RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 TBX10O75333 385 aa30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 EDN1P05305 212 aa30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 PLS3P13797 630 aa30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 PLCG1P19174 1290 aa30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 DLX2Q07687 328 aaPredicted RBP30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 DUSP6Q16828 381 aa30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 DCAF4L1Q3SXM0 396 aa30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 NT5DC1Q5TFE4 455 aa30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 ATF7IP2Q5U623 682 aa30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 VPS52Q8N1B4 723 aa30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 SPIRE2Q8WWL2 714 aa30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 NECAB3Q96P71 396 aaPredicted RBP30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 NTPCRQ9BSD7 190 aaKnown RBP30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 FBXO2Q9UK22 296 aaPredicted RBP30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 MORC2Q9Y6X9 1032 aaPredicted RBP30.4■■■□□ 2.46
ATPAF1-201ENST00000329231 SMTNP53814 917 aa30.39■■■□□ 2.46
ATPAF1-201ENST00000329231 COLGALT2Q8IYK4 626 aa30.39■■■□□ 2.46
ATPAF1-201ENST00000329231 MRPL43Q8N983 215 aaKnown RBP30.39■■■□□ 2.46
ATPAF1-201ENST00000329231 USP28Q96RU2 1077 aa30.39■■■□□ 2.46
ATPAF1-201ENST00000329231 RPS6KC1Q96S38 1066 aa30.39■■■□□ 2.46
ATPAF1-201ENST00000329231 MIOSQ9NXC5 875 aa30.39■■■□□ 2.46
ATPAF1-201ENST00000329231 HIDE1A8MVS5 230 aa30.38■■■□□ 2.45
ATPAF1-201ENST00000329231 NRP1O14786 923 aa30.38■■■□□ 2.45
ATPAF1-201ENST00000329231 NR1I2O75469 434 aa30.38■■■□□ 2.45
ATPAF1-201ENST00000329231 DSC1Q08554 894 aa30.38■■■□□ 2.45
ATPAF1-201ENST00000329231 EEF1DP3Q658K8 133 aa30.38■■■□□ 2.45
ATPAF1-201ENST00000329231 GPBP1Q86WP2 473 aa30.38■■■□□ 2.45
ATPAF1-201ENST00000329231 BCL7CQ8WUZ0 217 aaPredicted RBP30.38■■■□□ 2.45
ATPAF1-201ENST00000329231 RAD54LQ92698 747 aa30.38■■■□□ 2.45
ATPAF1-201ENST00000329231 MRPL4Q9BYD3 311 aaKnown RBP30.38■■■□□ 2.45
ATPAF1-201ENST00000329231 ZBP1Q9H171 429 aa30.38■■■□□ 2.45
ATPAF1-201ENST00000329231 BLOC1S4Q9NUP1 217 aa30.38■■■□□ 2.45
ATPAF1-201ENST00000329231 KLK14Q9P0G3 267 aa30.38■■■□□ 2.45
ATPAF1-201ENST00000329231 ODF2LQ9ULJ1 636 aa30.38■■■□□ 2.45
ATPAF1-201ENST00000329231 TNFSF13BQ9Y275 285 aa30.38■■■□□ 2.45
ATPAF1-201ENST00000329231 SLC16A4O15374 487 aa30.37■■■□□ 2.45
ATPAF1-201ENST00000329231 GRIK3Q13003 919 aa30.37■■■□□ 2.45
ATPAF1-201ENST00000329231 DHX8Q14562 1220 aaKnown RBP30.37■■■□□ 2.45
ATPAF1-201ENST00000329231 SLC39A14Q15043 492 aa30.37■■■□□ 2.45
ATPAF1-201ENST00000329231 ARSHQ5FYA8 562 aa30.37■■■□□ 2.45
ATPAF1-201ENST00000329231 SPECC1Q5M775 1068 aa30.37■■■□□ 2.45
ATPAF1-201ENST00000329231 GSTCDQ8NEC7 633 aa30.37■■■□□ 2.45
ATPAF1-201ENST00000329231 EPSTI1Q96J88 318 aa30.37■■■□□ 2.45
ATPAF1-201ENST00000329231 SNTG2Q9NY99 539 aa30.37■■■□□ 2.45
ATPAF1-201ENST00000329231 LARSQ9P2J5 1176 aaKnown RBP30.37■■■□□ 2.45
ATPAF1-201ENST00000329231 CCDC39Q9UFE4 941 aa30.37■■■□□ 2.45
ATPAF1-201ENST00000329231 CD207Q9UJ71 328 aa30.37■■■□□ 2.45
ATPAF1-201ENST00000329231 NPHP3-ACAD11A0A0J9YXS1 232 aa30.36■■■□□ 2.45
ATPAF1-201ENST00000329231 C2orf71A6NGG8 1288 aa30.36■■■□□ 2.45
ATPAF1-201ENST00000329231 CXCL14O95715 111 aa30.36■■■□□ 2.45
ATPAF1-201ENST00000329231 SRGAP2BP0DMP2 458 aa30.36■■■□□ 2.45
ATPAF1-201ENST00000329231 IL9P15248 144 aa30.36■■■□□ 2.45
ATPAF1-201ENST00000329231 CA8P35219 290 aa30.36■■■□□ 2.45
ATPAF1-201ENST00000329231 TXLNAP40222 546 aa30.36■■■□□ 2.45
ATPAF1-201ENST00000329231 OR1G1P47890 313 aa30.36■■■□□ 2.45
ATPAF1-201ENST00000329231 GIT2Q14161 759 aa30.36■■■□□ 2.45
ATPAF1-201ENST00000329231 CLUL1Q15846 466 aa30.36■■■□□ 2.45
ATPAF1-201ENST00000329231 LRRC15Q8TF66 581 aa30.36■■■□□ 2.45
ATPAF1-201ENST00000329231 ACO2Q99798 780 aaKnown RBP30.36■■■□□ 2.45
ATPAF1-201ENST00000329231 CLEC1BQ9P126 229 aa30.36■■■□□ 2.45
ATPAF1-201ENST00000329231 RECQL4O94761 1208 aa30.35■■■□□ 2.45
ATPAF1-201ENST00000329231 GLP2RO95838 553 aa30.35■■■□□ 2.45
ATPAF1-201ENST00000329231 CTSAP10619 480 aa30.35■■■□□ 2.45
ATPAF1-201ENST00000329231 NASPP49321 788 aaPredicted RBP30.35■■■□□ 2.45
ATPAF1-201ENST00000329231 STRN3Q13033 797 aa30.35■■■□□ 2.45
ATPAF1-201ENST00000329231 MCM6Q14566 821 aa30.35■■■□□ 2.45
ATPAF1-201ENST00000329231 TAS1R3Q7RTX0 852 aa30.35■■■□□ 2.45
ATPAF1-201ENST00000329231 KRI1Q8N9T8 703 aaKnown RBP30.35■■■□□ 2.45
ATPAF1-201ENST00000329231 LARP4BQ92615 738 aaKnown RBP30.35■■■□□ 2.45
ATPAF1-201ENST00000329231 MSLNLQ96KJ4 702 aa30.35■■■□□ 2.45
ATPAF1-201ENST00000329231 ZNF396Q96N95 335 aaPredicted RBP30.35■■■□□ 2.45
ATPAF1-201ENST00000329231 CLIC6Q96NY7 704 aa30.35■■■□□ 2.45
ATPAF1-201ENST00000329231 PRG3Q9Y2Y8 225 aaPredicted RBP30.35■■■□□ 2.45
ATPAF1-201ENST00000329231 H0YCG3 227 aa30.34■■■□□ 2.45
ATPAF1-201ENST00000329231 DDIT3P35638 169 aa30.34■■■□□ 2.45
ATPAF1-201ENST00000329231 CACNB1Q02641 598 aaPredicted RBP30.34■■■□□ 2.45
ATPAF1-201ENST00000329231 SMAD4Q13485 552 aaKnown RBP30.34■■■□□ 2.45
ATPAF1-201ENST00000329231 USP49Q70CQ1 688 aa30.34■■■□□ 2.45
ATPAF1-201ENST00000329231 TMEM87AQ8NBN3 555 aa30.34■■■□□ 2.45
ATPAF1-201ENST00000329231 TMEM161BQ8NDZ6 487 aa30.34■■■□□ 2.45
ATPAF1-201ENST00000329231 REEP2Q9BRK0 252 aa30.34■■■□□ 2.45
ATPAF1-201ENST00000329231 BARX2Q9UMQ3 279 aaPredicted RBP30.34■■■□□ 2.45
ATPAF1-201ENST00000329231 IRAK3Q9Y616 596 aa30.34■■■□□ 2.45
ATPAF1-201ENST00000329231 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP30.33■■■□□ 2.45
ATPAF1-201ENST00000329231 KRT18P05783 430 aaKnown RBP30.33■■■□□ 2.45
ATPAF1-201ENST00000329231 COASYQ13057 564 aa30.33■■■□□ 2.45
ATPAF1-201ENST00000329231 STK38Q15208 465 aa30.33■■■□□ 2.45
ATPAF1-201ENST00000329231 TMEM184AQ6ZMB5 413 aa30.33■■■□□ 2.45
ATPAF1-201ENST00000329231 VN1R2Q8NFZ6 395 aa30.33■■■□□ 2.45
ATPAF1-201ENST00000329231 TARS2Q9BW92 718 aaKnown RBP30.33■■■□□ 2.45
ATPAF1-201ENST00000329231 COLEC11Q9BWP8 271 aa30.33■■■□□ 2.45
ATPAF1-201ENST00000329231 VN1R3Q9BXE9 311 aa30.33■■■□□ 2.45
ATPAF1-201ENST00000329231 STK17AQ9UEE5 414 aa30.33■■■□□ 2.45
ATPAF1-201ENST00000329231 GDAQ9Y2T3 454 aa30.33■■■□□ 2.45
ATPAF1-201ENST00000329231 MBTPS2O43462 519 aa30.32■■■□□ 2.44
ATPAF1-201ENST00000329231 FAM13AO94988 1023 aa30.32■■■□□ 2.44
ATPAF1-201ENST00000329231 KCNC3Q14003 757 aa30.32■■■□□ 2.44
ATPAF1-201ENST00000329231 ZNF568Q3ZCX4 644 aa30.32■■■□□ 2.44
ATPAF1-201ENST00000329231 FAM178BQ8IXR5 827 aa30.32■■■□□ 2.44
ATPAF1-201ENST00000329231 PTPRHQ9HD43 1115 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms