.2
LSM14A-202ENST00000540746 DLATP10515 647 aaKnown RBP22.56■■□□□ 1.2
LSM14A-202ENST00000540746 C11orf63Q6NUN7 778 aa22.56■■□□□ 1.2
LSM14A-202ENST00000540746 APOBEC3FQ8IUX4 373 aaKnown RBP22.56■■□□□ 1.2
LSM14A-202ENST00000540746 MCPH1Q8NEM0 835 aa22.56■■□□□ 1.2
LSM14A-202ENST00000540746 SEC14L1Q92503 715 aa22.56■■□□□ 1.2
LSM14A-202ENST00000540746 TATDN2Q93075 761 aa22.56■■□□□ 1.2
LSM14A-202ENST00000540746 MTFR1LQ9H019 292 aa22.56■■□□□ 1.2
LSM14A-202ENST00000540746 RAB20Q9NX57 234 aa22.56■■□□□ 1.2
LSM14A-202ENST00000540746 DIS3Q9Y2L1 958 aaKnown RBP22.56■■□□□ 1.2
LSM14A-202ENST00000540746 PEX10O60683 326 aa22.55■■□□□ 1.2
LSM14A-202ENST00000540746 GZMAP12544 262 aa22.55■■□□□ 1.2
LSM14A-202ENST00000540746 CYP11B1P15538 503 aa22.55■■□□□ 1.2
LSM14A-202ENST00000540746 FLT3P36888 993 aa22.55■■□□□ 1.2
LSM14A-202ENST00000540746 SH2D3CQ8N5H7 860 aa22.55■■□□□ 1.2
LSM14A-202ENST00000540746 GGA3Q9NZ52 723 aa22.55■■□□□ 1.2
LSM14A-202ENST00000540746 ARHGAP28Q9P2N2 729 aa22.55■■□□□ 1.2
LSM14A-202ENST00000540746 ATP4AP20648 1035 aa22.55■■□□□ 1.2
LSM14A-202ENST00000540746 RTP1P59025 263 aa22.55■■□□□ 1.2
LSM14A-202ENST00000540746 BRDTQ58F21 947 aaPredicted RBP22.55■■□□□ 1.2
LSM14A-202ENST00000540746 KCTD16Q68DU8 428 aa22.55■■□□□ 1.2
LSM14A-202ENST00000540746 CD302Q8IX05 232 aa22.55■■□□□ 1.2
LSM14A-202ENST00000540746 GPD1LQ8N335 351 aa22.55■■□□□ 1.2
LSM14A-202ENST00000540746 POLR3FQ9H1D9 316 aaPredicted RBP22.55■■□□□ 1.2
LSM14A-202ENST00000540746 ATP6V0A4Q9HBG4 840 aa22.55■■□□□ 1.2
LSM14A-202ENST00000540746 AFG3L2Q9Y4W6 797 aa22.55■■□□□ 1.2
LSM14A-202ENST00000540746 LOC285556D6RIA3 1793 aa22.54■■□□□ 1.2
LSM14A-202ENST00000540746 TMEM110-MUSTN1A8MSY1 372 aa22.54■■□□□ 1.2
LSM14A-202ENST00000540746 PTENP60484 403 aa22.54■■□□□ 1.2
LSM14A-202ENST00000540746 UAP1Q16222 522 aaPredicted RBP22.54■■□□□ 1.2
LSM14A-202ENST00000540746 MTERF2Q49AM1 385 aa22.54■■□□□ 1.2
LSM14A-202ENST00000540746 MAATS1Q7Z4T9 603 aa22.54■■□□□ 1.2
LSM14A-202ENST00000540746 CPNE8Q86YQ8 564 aa22.54■■□□□ 1.2
LSM14A-202ENST00000540746 CCDC26Q8TAB7 109 aa22.54■■□□□ 1.2
LSM14A-202ENST00000540746 DDX1Q92499 740 aaKnown RBP22.54■■□□□ 1.2
LSM14A-202ENST00000540746 CDHR1Q96JP9 859 aa22.54■■□□□ 1.2
LSM14A-202ENST00000540746 NT5C1BQ96P26 610 aa22.54■■□□□ 1.2
LSM14A-202ENST00000540746 FAM213AQ9BRX8 229 aa22.54■■□□□ 1.2
LSM14A-202ENST00000540746 PI4K2AQ9BTU6 479 aa22.54■■□□□ 1.2
LSM14A-202ENST00000540746 DKC1O60832 514 aaKnown RBP eCLIP22.53■■□□□ 1.21e-42■■■■■ 42.1
LSM14A-202ENST00000540746 PRKG1Q13976 671 aa22.53■■□□□ 1.2
LSM14A-202ENST00000540746 DNAJC21Q5F1R6 531 aaKnown RBP22.53■■□□□ 1.2
LSM14A-202ENST00000540746 ZNF516Q92618 1163 aa22.53■■□□□ 1.2
LSM14A-202ENST00000540746 TRIM51Q9BSJ1 452 aa22.53■■□□□ 1.2
LSM14A-202ENST00000540746 WDR90Q96KV7 1748 aa22.53■■□□□ 1.2
LSM14A-202ENST00000540746 GRIN3BO60391 1043 aa22.53■■□□□ 1.2
LSM14A-202ENST00000540746 MTA2O94776 668 aa22.53■■□□□ 1.2
LSM14A-202ENST00000540746 CALCAP01258 141 aa22.53■■□□□ 1.2
LSM14A-202ENST00000540746 SUPT20HL2P0C7V6 817 aa22.53■■□□□ 1.2
LSM14A-202ENST00000540746 GARTP22102 1010 aa22.53■■□□□ 1.2
LSM14A-202ENST00000540746 HSD17B3P37058 310 aa22.53■■□□□ 1.2
LSM14A-202ENST00000540746 HIRAP54198 1017 aaPredicted RBP22.53■■□□□ 1.2
LSM14A-202ENST00000540746 CNTN2Q02246 1040 aa22.53■■□□□ 1.2
LSM14A-202ENST00000540746 SUPT20HL1Q3ZLR7 823 aa22.53■■□□□ 1.2
LSM14A-202ENST00000540746 PLAAQ9Y263 795 aa22.53■■□□□ 1.2
LSM14A-202ENST00000540746 STAM2O75886 525 aa22.52■■□□□ 1.2
LSM14A-202ENST00000540746 COMTP21964 271 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms